M5 - Photosynthesis and Respiration Flashcards

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1
Q

Photosynthesis involves a number of _______ that absorb _____ energy.

Only chlorophyll participates directly in photosynthesis. It mainly absorbs ____ and ____ light. It reflects ____ light.

________ pigments can absorb wavelengths of light that chlorophyll cannot.

A

pigments
light
red and blue
green
Accessory Pigments

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2
Q

What do accessory pigments do?

What may shade tolerant plants also contain?

A

They pass light energy (photons) to chlorphyll a, broadening the spectrum that allow photosynthesis to take place.

Shade tolerant plants may also contain ANTHOCYANINS (red or purple pigments) thought to protect chloroplasts from brief exposure to high light levels.

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3
Q

What is the link between photosynthesis and respiration?

A

PHOTOSYNTHESIS provides the O2 and carbohydrates, proteins and fats either directly or indirectly for cellular respiration.

Waste products of cellular respiration (CO2 + H2O) are used by chloroplasts as raw materials for photosynthesis.

Chemical elements to life are recycled but energy is not - it flows into an ecosystem as sunlight and back out as heat.

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4
Q

What is chlorophyll ionisation?

A

Light energy excites electrons which are released, leaving +ve ions.

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5
Q

Describe the process of the light-dependent reaction of photosynthesis.

A

Chlorophyll molecules in the thylakoid membranes absorb light energy and become excited.
- Excited electrons are emitted from the chlorophyll molecule, which becomes photoionised.

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6
Q

Describe the process of Non-cyclic Photophosphorylation.

A

1) Photolysis
2) Electrons in PS II are excited and are transferred along a chain of electron carriers to PS I (to replace emitted excited electrons).
3) As electrons are carried along the electron transport chain energy is lost and is used to pump H+ across the thylakoid membrane.
4) H+ ions diffuse down a concentration gradient back across the membrane through ATP synthase, synthesising ATP (chemiosmosis).
5) Excited electrons from PS I are accepted by an electron carrier and transferred to NADP. H+ from water are also transferred to NADP - forming reduced NADP (NADPH).

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7
Q

What is chemiosmosis?

A

The flow of H+ ions down a conc gradient through ATP synthase forming ATP from ADP + Pi.

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8
Q

What is photolysis?

A

The splitting of water using light energy.

  • Electrons from water molecules replace those lost from PS II.
  • H+ ions and O2 gas released (O2 diffused through membrane because small).
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9
Q

Describe photosystems.

A

They contain pigments arranged in a funnel-shaped light harvesting cluster.
Pigments are held in place by proteins in the membrane.

Accessory pigments absorb photons of light and transfer the energy to the primary pigment (Chlorophyll a) - also known as the reaction centre.

There are two main photosystems: PS II and PS I.

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10
Q

Describe Cyclic photophosphorylation

A
  • Only PSI involved.
  • The electrons emitted from PSI are passed to a higher energy level where they are received by a second electron acceptor.
  • Electrons then pass along a chain of electron carriers and return to PSI.
  • This releases energy to form ATP.
  • No reduced NADPH is made in this process.

(Refer to notes on Z-scheme - do not need to know, but need to understand).

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11
Q

What does the Calvin cycle do? Where does it occur? What does it require?

A

Metabolic pathway - reducing CO2 to carbohydrates (gaining H).

Occurs in the stroma of chloroplast.

Required ATP and NADPH from the light dependent reactions.

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12
Q

Describe the steps involved in the Calvin Cycle (one cycle).

A

Rubisco fixes CO2 and combines it with Ribulose Bisphosphate (RuBP) 5C to form 2 x Glycerate-3-phosphate (GP). 2x3C

GP is reduced to form 2 x Triose phosphate (TP) 2x3C and converting ATP –> ADP + Pi and NADPH –> NADP.

1/6 of C of TP goes to form organic molecules (e.g. glucose - 6 turns of the cycle needed)

5/6 of C of TP goes on to regenerate ribulose bisphosphate using ATP.

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13
Q

How many Calvin cycle turns are required to from 1 glucose molecule?

A

6 turns

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14
Q

What organic molecules can be produced from Triose Phosphate?

