Lab 9 Flashcards

1
Q

What can enzyme-linked immunosorbent assays be used to detect? [3]

A
  • Bacterial toxins
  • Bacterial proteins
  • Virions
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2
Q

How is the sample prepared for an ELISA?

A

Homogenized in a phosphate buffer

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3
Q

What does ELISA require?

A
  • Two antibodies that bind to different structures of the target of interest (e.g., toxin).
  • One antibody is conjugated covalently to an enzyme (E).
  • The enzyme cleaves a colourless substrate (S) to a coloured product (P).
  • The amount of product can be measured (qualitative or quantitative - via a standard curve)
This is highly specific.
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4
Q

What can lateral flow devices detect?

A
  • Pathogens (virus, bacteria)
  • Other contaminants (toxins)

Same concept as ELISA

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5
Q

What does fluorescent in-situ hybridization detect?

A
  • Detects and locates a specific sequence on a chromosome
  • Allows for direct quantification of pathogens without the need to culture the bacteria first.
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6
Q

How does fluorescent in-situ hybridization (FISH) work?

A
  • Uses a piece of DNA (probe) that is complementary to a sequence in the chromosome.
  • A fluorescent dye is attached to the probe
  • Would have DNA probes to recognize a sequence of a portion of a pathogen like Salmonella
  • Can visualize with fluorescent microscope
  • Time to completion = 2-3 days including preparation of sample
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7
Q

Viruses have no widespread use in food production.
True or False?

A

True.

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8
Q

Viruses have widespread use in food production.
True or False?

A

False.
They have no use.

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9
Q

Microbes in our foods and drinks can: [4]

A
  • Enhance or spoil taste and texture
  • Extend or reduce shelf-life and store-ability
  • Increase or decrease mineral, nutrient, caloric, or vitamin content
  • Benefit or harm our microbiomes (oral, gut, skin, etc.)
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10
Q

Describe microbes in bread production.

A
  • Bread has been a staple food item in many cultures for thousands of years.
  • There are different ways of making bread, some of which do not involve microorganisms, but most breads utilize yeasts, which are single-celled fungi.
  • These yeasts ferment sugars to ethanol and carbon dioxide.
  • The carbon dioxide helps the bread to rise.
  • Some breads (e.g., sourdough) also use bacteria called ‘lactic acid bacteria’, which provide the distinctive sour taste.

What happens to the ethanol? (it gets cooked out)

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11
Q

Describe microbes in dairy prodution.

A
  • Many popular dairy products are produced with microorganisms.
  • For example, most cheeses rely on bacteria to create a low pH and thereby help to coagulate milk proteins.
  • Blue cheeses also contain molds, which give them their unique characteristics.
  • Various molds, yeasts or bacteria are also added to the outside of cheeses to alter the final product (ripening and flavor).
  • Yogurt production relies on bacteria, in order to thicken the milk and provide a distinctive sour taste.
  • Other fermented dairy products (e.g., kefir) are made with both bacteria and yeasts.
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12
Q

Describe microbes in soybean products.

A
  • Soybeans are used to create a wide array of products, particularly in East-Asian cuisine.
  • Some of these products rely on fermentation.
  • For example, soy sauce is made from soybeans that have been inoculated with a certain species of mold.
  • Miso paste is also made with the same mold and used to make popular food items such as miso soup.
  • Tempeh is a solid product, where soybeans are pressed into blocks and fermented by a different species of mold.
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13
Q

Describe microbes in meat and fish products.

A
  • Fermented meat and fish products are common in some countries.
  • Some salamis are made with bacteria which can lower the pH of the meat and prevent spoilage.
  • Some also use mold to cover the salami for protection.
  • However, not all salamis are made using fermentation.
  • Fish fermented by bacteria is eaten more commonly in some Scandinavian countries and Central to East Asia.
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14
Q

Describe microbes and vegetables.

A
  • Kimchi is a traditional food in Korea and is made from various vegetables which are fermented by bacteria.
  • Sauerkraut is made by fermenting cabbage with bacteria that are naturally present on the leaves.
  • Although the word sauerkraut is German, many countries make very similar foods under different names.
  • Pickles can be made by fermenting vegetables in brine. Bacteria then create acid which lowers the pH and preserves the contents. Many pickles are instead made by directly adding vinegar to reduce the pH.
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15
Q

Describe microbes in condiments and sauces.

