Intro To Virology Flashcards

1
Q

What are the 2 components of a virus

A

•1) a genome consisting of either ribonucleic acid (RNA) or deoxyribonucleic acid (DNA), but not both,
•2) a protein-containing structure (capsid) designed to protect the genome.

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2
Q

What are some additional structural features some virus carry

A

-•an envelope composed of a protein-containing lipid bilayer, whose presence or absence further distinguishes one virus group from another.
-• Essential enzymes are carried within some viruses e.g RNA Polymerase

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3
Q

• A complete virus particle combining these structural elements is called what

A

A Virion

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4
Q

What’s a capsid

A

The protein coat that surrounds nucleic acid.

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5
Q

What’s a nucleocapsid

A

The nucleic acid plus the capsid

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6
Q

What’s a capsomere

A

The structural protein units that made up the capsid.

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7
Q

What are surface proteins

A

These are glycoproteins found on the lipid envelope of viruses that facilitate attachment and entry of the virion into host cells

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8
Q

Shapes of capsid

A

Helical
Icosahedral
(Prolate, spherical)*

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9
Q

Characteristics of Virus (8)

A

•Viruses are smaller than bacteria, they range in size between 20-300 nanometers ( nm ).
•Viruses contain only one type of nucleic acid, either DNA or RNA, but never both.
•Viruses consist of nucleic acid surrounded by a protein coat. Some viruses have an additional lipoprotein envelope.
•Viruses lack cellular organelles, such as mitochondria and ribosomes.

•Viruses are obligate cellular parasites. They replicate only inside living cells.
•Viruses replicate through replication of their nucleic acid and synthesis of the viral protein.
•Viruses do not multiply in chemically defined media.
•Viruses do not undergo binary fission

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10
Q

How do viruses replicate

A

Viruses replicate through replication of their nucleic acid and synthesis of the viral protein.

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11
Q

Classification of virus are based on what

A

•type and structure of the viral nucleic acid (Genome)
•type of symmetry of the virus capsid (Capsid Symmetry)
•presence or absence of a lipid envelope. (Envelope)

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12
Q

What’s the classification of virus based on genome

A

•DNA virus or RNA virus
•Linear or circular
•Single or double stranded
(Some viruses are also recognized as segmented)

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13
Q

What are the classifications of DNA genome viruses

A

•Single-stranded (linear) DNA :(parvoviruses)
•Double-stranded DNA
-Linear genome: adenoviruses, herpesviruses, and poxviruses
-Circular genome: polyomaviruses and hepadnaviruses

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14
Q

What happens to (+) RNA genome in retroviruses

A

They are not translated into protein but are converted into DNA, which then acts as a template for the production of mRNA

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15
Q

What’s the classification of RNA genome viruses

A

•Positive-sense (+) RNA
-Same sequence as messenger RNA (mRNA)
-Directly translated into protein
{Exception is the retroviruses in which the (+) RNA genome is not translated but is converted into DNA, which then acts as a template for production of mRNA.}

•Negative-sense (-) RNA
-Sequence complementary to mRNA
-Must be copied into (+) strand to generate mRNAs for protein synthesis

•Double-stranded (+/–) RNA: copying of (-) strand generates mRNA for protein synthesis

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16
Q

3 characteristics of segmented genomes

A

• Found in the reoviruses, a dsRNA genome, and in three families of (-) ssRNA viruses❗️( orthomyxoviruses, arenaviruses, and bunyaviruses ) ❗️
• Consists of several pieces, or segments, each of which encodes at least one polypeptide
• May undergo reassortment among genomic segments

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17
Q

What 3 (-) ssRNA have segmented genome

A

Othomyxoviruses
Arenaviruses
Bunyaviruses

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18
Q

What are the classification of viruses based on their capsid symmetry

A

•Cubic
-The virus particle is icosahedral in shape (almost spherical particle ) and the nucleic acid contained inside the capsid.
•Helical
-The virus particle is elongated or pleomorphic (not spherical), and the nucleic acid is spiral
•Complex
-The virus particle does not confirm either cubic or helical symmetry.