A

Monosaccharides, Disaccharides, Polysaccharides
Lipids, Proteins

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15
Q

What are the 3 main limiting factors of photosynthesis?

A
  • Light intensity
  • Temperature
  • CO2 Concentration
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16
Q

Describe the effect of increased CO2 concentration.

A

As CO2 conc increases, rate of photosynthesis increases.
Because… increased rate of L-I reactions providing no other factor is limiting (e.g. low light causing stomata to close).

CO2 is limiting factor initially and then other factors become limiting factor when graph plateaus.

17
Q

Describe the effect of light intensity on photosynthesis.

A

Increasing light intensity increases the rate of photosynthesis.

increases light intensity increases photoionisation and photolysis and so increased production of ATP and NADPH for L-I reaction.

Light causes stomata to open so CO2 can enter the leaf.

18
Q

Describe the effect of temperature on photosynthesis.

A

Increased movement of H+ ions and production of ATP and NADPH, affecting both LD and LI reactions.

Increasing temperature increases enzyme controlled reactions up to optimum temperature. Above optimum temp, rate falls due to enzymes working less efficiently/denaturing. (ATP synthase, Rubisco)

Higher temp increases rate of transpiration which may lead to the closure of the stomata and decrease uptake of CO2 (limiting LI reaction).

19
Q

Describe how pigments are separated using chromotography.

A
  • Chromatography paper suspended in a solvent - solvent level below line/origin (2cm).
  • Solvent moves up paper, serparating out pigments into individual colours.
  • Paper removed before solvent reaches the top (1cm).
  • A line is drawn along the solvent front.
20
Q

How do you measure the rate of photosynthesis? (experiment)

A

Photosynthometer set up. (capillary tube connected to a syringe and scale - immersed in test tube).

Test tube containing waterweed and potassium hydrogencarbonate solution (providing CO2) immersed in a water bath to maintain contant temperature.

Plant kept in dark for two hours before experiment.

Light source switched on and left for 30 mins to allow air spaces in leaves to fill with O2.

O2 released by plant during photosynthesis and collects iin funnel end of capillary tube above plant. After 30 mins O2 is gently drawn up the capillary tube by withdrawing syringe until volume can be measured on scale (mm^3). Gas produced is then measured in a set amount of time.

Experiment repeated with varying conditions.

21
Q

What is a coenzyme? What are the examples in respiration?

A

An electron carrier - NAD, FAD and Coenzyme A

22
Q

Name the stages of Respiration and where they take place.

A

Glycolysis - Cytoplasm of cell

Link Reaction - matrix

Krebs Cycle - Matrix

Oxidative Phosphorylation - on the cristae.

23
Q

Describe Glycolysis. What are the overall products?

A

One molecule of Glucose (6C) is phosphorylated to Glucose (Bis)Phosphate (6C). Using 2xATP.

This is unstable so splits into 2 x Triose phosphate (3C)
TP is then oxidised to Pyruvate, reducing NAD and forming two ATP molecules each (4xATP)

Net gain of 2 ATP, 2 NADH and 2 Pyruvate.

24
Q

What happens to Pyruvate after glycolysis?

A

It is actively transported into the mitochondrial matrix.

25
Q

Describe the Link Reaction. What are the overall products?

A

Each pyruvate is oxidised to acetate (2C). A CO2 molecule is lost and 1NAD–>NADH.
Acetate combines with Coenzyme A to produce Acetylcoenzyme A.

This happens X2 due to 2 pyruvate molecules.

PRODUCTS: 2 CO2, 2NADH and 2 Acetlycoenzyme A

26
Q

What does Acetylcoenzyme A do?

A

It delivers acetate to the Krebs Cycle.

27
Q

Describe the Krebs cycle.

A

Acetylcoenzyme A combines with a 4C acceptor molecule releasing CoA and 6 carbon intermediate.

6C intermediate is decarboxylated (2 CO2) and oxidised to give a 4C intermediate. 2 NAD are reduced and 1 ATP produced by substrate level phosphorylation.

4C intermediate recycle to 4C acceptor molecule by reducing 1NAD and 1FAD.

28
Q

What are the overall products of the Krebs Cycle PER GLUCOSE molecule?

A

4 x CO2
2 x ATP
6 x NADH
2 x FADH

29
Q

Why is glucose broken down a small amount at a time?

