membrane structure, function and transport Flashcards
what is the simplest collection of matter that can be considered a living entity
a cell
how does a light microscope work
visible light is passed through the specimen and then through the glass lenses. the lenses refract the light so that the image is projected into the eye or into the camera
what are the 3 important parameters in microscopy
resolution
magnification
contrast
what is magnification
the ratio of an objects image size to its real size
what is resolution
a measure of the clarity of the image - it is the minimum distance two points can be separated and still be distinguished as separate points
the light microscope cannot resolve detail finer than …….……. micrometres regardless of the magnification
0.2
what is contrast
the difference in brightness between the light and dark areas of an image
how can contrast be enhanced
we can stain certain components of the specimen to make them stand out
how does the electron microscope work
it focusses a beam of electrons through the specimen or onto its surface
…….………. is inversely related to the wavelength of light (or electrons) a microscope uses for imaging
resolution
electron beams have much longer/shorter wavelengths than visible light
shorter
what is the highest resolution an electron microscope can achieve
2 nm
what is a scanning electron microscope used for
useful for detailed study of topography of a specimen
how does a scanning electron microscope SEM work
the electron beam scans the surface of the sample, usually coated with a thin film of gold
the beam excites electrons on the surface and these secondary electrons are detected by a device that translates the pattern of electrons into an electronic signal sent to a video screen
the result is a 3D image of the specimen
how does a transmission electron microscope TEM work
it aims a beam of electrons through a very thin section of the specimen
the specimen has been stained with atoms of heavy metals which attach to certain cellular structures, enhancing the electron density of some parts of the cell compared to others
the electrons passing through the specimen are scattered more in the denser areas, so fewer are transmitted
the image displays a pattern of transmitted electrons
what is a transmission electron microscope used for
it is used to study the internal structure of cells
what kind of lenses do SEM and TEM use and why
they use electromagnets as lenses to bend the paths of the electrons ultimately focusing the image onto a monitor for viewing
what is a disadvantage of the electron microscope
methods used to prepare the specimen kills the cells
specimen preparation for any kind of microscopy can introduce artefacts. what are these
structural features seen in micrographs that do not exist in the living cell
microscopes are the most important tools for which field of study
cytology - the study of cell structure
what is biochemistry
the study of the chemical processes (metabolism) of cells
what is cell fractionation
a technique used to study the structure and function of cells
it takes apart and separated major organelles and other subcellular structures from one another
the piece of equipment used is called a centrifuge
at lower speeds the pellet consists of larger components
at higher speeds the pellet consists of smaller components
what is the difference between stains used for light and electron microscopy
light microscopy stains are coloured molecules that bind to cell components, affecting the light passing through
stains for electron microscopy involve heavy metals that affect the beams of electrons
eukaryotic cells have internal ………… that compartmentalize their functions
membranes
what are the 2 distinct types of cells
prokaryotes and eukaryotes
organisms of the domains bacteria and archaea consist of what type of cells
prokaryotes
protists, fungi, animals and plants all consist of what type of cells
eukaryotes
all cells are bonded by what kind of membrane
plasma membrane
inside all cells is a semifluid, jelly like substance called what
the cytosol - where glycolysis happens - where cellular components are suspended
TRUE/FALSE all cells contain chromosomes
TRUE - they carry genes in the form of DNA
TRUE/FALSE all cells contain ribosomes
TRUE
what are the major differences between eukaryotes and prokaryotes
location of DNA - in E most of the DNA is found in the nucleus which is bounded by a double membrane. in P DNA is concentrated in a region that is not membrane enclosed, called the nucleoid
almost all prokaryotes lack the organelles with specialised structure and function that eukaryotes have
the interior of both eukaryotic and prokaryotic cells is called what
the cytoplasm
in eukaryotes this is the region between the nucleus and the plasma membrane
instead of membranes some prokaryotes have internal regions surrounded by what within which specific reactions take place
proteins
eukaryotic cells are generally much larger/smaller than prokaryotes
larger
what is the typical diameter of bacteria cells
1-5 micrometres
what is the typical diameter of eukaryotic cells
10-100 micrometres
as a cell increases its size its surface area grows proportionally less/more compared to its volume
less
a smaller/larger object has greater surface area to volume ratio
smaller object
many cells have long thin projections called microvilli why are these useful
they increase surface area without an appreciable increase in volume
what are the advantages of having organelles
they provide microenvironments that support specific metabolic functions
they allow reactions that are not compatible to occur simultaneously within the cell
