Key Points Document Flashcards

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1
Q

Cell wall function

A

Provides rigid shape

Stops osmotic lysis

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2
Q

Outline the roles of organelles in the production, transport and release of proteins from eukaryotic cells

A

DNA in nucleus codes for the protein
Ribosomes on the RER produce the protein
Mitochondria produce ATP needed for protein synthesis
Golgi apparatus modifies and packages protein into
vesicles
Vesicles transport the protein to the cell surface membrane where they fuse with it and undergo exocytosis to desired location

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3
Q

Compare and contrast DNA in prokaryotes and eukaryotes

A

Nucleotide structure identical
Nucleotides joined by phosphodiester bonds
Deoxyribose sugar
DNA in chloroplast and mitochondria similar to prokaryote

Eukaryotic longer
Eukaryotic contains introns
Eukaryotic is linear, Prokaryotic circular
Eukaryotic membrane bound, Prokaryotic free floating
Eukaryotic associated with histone

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4
Q

Differences between plant and prokaryotic DNA

A
Plant associated with histones, Prokaryotic not
Plant linear, Prokaryotic circular
Plants have no plasmids, Prokaryotes do
Plants have introns, Prokaryotes do not
Plants longer
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5
Q

How is cholera different to epithelial cells

A

Cholera is prokaryotic, epithelial Eukaryotic
Cholera has no nuclear membrane and DNA free floating and circular
Cholera has no membrane bound organelles
Or SER/RER
Cholera only has small ribosomes
Cholera has a flagella, capsule, plasmid or cell wall

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6
Q

Advantage of TEM over SEM

A

Higher resolution
Higher magnification so more detail/internal details to be seen
Cross sections can be taken

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7
Q

Advantage of SEM over TEM

A

Can be 3D
Thin sections do not need to be prepared
Shows surface of specimen

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8
Q

Advantages vs disadvantages of TEM

A

Small objects can be seen
High resolution
Electrons wavelength is shorter than light

Cant look at living cells, must be dead
Must be a thin specimen
Must be in a vacuum
Risk of creating artefacts in preparation

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9
Q

Why isotonic

A

Prevents osmosis so organelle doesn’t burst of shrivel

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10
Q

Why ice cold

A

Reduce enzyme activity so organelles are not digested

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11
Q

Why add a buffer

A

Maintain a constant pH so proteins do not denature

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12
Q

How can cell fractionation and centrifugation be used to isolate mitochondria from a suspension of animal cells

A

Cell homogenisation to break open cells and release organelles
Filter to remove large debris like cell walls
Use isotonic solution to prevent osmotic damage to mitochondria
Keep ice cold to prevent damage to organelles by enzymes
Use a buffer to maintain pH so proteins don’t denature
Use differential centrifugation to separate nucleus in first pellet since densest
Re spin supernatant at a higher speed and the next pellet is mitochondria
Observe with microscope to check it is mitochondria

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13
Q

Why fluid mosaic

A

Fluid because molecules can move around within the membrane

Mosaic because made up of a variety of different molecules unevenly distributed

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14
Q

How is movement across cell membrane affected by membrane structure

A

Phospholipid bilayer allows lipid soluble substances to enter by simple diffusion
Stops polar, charged and water soluble molecules entering
Carrier proteins allow active transport
Channel and carrier proteins allow facilitated diffusion
Cholesterol affects permeability
Surface area determines how much diffusion
Number and type of channel proteins and carrier proteins determines how much is transported and what is transported

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15
Q

Non-specific defence mechanisms against pathogen

A
Phagocytosis
Pathogen engulfed by phagocyte
Entering its cytoplasm in a vesicle
Lysosomes fuse
Releasing hydrolytic digestive enzymes
Lysozymes break down the pathogen
Waste ejected from cell via exocytosis
Becomes and APC
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16
Q

Cells that can stimulate an immune response

A

Abnormal body cells
Pathogens
Cells from other organisms like transplant
Cells infected by virus

