[M] Lec 05: Molecular Diagnostics (Central Dogma) Flashcards
Refers to:
- Double stranded, deoxyribose sugar
- FUNCTION: It carries primary genetic information within chromosomes.
- It is composed of two (2) polynucleotide chains which coil around each other to form a double helix.
- It is made up of repeating sugar-phosphate-sugar-phosphate residues.
DNA
Refers to:
- Single stranded, ribose sugar
- An intermediate nucleic acid
- It converts genetic information encoded within DNA into CHON
- It is a single polynucleotide chain
RNA
DNA base pairs
Adenine - Thymine
Guanine - Cytosine
DNA purines and pyrimidines
Purines: Adenine and Guanine
Pyrimidines: Thymine and Cytosine
RNA purines and pyrimidines
Purines: Adenine and Guanine
Pyrimidines: Uracil and Cytosine
Base pairs
- 2 hydrogen bonds
- 3 hydrogen bonds
- A:T
- G:C
Nucleotide structure
- Carries the nitrogen base
- Essential for connecting nucleotides together into a DNA chain
A. 3’ carbon-hydroxyl group on sugar
B. 5’ carbon on phosphate group
C. 1’ carbon on sugar
- C
- A and B
Steps of DNA replication
- Initiation
- Elongation
- Termination
DNA replication
- DNA polymerase will attach to unzip the strand of DNA to start new synthesis of DNA strands that is complementary to the strand
template and adds nucleotides in 5’ to 3’
direction. - DNA replication starts at a specific point (origin).
- No more DNA template strand left to replicate
- Elongation
- Initiation
- Termination
Enzymes involved during initiation DNA replication
- Unwinds the double stranded DNA helix
- Once separated, it exposes the base pair
which is used as template for replication.
DNA Helicase
Enzymes involved during initiation DNA replication
It is synthesized from 5’ to 3’ direction,
extending the primer by adding free
nucleotides to the 3’ end.
DNA Polymerase
Enzymes involved during initiation DNA replication
It produces a small RNA primer, which acts
as a ‘kick-starter’ for DNA polymerase
DNA Primase
Elongation DNA replication
Define
- Newly formed DNA strand
- Discontinuous replication strand in 5’ direction to 3 direction, away from the fork.
- Short segments of newly synthesized DNA that is found in the lagging strand.
- An enzyme that bind together new created fragment to form a strand.
- Leading strand
- Lagging strand
- Okazaki fragments
- DNA ligase
Translation or Transcription
- The process of creating a strand of mRNA contain genetic information within DNA and expressed as a protein
- The encoded genes in mRNA are translated into AA (amino acid) sequence in ribosomes
- There is synthesis.
- Occurs in ribosomes
- Occurs in NUCLEUS
- Transcription
- Translation
- Translation
- Translation
- Transcription
Steps in DNA Transcription
- Initiation
- Elongation
- Termination
DNA transcription
- Once DNA bases are separated, bases are expose on each strand if the DNA. Then, the enzyme (RNA) can then “read” the (nitrogenous) bases in one of the DNA strands.
- The enzyme will then make mRNA (messenger RNA) strand is made that is complementary to the sequence of the bases in the strand of DNA
Initiation
DNA transcription
Addition of nucleotide to the mRNA strand
Elongation
DNA transcription
- It occurs when RNA polymerase crosses or encountered a stop sequence (UAA, UAG, UGA) in the gene.
- In this phase, the mRNA strand is complete, and it detaches from DNA.
Termination
DNA transcription (Elongation)
- Strand where new mRNA is derived from. It
is responsible for creating new RNA molecules. - Nontemplate strand; it is not being transcribed into mRNA. It involves the enzyme RNA polymerase which uses ribonucleotides to form the new mRNA strand.
- Template strand
- Coding strand
Steps in DNA translation
- Initiation
- Elongation
- Termination
Steps/phase in DNA translation
- The methionine moves from the P site going to the A site to bond to a new amino acid. There is now an _______ of the peptide sequence, then followed by growth of peptide.
- One of the stop codons (UAA, UAG, UGA) it must enter the A site.
- Recognize the start codon
- Elongation
- Termination
- Initiation
Stop codons
UAA, UAG, UGA
- Holds the peptide chain
- Accepts the trNA
- P site
- A site
Start codon
Methionine