L2 - secretory Flashcards

1
Q

Why do we need membrane traffiking?

A
  • compartmentalisation ( complexity/specialisation)
  • Enzymes can modify proteins in certain environments
  • sequential modifications - proteins need to be exposed to distinct subsets of enzymes in different compartments
  • retrieval of proteins/enzymes back to resident compartments
  • targets proteins to correct compartments.
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2
Q

What is the order of compartments in the biosynthetic (secretory) pathway?

A

ER - cis golgi - trans golgi - PM/endosome

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3
Q

What is the order of compartments in the endocytic pathway?

A

cell surface - endosome - trans golgi - cis golgi - ER - lysosome

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4
Q

what is constitutive secretion?

A

Where a component is secreted continuously regardless of external factors/signals. ( no specific signal is required for secretion)

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5
Q

what is regulated secretion?

A

where a component is held in compartments (granules) until a required signal is received for secretion to occur. (e.g. Ach in NMJ)

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6
Q

where are endosomes derived from?

A

golgi membrane

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7
Q

what does ERGIC stand for?

A

endoplasmic reticulum - golgi intermediate compartment.

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8
Q

what is glycosylation?

A

A controlled enzymatic modification of a molecule (commonly proteins) by the addition of a sugar molecule

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9
Q

what did studies in the 1970s show us about biochemical compartmentalisation?

A

Gave us a good idea of compartmentalisaiton within the secretory pathway e.g. looked a insulin
- events associated with packaging/sorting/transport/ final exocytosis obscure

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10
Q

where are proteins modified by oligosachharide addition?

A

In the ER , but are then processed/trimmed in the golgi (+ other sugar transferases added in golgi)

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11
Q

what type of gycosylation can occur on proteins?

A

N- and O- linked glycosylation

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12
Q

what is the purpose of glycosylation?

A
  • constrain and assist correct folding of protein
  • help with recognition (act as a ligand) (can distinguish between cell types), processing into correct compartment, interact with ECM and sugars on other cells
  • create variation to same protein
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13
Q

what type of sugars are the basis of the ABO blood type system?

A

O- linked sugars

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14
Q

Give examples of the importance of gylcosylation

A
  • O-linked sugars basis of ABO blood typing
  • muscular dystrophies caused by absence of certain sugars on the protein dystroglycan
  • staphylococcus aureus toxin binds to specific sialic acid residues on certain human cell surface glycosylated proteins.
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15
Q

what can staphylococcus aureus cause?

A

can cause a range of illnesses, e.g. skin conditions, pimples, to meningitis and pneumonia, sepsis, TSS

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16
Q

what is dystroglycan?

A

is a protein which links dystrophin to ECM (F-actin) around muscle cells. Without the sugar on dystroglycan this interaction cannot occur

17
Q

what makes a model organism suitable for studies on membrane traffiking?

A

-simplicity - as traffiking occurs on a cellular level single celled organisms could provide some information
- specific types of secretions- need organism which can perform this
-

18
Q

what are the advantages of using yeast as a model organism?

A
  • no ethical issues
  • grow as haploid of diploid (good for genetic studies)
  • known genome
  • cheap and easy to grow in large quantaties
  • conserved pathways
19
Q

what are the disadvantages of using yeast as a model organism?

A
  • not much cell-cell contact so can’t tell much about multicellularity
  • limited gene diversity
  • small (high resolution difficult)
  • has a wall- can preclude some studies
20
Q

who conducted the key experiment to investigate genes in the secretory pathway in yeast?

A

Novick and schekman in 1980

21
Q

what is a berkley body?

A

defective endosomal structure

22
Q

what is Kex2?

A

kex2 is an enzyme in yeast