A

A number of condiments and sauces rely on microorganisms for their distinctive
flavors. These include:
* yeast extracts (e.g., vegemite) – created by destroying yeast cells, which then digest themselves;
* Worcestershire and fish sauces also rely on fermentation by bacteria;
* Some (but not all) hot sauces also use fermentation for a richer flavor;
* Vinegar is made using fermentation of various starting materials, such as wine, cider or fruit juice, by acetic acid bacteria.

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16
Q

Describe microbes and chocolate.

A
  • Chocolate originally comes from cocoa beans.
  • These beans are not able to be used to make chocolate until they have been fermented.
  • Naturally occurring yeasts and bacteria complete this process over a period of 6-10 days.
  • The fermentation destroys the unwanted seed coating of the bean and prevents it from being able to grow.
  • Importantly, it also begins to form some of the desirable flavors that are recognizable in chocolate.
17
Q

Describe microbes and alcoholic drinks.

A
  • Alcoholic drinks rely on microorganisms producing ethanol through fermentation.
  • This is typically performed by yeasts.
  • Yeasts ferment sugars, forming ethanol and carbon dioxide.
  • Sometimes the carbon dioxide is released, leading to a ‘still’ drink.
  • Sparkling wines and many beers retain carbon dioxide, which helps to form bubbles or foam.
  • Wines often also rely on bacteria. These bacteria ferment malic acid into lactic acid. This stops the wine from tasting sour and unpleasant.
18
Q

Describe microbes and non-alcoholic beverages.

A
  • Kombucha, thought to have been created in Eastern Russia/North Asia, is made by fermenting sweetened tea. It uses yeasts to break down sugars into ethanol and carbon dioxide and bacteria to break down the ethanol into acids.
    This keeps the alcohol content relatively low and introduces a sour taste.
    Kvass is a similarly-produced drink that is popular in Eastern Europe and Russia. It is typically made from fermented rye bread, with the addition of sugar, yeasts and lactic acid bacteria.
19
Q

Describe EMB agar.

A
  • The two dyes in EMB or Eosin - methylene blue agar plates inhibit the growth of Gram positive organisms and, along with the lactose in the medium, allow for differentiation of enteric bacteria on the basis of colony morphology.
20
Q

How do typical fecal coliform appear on EMB agar?

A
  • Small
  • Dark red
  • Nucleated with a green metallic sheen
21
Q

How do non-fecal coliforms appear on EMB agar?

A
  • Large
  • Pink
  • Possibly mucoid, nucleated, or un-nucleated
  • No metallic sheen
22
Q

What is tryptic soy agar?

A
  • A basic medium for culturing many kinds of microbes.
  • The media contains a tryptic digest of casein, which may be useful in growing fastidious organisms.
23
Q

What do BGA and SSA agars have in common?

A
  • Both types of media are selective/differential media designed to facilitate the isolation of Salmonellae from a variety of samples, including foods.
  • Brilliant green agar (BGA) contains the dye brilliant green, which inhibits gram positive bacteria.
  • Salmonella-Shigella agar (SSA) contains brilliant green as well as bile salts and sodium citrate, which inhibit non-enteric bacteria.
24
Q

How can Salmonella be differentiated from other organisms on both BGA and SSA agar?

A
  • By their inability to ferment lactose
  • Both types of media contain pH indicators that are sensitive to acid production as a result of lactose fermentation.
  • Organisms that ferment lactose will produce acidic byproducts that may change the color of the pH indicator
  • Salmonella uses other nutrients for growth and does not produce acidic byproducts, resulting in a different color of the indicator.
25
Q

How does Salmonella appear on SSA agar?

A
  • Colourless colony
  • May have black center (the black colour is ferric sulfide, the result is a reaction between H2S (from the metabolism of sulfur-containing compounds) and ferric citrate (in SSA)
26
Q

How does Shigella appear on SSA agar?

A
  • A non-fermenter, that is H2S negative
  • Colourless, no black center
27
Q

How do colonies of lactose fermenters appear on SSA?

A
  • Pink or red colonies.
28
Q

How do Salmonella appear on BGA?

A
  • Reddish, or slightly pink/white
  • Transparent or opaque colonies
  • Surrounded by bright pink medium.
29
Q

How do lactose fermenting colonies appear on BGA agar?

A
  • Yellow-green colonies
  • Surrounded by an intense yellow-green zone.