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19
Q

What’s the classification of viruses based on their envelope

A

•Naked
•Enveloped

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20
Q

Difference between naked and enveloped viruses (7)

A

Component
Naked: Protein
Enveloped: Protein, Phospholipid, Glycoproteins

Sensitivity to heat, detergent, acid
Naked: Not sensitive (stable)
Enveloped: Sensitive (Labile)

Effect of drying
Naked: Retain infectivity
Enveloped: Loses infectivity

Transmission or mode of spread
Naked: Feacal oral, formite, dust
Enveloped: large droplets, secretion, organ or blood transplants

Host immune response
Naked: Antibody defense
Enveloped: Antibody defense and cell mediated response

Survival in GIT
Naked : yes
Enveloped: no

Release from host cells
Naked: by lysis (death of cell)
Enveloped: by budding (survival of cell) or lysis

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21
Q

Which enveloped virus scan survive in the GIT

A

Corona and Hepadna virus

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22
Q

Break down the DNA Viruses

A

DNA viruses
Double stranded. Single stranded

Env. Unenv. Unenv.

Enveloped ddDNA
Hepadna virus (c)
Herpes virus (L)
Pox virus (L)

Unenveloped ddDNA
Adeno virus (L)
Papilloma virus (c)
Polyoma virus (c)

Unenveloped ssDNA
Parvo virus (L)

