Lecture 6 Flashcards

1
Q

Why is choosing the correct spatial and temporal scales important in ecological modelling?

A

It ensures accurate representation of ecosystem processes and prevents over-simplification or loss of important dynamics.

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2
Q

What is a 0D (zero-dimensional) model?

A

A model that represents the system as a single point with uniform conditions (e.g., lake-wide average).

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3
Q

What is a 1D (one-dimensional) model?

A

A model that captures gradients in one direction, such as vertical profiles in lakes or longitudinal changes in rivers.

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4
Q

What is a 2D (two-dimensional) model?

A

A model that includes horizontal gradients, useful for estuaries or coastal ecosystems.

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5
Q

What is a 3D (three-dimensional) model?

A

A model that represents full spatial variability, incorporating vertical and horizontal changes.

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6
Q

What are Continuous Stirred Tank Reactor (CSTR) models?

A

Models that assume complete mixing and uniform conditions.

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7
Q

What are Plug Flow Reactor (PFR) models?

A

Models that assume no mixing in the flow direction, typically representing processes in rivers or pipes.

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8
Q

What is Ecospace?

A

A spatial extension of Ecopath and Ecosim, running multiple 0D models across a spatial grid to capture local dynamics and spatial interactions

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9
Q

What temporal scales are commonly used in ecological models?

A

Short-term (e.g., daily cycles) and long-term (e.g., decadal trends).

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9
Q

What are cascading models?

A

Models that link processes across scales to account for feedback mechanisms and interactions.

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10
Q

What is model validation, and why is it important?

A

Model validation tests the calibrated model against an independent dataset to assess its generalizability. A valid model performs well on new data, indicating robust parameters.

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11
Q

What is cross-validation?

A

Cross-validation divides the dataset into k parts and validates the model on one part while calibrating on the rest. The process repeats for all parts, and the average RMSE indicates model performance.

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12
Q

What are potential issues with k-fold validation?

A

Challenges include the choice of k, increased computation time, and potential dependence between validation sets.

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13
Q

What are constraints in ecological models?

A

Constraints limit model parameters to ensure realistic outcomes. For example, mass balance ensures that accumulation equals input minus output plus reactions.

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14
Q

How is spatial dimensionality used in ecological models?

A

0D (e.g., lakes) assumes uniformity, 1D represents gradients (e.g., depth in rivers), 2D models capture horizontal variability (e.g., lagoons), and 3D (e.g., Ecospace) represents full spatial complexity.

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15
Q

What is a CSTR model, and what are its assumptions?

A

Continuous Stirred Tank Reactor (CSTR) assumes uniform mixing and constant concentration throughout the volume, representing a 0D system with turbulent diffusion.

16
Q

What is a PFR model, and how does it differ from CSTR?

A

Plug Flow Reactor (PFR) assumes no mixing along the flow direction and models concentration changes across distance (1D).

17
Q

What are advective and diffusive transport?

A

Advection moves substances along with the fluid without changing concentration, while diffusion smooths concentration gradients.

18
Q

What is interphase transport, and how is it modeled?

A

Interphase transport describes the exchange of substances between phases (e.g., gas-liquid). Whitman’s two-film theory states that flux depends on the gradient between the concentration in the liquid and the partial pressure in the gas.

19
Q

What does Fick’s law describe?

A

Fick’s law describes diffusion, stating that the flux of a substance is proportional to the gradient of concentration.

20
Q

What is Michaelis-Menten kinetics?

A

A model describing enzyme-substrate reactions where reaction rate increases with substrate concentration until it plateaus at Vmax.

21
Q

How do adsorption processes differ in environmental models?

A

Adsorption follows different isotherms: Langmuir (monolayer adsorption) and Freundlich (heterogeneous surface adsorption). These models describe how substances bind to surfaces like sediments.

22
Q

What is Henry’s Law?

A

Henry’s Law states that the concentration of a gas in a liquid is proportional to its partial pressure in the gas phase.

23
Q

What is the bioaccumulation factor (BCF)?

A

BCF is the ratio of a substance’s concentration in an organism to its concentration in water, indicating uptake efficiency.

24
Q

What is the significance of partition coefficients in adsorption?

A

Partition coefficients (e.g., Koc) describe how contaminants distribute between solid and liquid phases, helping predict pollutant behavior.