Lecture 17 Flashcards

1
Q

what occurs in Cri-du-Chat syndrome?

A

part of chromosome 5 is deleted and missing genes required for normal development

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2
Q

what do we know about the genes lost in Cri-du-Chat syndrome?

A

none are haplosufficient –> all are haploinsufficient

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3
Q

2 possible causes of chromosomal deletions

A
  1. breakage + rejoining at incorrect place
  2. crossing over btwn repetitive DNA
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4
Q

what occurs in williams syndrome?

A

always caused by 1.5 Mb deletion on one homolog of chromosome 7

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5
Q

how does the deletion of Williams Syndrome occur?

A

region of 17 genes is flanked by PMS sequences

when the repeats pair in the wrong place during crossover, creates 2 unequal products: 1 with deletion, 1 with duplication

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6
Q

3 ways to detect chromosome deletions

A
  1. observe length/pairing
  2. DNA analysis with genomic technique
  3. complementation test
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7
Q

how can we use chromosome pairing to detect deletions?

A

sequences line up and will form deletion loop

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8
Q

what does the complementation test show if you cross a tester chr with recessive mutations and a WT chr?

A

will see WT phenotype –> WT genes complement for the recessive mutations

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9
Q

what does the complementation test show if you cross a tester chr with recessive mutations and a chr with WT alleles but some deleted?

A

will mutants of deleted genes

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10
Q

how can we use known deletions to map a recessive mutant allele?

A

cross tester with diff chr with deletions –> can map where certain recessive alleles are

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11
Q

what are large duplications known as?

A

segmental duplications

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12
Q

what does the size of the duplicated part depend on?

A

depends on how far apart the repeated sequences are

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13
Q

since we can see a lot of segmental duplications in the human genome, what does this indicate?

A

since duplications are caused by misalignment of repetitive sequences during crossover, having more duplicated sequences indicates that there is more misalignment

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14
Q

how do duplications impact an individual vs evolution?

A

duplication may be bad for individual but good for evolution

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15
Q

2 types of chromosome inversions

A
  1. paracentric –> does NOT include centromere
  2. pericentric –> includes centromere
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16
Q

what is the result of inversion if breakpoints are BETWEEN genes?

A

no genes are disrupted

if original was ABCD, product is ACBD

17
Q

what is the result of inversion if there is only ONE breakpoint BETWEEN genes?

A

a gene is disrupted –> LOF

18
Q

what is the result of inversion if there are breakpoints IN 2 genes?

A

gene fusion (can lead to functional gene)

19
Q

when does inversion affect meiosis?

A

ALWAYS! even if genes not affected

20
Q

what is produced during meiosis when there are inversions?

A

forms inversion loop

21
Q

describe what happens to a PARACENTRIC-inversion heterozygote during meiosis

A
  1. crossover occurs in loop
  2. upon segregation in anaphase, forms dicentric chromosome and an acentric fragment that is lost
  3. breaks randomly btwn the 2 centromeres
  4. forms a normal product, 2 deletion products, and an inversion product
22
Q

describe what happens to a PERICENTRIC-inversion heterozygote during meiosis

A
  1. crossover occurs in loop
  2. no dicentric chromosome bc pericentric, so no breaks involved
  3. forms 2 normal products (1 of each chr), 1 product with “a” duplication and “d” deletion, and 1 product with “d” duplication and “a” deletion
23
Q

what are the clinical consequences of inversions on adults?

A

will still get some normal products so some daughter cells will be viable

gametes that inherit abnormal products/crossover chromosomes will be infertile bc cannot pair properly
- somatic cells will be normal bc don’t require pairing during mitosis

24
Q

what are the effects of inversion on recombinant progeny?

A

if 2 genes are 45 mu apart, expect 45% of progeny are recombinant

but with inversion will see «45% bc of inviable products

25
Q

what are the implications of having a larger inversion?

A

larger inversion
= higher chance of recombination within inversion
= more gametes with large duplications/deletions
= progeny don’t survive