Lecture 6 - MHC Intro Flashcards
Why is MHC important?
- Determines fate of engrafted/transplanted tissue
2. Highly polymorphic
Answer the following questions for:
- Class I HLA loci
- Class II HLA loci
- CLass III
1.What consists of the HLA (Human Leukocyte
Antigens)
- Where are they present?
- And they present antigen to which T-lymphocytes?
Which of these does not present antigen to T lymphocytes?
1. Class I HLA A HLA B HLA C - present in all nucleated cells - present CD8+ to T cells (cytotoxic/killer T cells)
- Class II
HLA - D which has 3 subset loci: DR, DQ, DP
- present in Antigen Presenting Cells (APC) like - Dendritic
- B lymphocytes
- Macrophages
- present CD4+ to T cells
- Class III
- genes that happen to reside in MHC region but DO NOT PRESENT ANTIGEN
Where is the HLA complex found?
Short arm of chromosome 6
Answer the following for Class I Loci molecules (A,B,C)
- How many polypeptide chains does the loci code for?
- Are they associated non-covanetly with a lighter chain? What is this chain called if yes?
- What does the resulting cell surface molecule consist of?
- Which part of the Class I molecule is transmembrane?
- ONE polypeptide chain
- 44,000 daltons - Beta 2 Microglobulin , specified by a gene on another chromosome and NOT polymorphic
- one alpha chain
- Class I polypeptide
- one light chain micro globulin Beta 2
- one alpha chain
- Alpha 3 is transmembrane
Which aspect of Class I molecule is polymorphic? Which part is the antigen binding site?
- Alpha 1 and 2 is polymorphic, beta 2 is NOT different in amino acid sequence
- Alpha 1 and 2 form the peptide binding cleft (supported y beta pleated sheet)
Answer the following for Class II HLA -D Loci molecules (subset DQ, DR, DP)
- How many polypeptide chains does the loci code for?
- Are they associated non-covanetly with a lighter chain? What is this chain called if yes?
- What does the resulting cell surface molecule consist of?
- Which part of the Class I molecule is transmembrane?
- Codes for 1 polypeptide chain, but 2 polypeptide chains per molecule
- alpha chain
- beta chain
- together = 60,000 daltons
2. NO lighter chain
3. Consists of alpha 1 and beta 1
4. Beta 2 and alpha 2 BOTH have a transmembrane C terminal portion)
Although the anchor molecules that bind a particular MHC Class I molecule do not need to be identical, they are always related.
In what way? (N terminal & C terminal)
N terminal = AROMATIC RESIDUE
C terminal = HYDROPHOBIC
Although the anchor molecules that bind a particular MHC Class II molecule do not need to be identical, they are always related.
HOW? State the 1st, 2nd, 3rd, and 4th anchor molecules
1st anchor - Hydrophobic
2nd - Negatively charged
3rd - Basic AA
4th - Hydrophobic
The genes that encode the MHC Class I alpha chains and the MHC Class II alpha and beta chains associate where? Where do they shuttle to?
- Associate in ER
2. Shuttle to cell surface to become membrane glycoproteins
What part of the MHC Class I gene is NOT encoded within the MHC region of chromosome 6?
Beta 2 - Microglobulin
Define what it means to express Class I and Class II genes in a codominant fashion of both chromosomes 6.
Discuss how haplotypes come into play and how they are expressed.
Each individual has 3 maternal and 3 paternal class I
AND has 3 maternal and 3 paternal class II molecular types
thus, each person has two “half sets” (haplotypes) of genes
- one haplotype is inherited from each parent and are expressed equally
= CODOMINANT EXPRESSION of MHC ANTIGENS
The polymorphism in nucleotide sequence and thus amino acid sequence of the MHC allows for what?
Allow for various peptides to bind and various TCR’s to recognize the MHC
Which class of molecules binds short peptides of about 9 amino acids in length?
Long?
- Class I
2. Class II
Where are polymorphisms in the MHC molecule found specifically?
in the Peptide Binding Cleft
Class I – alpha 1 and alpha 2 have high variability
(alpha 3 has little to no variability)
Class II - alpha 1 and Beta 1 have high variability (not beta 2 tho)
In order for a cellular interaction to occur between a T cell and the MHC presented on a cell, what must be matched & recognized?
- Antigen
2. antigenic peptide on MHC molecule