A

To avoid killing the cell by heat (releasing too much energy).

30
Q

Describe Oxidative phosphorylation via the electron transfer chain.

A

NADH donates electrons to the first molecule in the electron transfer chain (during glycolysis).
FADH donates electrons to the second molecule in the chain.

The electrons pass along a chain of electron carrier molecules. At the end of the chain electrons combine with H+ ions and O2 to form water.
[O2 is the final electron acceptor in the electron transfer chain] - LEARN.

CHEMIOSMOSIS
As electrons flow through the ETC the energy they release is used to actively transport H+ ions across the Cristae membrane (into inter-membrane space).
H+ then diffuses back into the matrix through ATP synthase. ADP is phophorylated by oxidative phosphorylation.

For each NADH, 3 protons pumped into inter-membrane space so 3 ATP molecules produced.

For each FADH, 2 protons are pumped so 2 ATP molecules produced.

31
Q

What are the products from the Electron Transfer chain?

A

34 ATP - 10x3 (NADH) + 2x2 (FADH)
10 NAD and 2 FAD
H2O

32
Q

What is the overall ATP yield per glucose in respiration? Why is this only theoretical?

A

38 ATP - 2 from glycolysis, 2 from Krebs cycle, 34 from ETC.

  • Pyruvate actively transported into matrix.
  • Some energy lost as heat
  • Some reduced coenzymes may be used in other reactions and not make it to the ETC.
33
Q

What cannot take palce in respiration without O2? Why?

A

Link Reaction and Krebs cycle - no FAD or NAD available to be reduced

34
Q

Describe anaerobic respiration in Mammals. What are the overall products?

A

Glycolysis still occurs (producing 2ATP, 2NADH and 2 Pyruvate from 1 Glucose).

LACTATE PATHWAY:
Each Pyruvate is converted to 1 lactate by enzyme lactase dehydrogenase. NADH is oxidised back to NAD, allowing glycolysis to contiune.

Overall products: 2 ATP, 2 NAD and 2 Lactate

35
Q

Describe anaerobic respiration in Yeast. What are the overall products?

A

Glycolysis.

ETHANOL PATHWAY:
Pyruvate is decarboxylated by pyruvate decarboxylase (1 CO2) to form ethanal. Ethanal is converted to ethanol by dehydrogenase, oxidising NADH to NAD.

Overall Products: 2 ATP, 2 CO2, 2 NAD, 2 Ethanol

36
Q

Compare aerobic and anaerobic respiration.

A

AEROBIC
- 38 ATP produced
- Cytoplasm and Mitochondrial matrix
- (10 NADH, 2 FADH)

ANAEROBIC
- 2 ATP produced
- Cytoplasm
- 2 ethanol/lactate + 2 NAD

37
Q

How do you record the rate of respiration for mammels? (experiment)

A

Test tube containging woodlice on a gauze - immersed in a water bath to provide optimum temperature. Bottom of test tube filled with KOH solution. Test tube attached to a syringe and a capillary tube filled with coloured fluid with a scale.

Control tube set up containing glass beads instead of woodlice.

Woodlice respire - releasing CO2, which is absorbed by the KOH. O2 is consumed so volume of air decreases, reducing pressure in test tube causing the coloured fluid in capilalry tube to move.

Readings taken over a set period of time. Repeated and a mean volume of O2 is calculated.

38
Q

How do you test rate of respiration for yeast? (experiment)

A

AEROBIC
- Test tube with buffer and substrate solution (e.g. glucose) connected to a gas syringe and placed in a water bath. Add yeast culture and set syringe to zero.
- As yeast respire, CO2 released and travels up into syringe.
- Measure CO2 volume at set time intervals. Repeat and calculate mean.
- Control experiment should also be set up with no yeast.

ANAEROBIC
- Same as above, just add a little liquid parafin so it settles on and completely covers surface of solution. This will stop O2 getting in,

Note: could also bubble through lime water and count bubbles

39
Q

Why does the apparatus for investigating respiration in mammels need to be left for 10mins? (3 reasons)

A
  • To allow pressure change in apparatus
  • Equilibrium reached
  • Allow respiration rate of woodlice to stabalise.