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17
Q

How do vaccines cause production of antibodies

A

Vaccine contains antigens from pathogen
Macrophage presents the antigens on its cell
T helper cell with complementary receptor protein binds to antigen
Stimulating specific B cell with complementary antibody on its surface
B cell divides by mitosis in clonal selection
Producing more of the antibody
And memory B cells
B cells secrete large amounts of antibody

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18
Q

How does the humoral response lead to immunity

A

B cells specific to antigen undergo clonal selection by mitosis
B cells produce plasma cells and memory cells
Second infection produces antibodies quickly in large volumes

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19
Q

Role of antibodies in stimulating phagocytosis

A

Bind to antigen and act as markers for opsonisation

Clump pathogens together so easier to destroy

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20
Q

Active vs passive immunity

A

Active involves memory cells
Active involves production of antibody by plasma cells
Passive involves antibody introduced from external source
Active is long term because antibody produced in response to antigen
Passive is short term since antibody is broken down
Active can take longer to develop and passive is faster acting

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21
Q

Monoclonal antibody

A

Antibodies produced from a single clone of B cells

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22
Q

Why are monoclonal antibodies specific

A

Specific primary structure
Specific tertiary structure
So can only bind to one type of antigen

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23
Q

Structure of HIV

A

Human Immunodeficiency Virus

RNA is the genetic material
Reverse transcriptase contains genetic blueprint to rewrite human gene to manufacture viral particles
Protein capsid
Phospholipid envelope made from cell membrane of cell budded off
Attachment proteins allow it to bind to host cell

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24
Q

How does a person with HIV develop AIDS and die of secondary infections

A

High viral load leads to increased destruction of T helper cells
Less activation of B cells
Less production of antibodies
Less able to destroy other microorganisms or abnormal body cells

25
Q

How do antibodies contribute to a positive ELISA

A

First antibody binds to complementary antigen
Second antibody with enzyme attached is added
Second antibody attaches to antigen
Substrate added causing a colour change

26
Q

Prophase

A

Nuclear membrane begins to break down
Centrioles move to opposite poles of cell
Chromatin supercoils and condenses into chromosomes

27
Q

Metaphase

A

Spindle fibres form
Spindle fibres attach to centromere of chromosomes
Chromosomes align along the equator

28
Q

Anaphase

A

Spindle fibres contract and shorten
Centromere splits
Sister chromatids are separated
Chromatids pulled to opposite poles of cell

29
Q

Telophase

A

Nuclear membrane begins to reform

Chromosomes unwind

30
Q

Homologous pair

A

Two chromosomes carrying the same genes in the same loci

31
Q

How to make a mitotic index accurate

A

Repeat count to ensure figures are correct
Large number of fields of view so representative
Only count cells half or more in view to standardise counting

32
Q

How does meiosis result in haploid chromosome number and show genetic variation

A

Homologous chromosomes pair up
Maternal and paternal chromosomes are arranged in any order
Independant segregation
Crossing over
Equal lengths of non sister chromatids exchanged between chromosomes
Producing recombinant alleles/new combinations
Chromatids separated at meiosis ll

33
Q

What is crossing over and how does it increases genetic diversity

A

Homologous pairs of chromosomes associate and for a bivalent
Chiasmata forms
Equal lengths of non sister chromatids exchanged
Producing new combinations of alleles

34
Q

Mitosis vs Meiosis

A

Mitosis is one division, meiosis is two
Mitosis produces genetically identical daughter cells whereas meiosis is genetically different
Two produced in mitosis whereas four in meiosis
Diploid to diploid in mitosis, diploid to haploid in meiosis
Crossing over only in meiosis
Independant segregation only in meiosis

35
Q

Exon

A

Base/nucleotide/triplet sequence coding for a polypeptide of amino acids

36
Q

Transcription in eukaryotes

A

Hydrogen bonds between DNA bases are broken by DNA helicase
Only one strand acts as a template
Free RNA nucleotides attracted to complementary base pair
Uracil with Adenine and Cytosine with Guanine
RNA polymerase joins adjacent RNA nucleotides
By phosphodiester bonds
Pre-mRNA is spliced to form mRNA and introns removed

