Longer Processes Flashcards
describe the induced fit model of enzyme action
- substrate binds to active site
- enzyme active site changes shape to substrate
- puts pressure on bonds and bends them
- lowers activation energy
- products removed and enzyme returns to original shape
describe the process of semi-conservative replication
- DNA helicase breaks hydrogen bonds between complementary base pairs between the polynucleotide strands causing the DNA double helix to unravel
- each separated parental DNA strand acts as a template
- free floating DNA nucleotides within the nucleus are attracted to the complementary base pairs on the template strands
- adjacent nucleotides joined together by condensation reaction to form phosphodiester bonds - catalysed by DNA polymerase
- hydrogen bonds form between bases of original and new strands
outline what happens in prophase
- chromosomes condense and become visible
- nucleolus disappears
- centrioles separate and move towards opposite poles of cell (animals only)
outline what happens in metaphase
- chromosomes align along equator of cell
- spindle fibres released from poles attach to centromere + chromatids
outline what happens in anaphase
- spindle fibres retract and pull the centromere + chromatids they are bound to towards opposite poles - requires ATP
- causes centromere to divide in 2
outline what happens in telophase and cytokinesis
- chromosomes become longer and thinner again
- spindle fibres disintegrate + nucleolus starts to reform
- cytoplasm divides in 2
outline the cotransport of glucose and sodium ions in the ileum
- Na ions actively transported out of epithelial call and into blood, reducing conc of Na ions in epithelial cell
- Na ions diffuse from lumen down conc gradient and into epithelial cell
- Na ions diffuse through a cotransporter protein, so either glucose or amino acids also attach + are transported into epithelial cell against their conc gradient
- glucose moves by facilitated diffusion from epithelial cell and into blood
outline the process of phagocytosis
- chemicals/debris released by pathogens attract phagocytes causing them to move toward cells
- phagocytes attach to the chemicals via receptors
- phagocytes change shape to move around + engulf pathogen
- pathogen is contained within a phagosome vesicle
- a lysosome within the phagocyte will fuse with the phagosome + release its contents
- lysozyme enzyme is released into the phagosome
- pathogen is destroyed
- soluble products are absorbed and used by phagocyte
outline the process of cell-mediated response
- once pathogen engullfed + destroyed by phagocyte, the antigens are positioned on the cell surface - is now an APC
- helper T cells attach to the antigens via receptors
- once attached, this stimulates the helper T cells to divide by mitosis, producing large numbers of clones
- cloned helper T cells differentiate into different cells
outline the process of humoral response
- antigens in blood collide with complementary antibody on B cell
- B cell takes in antigen by endocytosis + presents it on cell surface
- B cell collides with helper T cell receptor, which activates B cell to go through clonal selection
- B cells undergo mitosis to make large numbers of cells which then differentiate into memory or plasma cells
- plasma cells make antibodies
- B memory cells can divide rapidly into plasma cells when reinfected with same pathogen to make large numbers of antibodies rapidly
outline the replication of HIV in helper T cells
- HIV transported around in blood until it attaches to a CD4 protein on the helper T cells
- HIV protein capsule fuses with helper T cell membrane, enabling the RNA and the enzymes (reverse transcriptase) from HIV to enter
- reverse transcriptase copies the viral RNA into a DNA copy + moves to the helper T cell nucleus
- here, mRNA is transcribed + the helper T cell starts to create viral proteins to make new virus particles
outline the process of the ELISA test
- virus proteins (antigens) are added to well of a 96 well plate
- the antigens bind to the plastic, coating the bottom of the wells
- the primary antibody is added to the well - these are from the patient’s serum sample
- excess antibodies washed away, leaving only antibodies bound to the antigens - prevents non-specific binding
- a secondary antibody complementary to the first is added to the wells, also has an enzyme attached
- excess secondary antibody washed away, removing any unbound antibodies
- substrate added to wells
- secondary antibody containing enzyme will cause a colour change when exposed to the substrate
- presence of colour indicates presence of antibodies in test sample, meaning the patient will have been exposed to the antigen