why do plasma membranes and organelle membranes participate directly in the cell’ metabolism
because they have many enzymes built into the membranes
what is the basic fabric of most membranes
the phospholipid bilayer with proteins embedded in it
what part of a eukaryotic cell contains most of the genes
the nucleus - some genes are located in the mitochondria and chloroplasts
what is the pore complex of the nuclear membrane
the nuclear envelope is perforated by pore structures - the pore complex is an intricate protein structure that lines each pore
it plays an important role in the cell by regulating the entry and exit of proteins, RNAs, large complexes and macromolecules
apart from at the pores, the nuclear side of the envelope is lined by what
the nuclear lamina - a netlike array of protein filaments that maintains the shape of the nucleus by mechanically supporting the nuclear envelope
how is DNA organised in the nucleus
into units called chromosomes
the complex of DNA and proteins making up the chromosomes is called what
the chromatin
what is the prominent structure in the non dividing nucleus
nucleolus
- where rRNA is synthesised from instructions in the DNA
- proteins imported from the cytoplasm are assembled with rRNA into large and small subunits of ribosomes. these subunits then exit the nucleus through the pores in to the cytoplasm where a ribosome can be assembled
the nucleus directs protein synthesis by synthesising what according to instructions provided by DNA
mRNA
how is mRNA transported to the cytoplasm from the nucleus
via the nuclear pores
what are ribosomes made of
rRNA
why are ribosomes not considered as organelles
because they are not membrane bounded
what are the 2 cytoplasmic locales where ribosomes build proteins
free ribosomes are suspended in the cytosol
bound ribosomes are attached to the outside of the ER or nuclear envelope
TRUE/FALSE bound and free ribosomes are structurally identical
TRUE - ribosomes can play either role at different times
most proteins made on free ribosomes function where
the cytosol
bound proteins generally make proteins that function where
they are inserted into membranes for packaging within certain organelles or for export from the cell
what does the endomembrane system include
it includes the ER, nuclear envelope, Golgi apparatus, lysosomes, various kinds of vesicles and vacuoles and the plasma membrane
what tasks does the endomembrane system carry out
synthesis of proteins
transport of proteins into membranes and organelles or out of the cell
metabolism and movement of lipids
detoxification of poisons
the membranes of the endomembrane system are related either through direct physical continuity or by the transfer of membrane segments as tiny vesicles. What are vesicles
sacs made from membrane
are the membranes of the endomembrane system identical
no - moreover, the thickness, composition and types of reaction of a membrane are not fixed and may be modified several times
what is the ER made of
a network of membranous tubules and sacs called cisternae
the ER membrane separates the ER lumen or cisternal space from the cytosol
the space between the 2 membranes of the nuclear envelope is continuous with the lumen of the ER
what are the 2 distinct regions of the ER
smooth ER
rough ER
what does the surface of smooth ER lack
ribosomes
ribosomes are studded on the outer surface of which type of ER
rough
…….……….. are attached to the cytoplasmic side of the nuclear envelopes outer membrane, which is continuous with the ER
ribosomes
what are the functions of the smooth ER
contribute in: synthesis of lipids metabolism of carbohydrates detoxification of drugs and poisons storage of calcium ions
detoxification of drugs by the ER usually involves adding which functional group
hydroxyl groups - this makes them more soluble in water and easier to flush out
what are the functions of the rough ER
proteins enter the ER from bound ribosomes and form glycoproteins by attaching carbohydrates. the ER keeps these proteins separate from the proteins in the cytosol produced by free ER. the secretory proteins depart form the ER in vesicles from a region called the transitional ER
rough ER is a membrane factory for the cell - it grows by adding membrane proteins and phospholipids into its own membrane. as polypeptides destined to be membrane proteins grow from the ribosomes they are inserted into the ER membrane
phospholipid synthesis - ER membrane enzymes synthesis phospholipids from precursors in the cytosol
most secretory proteins are what type of protein
glycoproteins - proteins with carbohydrates covalently bonded to them
what are vesicles in transit from one part of the cell to another called
transport vesicles
after leaving the ER where do many of the transport vesicles travel
to the Golgi apparatus
what happens to products of the ER in the Golgi apparatus
they are modified and stored and sent to other locations
what are the flat membranous sacs called that make up the Golgi apparatus
cisternae
the membrane of each cisterna in the Golgi apparatus separates tits internal space form what
the cytosol
what are the 2 sides of a Golgi stack referred to as
the cis and trans faces which act as the receiving and shipping departments respectively
how does a transport vesicle that has bud from the ER add its lumen contents to the Golgi apparatus
it fuses with the Golgi membrane on the cis side
how do vesicles leave the Golgi apparatus to go to other locations
they leave via the trans side
give some examples of the tweeking that the Golgi apparatus does to products of the ER
remove and substitute sugar monomers
alter membrane phospholipids