37
Q

Describe translation

A

mRNA attaches to ribosome
Moves along to find the start codon
tRNA anticodons bind to complementary mRNA codons
tRNA brings the specific amino acid
Which are joined by peptide bonds with energy from ATP
tRNA released after amino acid added to polypeptide
Ribosome moves along the mRNA and forms the polypeptide until reaches the stop codon
Ribosome can read two codons at once

38
Q

Differences between mRNA and tRNA

A
mRNA has no hydrogen bonds but tRNA does
mRNA linear tRNA clover leaf
mRNA has no amino acid binding site tRNA does
mRNA has more nucleotides
tRNA are all similar length, mRNA varies
mRNA has codons, tRNA has anticodons
39
Q

Degenerate code meaning

A

More than one codon codes for an amino

40
Q

Non overlapping meaning

A

A base from one triplet cannot be used in an adjacent triplet

41
Q

How can a mutation in DNA base sequence lead to a non functional enzyme

A

Change in DNA base sequence
Change in primary structure/amino acid sequence
Change in hydrogen, ionic and disulphide bonding
Change in tertiary structure
Change in active site
No longer complementary to substrate so cant form an ESC

42
Q

Two reasons why not all mutations cause a change

A

Triplets code for the same amino acid

Occurs in non coding sequence/intron

43
Q

Phylogenetic group

A

Grouped according to evolutionary links/history

44
Q

Hierarchy

A

Groups within groups

No overlap between groups

45
Q

Genetic diversity

A

Differences in DNA base sequence/alleles of a population

46
Q

Why is index of biodiversity better

A

Some species may be present in high or low numbers

Also measures the number of individuals in each species

47
Q

How can comparisons of biological molecules be used to find out if closely related

A

Genetic variation; compare DNA base sequence/compare mRNA base sequence/compare sequence of amino acids

DNA hybridisation by separating strands of DNA; mix DNA strands of different species/heat required to separate strands indicates relationship

Immunological evidence; Inject x1 protein into x2/obtain antibodies/add protein from x2/amount of precipitate indicates relationship

48
Q

Why is it better to classify from base sequence of gene than amino acid sequence of a gene

A

There are more bases than amino acids and base sequence is longer
Introns present in DNA but aren’t expressed in amino acids
Same amino acid can be coded for by different triplet due to degenerate DNA code

49
Q

Describe the process that leads to a reduction in genetic diversity

A

Reduced number of different alleles/reduced gene pool
Founder affect
A few individuals from a population become isolated
Genetic bottle necks
Significant fall in size of population
Selective breeding and artificial selection
Using organisms with particular alleles/phenotypes

50
Q

How can protein structure be used to investigate evolutionary relationship between species

A

Amino acid sequence
Is coded for by DNA base sequence
Closer amino acid sequence means closer relationship

51
Q

Why does species diversity decrease when forests are cleared to make land available for agriculture

A

Decreased variety of plants and fewer species
Fewer niches/habitats
Decrease in variety of food/fewer food sources
Machinery and pesticides cause harm to organisms that were present
Pesticides kill species

52
Q

Genetic bottle neck

A

Sudden decrease in population/many killed by an event like earthquake
Reducing genetic variation

53
Q

Ethical arguments for maintaining biodiversity

A

Prevents extinction

Save organisms for future generations

54
Q

Economic arguments for maintaining biodiversity

A
Medical/pharmaceutical uses
Commercial products like wool
Tourism
Agriculture
Saving local forest communities
55
Q

How can clearing forests lead to reduced diversity of insects

A

Lower diversity of plants so fewer plant species
Fewer sources of food
Fewer habitats/niches
Pesticides and insecticides kill insects

56
Q

How does courtship increase probability of successfully mating

A
Attracts mate of same species
Attracts mate of opposite sex
Indication of fertility/sexual maturity
Stimulates release of gametes
Form pair bond
57
Q

Considerations for mark release recapture

A

No change in population size (no births, deaths, migration or emigration)
Markings should not make animals more susceptible to predators
Markings should not rub off or be lost
Sufficient time for fully dispersing through rest of population

58
Q

Measure wind speed, soil pH, temperature and light intensity

A

Anemometer
pH probe
Digital thermometer
Lux meter