outline the process of inspiration
- external intercostal muscles contract, pulling ribs upwards and outwards
- internal intercostal muscles relax
- diaphragm contracts downwards from dome position
- lung volume increases
- air pressure in lungs (pulmonary pressure) is lower in comparison to atmospheric pressure
- air moves into lungs from atmospheric pressure to lower pressure
outline the process of expiration
- external intercostal muscles relax
- internal intercostal muscles contract, pulling ribs downwards and inwards
- diaphragm relaxes + returns from dome position
- air pressure in lungs (pulmonary pressure) is higher in comparison to atmospheric pressure
- lung volume decreases to increase the pressure
- air moves out of lungs
outline the movement of water up the xylem
- water evaporates out of stomata - loss of water creates a lower pressure and lowers water potential
- water is pulled up by the xylem to replace it due to the negative pressure
- cohesion created by hydrogen bonds causes water to form a column within the xylem
- water molecules adhere to the walls of the xylem which helps to pull the water column upwards
- pulling up of water creates tension, pulling the xylem in to become narrower, which increases the root pressure so more water is drawn up
Describe the cohesion-tension theory of water transport in the xylem
- water lost from leaf due to transpiration
- this lowers the water potential of leaf cells
- water pulled up the xylem creating tension
- water molecules cohere by hydrogen bonds
- this forms a continuous water column
- water molecules adhere to the walls of the xylem, helps to pull column upwards
- pulling up of water creates tension, pulling the xylem in to become narrower - increases root pressure so more water drawn up
outline the process of transcription
- DNA helicase breaks hydrogen bonds between bases, helix unwinds and bases are exposed
- only one strand of the DNA acts as a template
- free mRNA nucleotides in nucleus align opposite exposed complementary DNA bases
- RNA polymerase joins together adjacent RNA nucleotides by forming phosphodiester bonds
- pre-mRNA is formed
- introns spliced out of pre-mRNA, leaving only exons
outline the process of translation
- once modified mRNA has left nucleus, it associates with a ribosome in the cytoplasm
- ribosome moves to start codon
- tRNA brings specific amino acid
- tRNA anticodons bind to complementary mRNA codons
- ribsome moves along to next codon
- amino acids join by peptide bonds with use of ATP
- continues until ribosome reaches stop codon - will detach
describe the mass flow hypothesis for the mechanism of translocation in plants
- at source sucrose is actively transported into the sieve tube element
- by companion cells
- lowers water potential in sieve tube element + water enters by osmosis from xylem
- produces high hydrostatic pressure
- mass flow towards sink as sucrose moves down hydrostatic pressure gradient
- at sink sugars are unloaded + either used in respiration or converted for storage
outline the digestion of lipids
- lipids are emulsified by the bile
- lipases hydrolyse triglycerides into fatty acids and monoglycerides by hydrolysing the ester bonds in lipids
- lipases are made in the pancreas and work in the small intestine
- bile salts produced in liver emulsify lipids into small lipid droplets - this increases the surface area for faster hydrolysis by lipases
- after being hydrolysed, the monoglycerides and fatty acids associate with the bile salts to form micelles
outline the absorption of lipids
- micelles contain bile salts, fatty acids and monoglycerides
- micelles make fatty acids and monoglycerides more soluble in water.
- fatty acids and monoglycerides are carried by micelles to cell lining of the ileum
- this maintains a higher conc of fatty acids at the lining of the ileum so they are reabsorbed by diffusion into microvilli in epithelial cells
- fatty acids and monoglycerides link to reform triglycerides
- triglycerides associate with lipoproteins + cholesterol inside the golgi apparatus to form chylomicrons in the golgi apparatus
- vesicles move to cell membrane
- chylomicrons leave the epithelial cell move into a lacteal (lymph capillary) which transports them to the rest of the body
outline the digestion of carbohydrates
- amylase produced by pancreas + salivary glands hydrolyses polysaccharides into maltose through the hydrolysis of glycosidic bonds
- digestion begins in mouth, continues in duodenum and is completed in ileum
- sucrase + lactase (membrane bound enzymes) hydrolyse sucrose and lactose into monosaccharides