lab final Flashcards

1
Q

Anaphase

A

sister chromatids separate and move to opposite poles

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2
Q

telophase

A

spindle dissembles, chromosomes de-condense and new nuclear envelope forms to create to daughter cells

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3
Q

metaphase

A

the phase of mitosis where the condensed chromosomes align along the equator of the cell

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4
Q

prophase

A

chromosomes are replicated and the mitotic spindle forms
nuclear envelope break down and the chromosomes condense

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5
Q

prometaphase

A

spindle microtubules attach to the kinetochores of chromosomes

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6
Q

In Lab 2, you inoculated four agar plates with bacteria as part of the genetic engineering lab. On which plate(s) do you expect to find no bacteria at all? Select all that apply.

A

LB/amp/-pGLO

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7
Q

In Lab 2, you inoculated four agar plates with bacteria as part of the genetic engineering lab. On which plate(s) do you expect to find only bacteria that have been transformed? Select all that apply.

A

LB/amp/+pGLO
LB/amp/ara/+pGLO

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8
Q

T-test

A

To determine whether the difference between two calculated means is statistically significant.

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9
Q

What purpose do the control plates serve in our bacterial evolution experiment?

A

They tell us that the cells we streaked from the previous week are still alive, in case no cells grow on our salinity plates

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9
Q

The purpose of using high salt concentration during a DNA extraction is to:

A

strip away any proteins that are associated with the DNA and make DNA more soluble in water

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10
Q

The complementary strand

A

The DNA strand generated during the replication of a template strand

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11
Q

histones

A

DNA molecules are wound around these proteins

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11
Q

the purpose of using detergent during a DNA extraction is to

A

lyse open the cells and denature proteins

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12
Q

synonymous mutation

A

if the single base substitution codon encodes for the same amino acid

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13
Q

nonsense mutation

A

if the mutated codon changes into a stop codon

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14
Q

non-synonymous mutation

A

if the single base substitution codon encodes for a different amino acid (missense)

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15
Q

What characteristics of bacteria make them a good model system for studying evolution?

A

— They have a simple genome, so it is easier to identify genes associated with evolutionary adaptation
—-Many evolutionary mechanisms are conserved between bacteria and other organisms, including humans
—They have very short life cycles and reproduce very quickly
—They have a high mutation rate and can acquire new genetic traits easily
—They can grow in a wide range of conditions

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16
Q

Assuming no crossing over has occurred, sister chromatids will have identical alleles for each of their genes. (T/F)

A

true

17
Q

null hypothesis of the t-test

A

there is no statistically significant difference between the two calculated means

18
Q

do homologous chromosomes always have identical alleles?

A

no

19
Q

A diploid cell with 4 chromosomes (2 homologous pairs) undergoes two rounds of mitosis. How many chromosomes will be present in each daughter cell after round two?

A

4

20
Q

If a calculated Chi-square or t-value is lower than the value you selected in the respective comparison table, what can you conclude about the results?

A

the results are not significantly different

21
Q

In Lab 2, you inoculated four agar plates with bacteria as part of the genetic engineering lab. On which plate(s) do you expect to find only bacteria that glow under UV light? Select all that apply.

A

LB/amp/ara/+pGLO

22
Q

What environmental factors are needed to see fluorescence in transformed E. coli?

A

UV light and arabinose

23
Q

the purpose of using isopropanol during a DNA extraction is to:

A

make DNA more soluble in the extraction buffer

24
Q

What properties help us efficiently purify and visualize DNA

A

— DNA has a negatively-charged backbone that can attract specific dyes
—cell membranes are made of lipids that can be disrupted by detergents
—DNA-interacting proteins have positive changes that can be neutralized by negativley-charged ions from salts

25
Q

polyploidy

A

multiple copies of each chromosome

26
Q

washing DNA in ethanol accomplishes what?

A

This allows the salts to dissolve while minimizing DNA solubility.

27
Q

araC

A

inducer, a DNA sequence from a bacterial gene regulatory operator that allows the transcription of GFP (DNA sequence from the jellyfish) only when the sugar arabinose is present.

28
Q

ampR

A

selectable marker, DNA sequence from a bacterial source that allows that transformed bacteria to make B-lactamase (catalyzes the breakdown of ampicillin)
confers ampicillin resistance to transformed bacteria.

29
Q

difference between +/- pGLO

A

-pGLO does not contain the glowing bacteria plasmid.

30
Q

which plates from lab 2 should be compared to determine if any genetic transformation has occurred?

A

-pGLO (control) and amp/ara/ +pGLO (most bacterial growth occurs)

31
Q

what is a control plate in lab 2? What was its purpose

A

-pGLO, an E.coli plate without the pGlO plasmid insured and therefore no presence of GFP

32
Q

how is pGLO expression in the transformed bacteria being induced?

A

the arabinose induces transformation of the pGLO

33
Q

chi-squared test

A

statistical test to determine how well-observed ratios fit expected ratios.
tells you that the probability that chance alone has caused the deviation between the observed and the expected results

34
Q

if the p-value is </= 5%

A

the difference is not significant between observed and expected, we would accept the null hypothesis

35
Q

if the p-value is >/= 5%

A

the difference is significantly different between observed and expected, we would reject the null hypothesis

36
Q

degrees of freedom

A

one less than the number of possible outcomes (n-1)

37
Q

independent assortment

A

the arrangement of paternal and maternal copies for each pair of homologous chromosomes occurs independently of other pairs of homologous chromosomes.

38
Q

You are comparing bacterial growth rates at different temperatures and have collected data for three samples each of control (37 degrees Celsius) and experimental condition (42 degrees Celsius). After calculating the mean values for each, you perform a t-test and get a t-value that is very close but just below the threshold value in the table. If you were to repeat this experiment, what would be the best thing to change to increase your likelihood of attaining a statistically significant result?

A

keep experimental conditions the same, but increase the number of samples collected

39
Q

In Lab 2, you inoculated with UV-sensitive yeast on three agar plates. On which of these three plates do you expect the most UV damage to occur?

A

no treatment

40
Q

Assuming no chromosomal translocations or deletions have occurred, will homologous chromosomes have the same genes as each other?

A

yes

41
Q

assuming no crossing over has occurred, will sister chromatids have identical alleles for each of their genes?

A

yes