Metabolism Flashcards

An organism's metabolism transforms matter and energy, subject to the laws of thermodynamics. The free-energy change of a reaction tells us whether or not the reaction occurs spontaneously. ATP powers cellular work by coupling exergonic reactions to endergonic reactions. Enzymes speed up metabolic reactions by lowering energy barriers. Regulation of enzyme activity helps control metabolism

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1
Q

Metabolism

A

The totality of an organism’s chemical reactions, consisting of catabolic and anabolic pathways, which manage the material and energy resources of the organism

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2
Q

Metabolic Pathway

A

A series of chemical reaction s that either builds a complex molecule (anabolic pathway) or breaks down a complex molecule to simpler molecules (catabolic pathway)

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3
Q

Catabolic Pathway

A

A metabolic pathway that releases energy by breaking down complex molecules to simpler molecules

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4
Q

Anabolic Pathway

A

A metabolic pathway that consumes energy to synthesize a complex molecule from simpler molecules

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5
Q

Bioenergetics

A

The overall flow and transformation of energy in an organism

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6
Q

Energy

A

The capacity to cause change, especially to do work (to move matter against an opposing force)

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7
Q

Thermal Energy

A

Kinetic energy due to the random motion of atoms and molecules; energy in its most random form

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8
Q

Kinetic Energy

A

The energy associated with the relative motion of objects. Moving matter can perform work by impacting motion to other matter

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9
Q

Heat

A

Thermal energy in transfer from one body of matter to another

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10
Q

Potential Energy

A

The energy that matter possess as a result of its location or spatial arrangement (structure)

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11
Q

Chemical Energy

A

Energy available in molecules for release in a chemical reaction; a form of potential energy

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12
Q

Thermodynamics

A

The study of energy transformation that occur in a collection of matter

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13
Q

First Law of Thermodynamics

A

The principle of conservation of energy: Energy can be transferred and transformed, but it cannot be created or destroyed

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14
Q

Entropy

A

A measure of disorder, or randomness

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15
Q

Second Law of Thermodynamics

A

The principle stating that every energy transfer or transformation increases the entropy of the universe. Usable forms of energy are at least partly converted to heat

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16
Q

Spontaneous Process

A

A process that occurs without an overall input of energy; a process that is energetically favorable

17
Q

Free Energy

A

The portion of a biological system’s energy that can perform work when temperature and pressure are uniform throughout the system. The change in this in a system (change in G) is calculated by the equation change in G = change in H - T x change in S, where change in H is the change in enthalpy (in biological systems, equivalent to total energy), change in T is the absolute temperature, and change in S is the change in entropy

18
Q

Exergonic Reaction

A

A spontaneous chemical reaction in which there is a net release of free energy

19
Q

Endergonic Reaction

A

A non-spontaneous chemical reaction in which free energy is absorbed from the surroundings

20
Q

Energy Coupling

A

In cellular metabolism, the use of energy released from an exergonic reaction to drive an endergonic reaction

21
Q

ATP (Adenosine Triphosphate)

A

An adenine-containing nucleoside triphosphate that releases free energy when its phosphate bonds are hydrolyzed. This energy is used to drive endergonic reactions in cells

22
Q

Phosphorylated Intermediate

A

A molecule (often a reactant) with a phosphate group covalently bound to it, making it more reactive (less stable) than the unphosphorylated molecule

23
Q

Enzyme

A

A macromolecule serving as a catalyst, a chemical agent that increases the rate of a reaction without being consumed by the reaction. Most are proteins

24
Q

Catalyst

A

A chemical agent that selectively increases the rate of a reaction without being consumed by the reaction

25
Q

Activation Energy

A

The amount of energy that reactants must absorb before a chemical reaction will start; also called free energy of activation

26
Q

Substrate

A

The reactant on which an enzyme works

27
Q

Enzyme-Substrate Complex

A

A temporary complex formed when an enzyme binds to its substrate molecule(s)

28
Q

Active Site

A

The specific region of an enzyme that binds the substrate and that forms the pocket in which catalysis occurs

29
Q

Induced Fit

A

Caused by entry of the substrate, the change in shape of the active site of an enzyme so that it binds more snugly to the substrate

30
Q

Cofactors

A

Any nonprotein molecule or ion that is required for the proper functioning of an enzyme. They can be permanently bound to the active site or may bind loosely and reversibly, along with the substrate, during catalysis

31
Q

Coenzyme

A

An organic molecule serving as a cofactor. Most vitamins function as them in metabolic reactions

32
Q

Competitive Inhibitor

A

A substance that reduces the activity of an enzyme by entering the active site in place of the substrate, whose structure it mimics

33
Q

Noncompetitive Inhibitor

A

A substance that reduces the activity of an enzyme by binding to a location remote from the active site, changing the enzyme’s shape so that the active site no longer effectively catalyzes the conversion of substrate to product

34
Q

Allosteric Regulation

A

The binding of a regulatory molecule to a protein at one site that affects the function of the protein at a different site

35
Q

Cooperativity

A

A kind of allosteric regulation whereby a shape change in one subunit of a protein is caused by substrate binding is transmitted to all the other subunits, facilitating binding of additional substrate molecules to those subunits

36
Q

Feedback Inhibition

A

A method of metabolic control in which the end product of a metabolic pathway acts as an inhibitor of an enzyme within that pathway