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23
Q

Which virus replicates outside of the nucleus

A

Pox virus

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24
Q

What’s the larges DNA virus

A

Pox virus

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25
What’s the smallest DNA virus
Parvo virus According to the slide- Polyoma is smaller
26
Which virus is not a retro virus but has a reverse transcriptase
HBV
27
What does the adeno virus cause (6)
Febrile pharyngitis Myocarditis Conjunctivitis Pneumonia Gastroenteritis Acute hemorrhagic cystitis
28
What does HPV cause
Warts, cancer (cervical, penile, anal and oripharyngeal)
29
What HPV serotypes is associated with warts
Serotypes 1, 2, 6, 11
30
What HPV serotypes are associated with cancer
Serotypes 16, 18
31
What’s the JC virus and what does it cause
Human polyoma virus 2/ John Cunningham Virus It causes Progressive multi focal leukoencephalopathy in HIV
32
What’s BK virus as what does it cause
A type of the polyoma virus and it attack transplant patients , mostly kidney transplants
33
What’s the B19 virus and what does it cause
A type of par over Causes Aplastic crises in sickle cell disease Slapped cheek rash in children (erythema infectiosum, of filth disease) Infects RBC precursors and endothelial cells
34
What’s HBV and what does it cause
Hepatitis B virus , a type of Hepadna virus and it causes acute or chronic hepatitis
35
What are three diseases caused by the pox virus
Small pox Cowpox Molluscum contagiosum (A viral skin infection that results in round, firm, painless bumps.)
36
What’s the Breakdown of RNA viruses
RNA virus (+)RNA. (-)RNA. (+/-)RNA. (+)RNA via DNA (+)RNA Enveloped Corona v. (L) (H) Toga v. (L) (I) Flavi v. (L) (I) Unenveloped Picorna v. (L) (I) Calici v. (L) (I) (-) RNA Enveloped Bunya v. (3S) (c) (H) Arena v. (2S) (c) (H) Orthomyxo v. (8S) (L) (H) Paramyxo v. (L) (H) Filo v. (L) (H) Rhabdo v. (L) (H) (+/-) RNA Double capsid Reovirus(s) (L) (I) (+) RNA via DNA Enveloped Retro virus (L) (I)
37
What is Colti virus and what does it cause
A type of Reo virus that causes Colorado tick fever
38
What’s Rota virus and what does it cause
A type of reovirus that causes fatal diarrhea in children
39
What’s the medical importance of picorna virus
Poliovirus- polio-Salk/Sabin vaccines-IPV/OPV Echovirus-- aseptic meningins Rhinovirus- "common cold" Coxsackievirus- aseptic meningitis; herpangina (mouth blisters, fever); hand, foot, and mouth disease; myocarditis; pericarditis HAV- acute viral hepatitis PERCH
40
What virus causes the common cold
Rhino virus a type of the picorna virus
41
What’s the Coxsackie virus and what does it cause
A type of the Picorna v Causes Herpangina, aseptic meningitis, mouth , feet and hand disease,myocarditis, pericarditis
42
What’s Echovirus and what does it cause
A type of Picorna virus that causes aseptic meningitis
43
What’s HAV and what does it cause
A type of Picorna virus that causes acute viral hepatitis
44
What’s the HEV virus
A type of the hepeviruz
45
What’s the norovirus
A type of the caliciviruses that cause viral gastroenteritis
46
What’s the medical importance of the flavi virus
HCV Yellow fever" Dengue" St. Louis encephalitis" West Nile virus*- meningoencephalitis, flaccid paralysis Zika virus"
47
What’s the medical importance of the toga virus
Toga CREW-Chikungunya virus* (co-infection with dengue virus can occur), Rubella, Eastern and Western equine encephalitis
48
Examples of retro virus
HTLV-T-cell leukemia complex HIV-AIDS
49
Types of retro viruses
HTLV-T-cell leukemia complex HIV-AIDS
50
Types of coronavirus versus
SARS, MERS, COVID
51
Example of orthpmyxo virus
Influenza virus
52
Types of paramyxo virus
Parainfluenza-croup RSV-bronchiolitis in babies Measles, Mumps
53
Example of rhabdo virus
Rabies
54
Example of Filo virus
Ebola/Marburg hemorrhagic fever-often fatal.
55
Examples of arena viruses
LCMV-lymphocytic choriomeningitis virus Lassa fever encephalitis-spread by rodents
56
Examples of Bunya virus
California encephalitis" Sandflv/Rift Valley fevers" Crimean-Congo hemorrhagic fever" Hantavirus- hemorrhagic fever, pneumonia
57
What’s peculiar about the Delats virus
HDV is a "Defective" virus that requires the presence of HPV to replicate
58
Classify the Corona Virus fully
It’s a single stranded enveloped (+) helical virus that’s linear
59
What’s the size of a virus
ranging from about 20 nm to 300 nm in diameter
60
What’s the name of the global system for naming and identifying virus
International Committee on Taxonomy of viruses (ICTV)
61
What’s the suffix used for the order of a virus
Virales
62
What’s the suffix used for the family of the virus
Viridae
63
What’s the suffix used for the subfamily of a virus
Virinae
64
What’s the suffix used for genus and species
Virus
65
How many DNA and RNA families are recognized in humans
7 DNA and 14 RNA families
66
Classify the taxonomy of the Ebola virus fully
•Order: Mononegavirales •Family:Filoviridae •Genus: Ebolavirus •Species: Ebolavirus zaire
67
Give 3 families under the Order of mononega virales
Filo viridae Paramyxo viridae Rhabdo viridae
68
Classify the taxonomy of the herpes virus
•Order: Herpesvirale •Family: Herpesviridae •Subfamily: Alphaherpesvirinae •Genus: Simplexvirus •Species: Herpes Simplex virus type 1
69
What’s the size of the parvo virus
5.6 kb
70
What’s the size of the polyoma virus
5 kbp
71
What’s the size of the papilloma virus
8 kbp
72
What’s the size of the Hepadna virus
3.2 kbp in size.
73
What’s the size of the herpes virus
125–240 kbp
74
What’s the size of the adeno virus
26-45kbp
75
What’s the size of the pox virus
130-375kbp
76
Example of herpes virus
Varicella-Zoster virus, Human Cytomegalovirus
77
Example of a genus under adenoviride
Mastadenovirus
78
Example of genus under herpes virus
Simplex virus, Varicello virus, Cytomegalovirus, Roseolovirus, Lymphocrypto virus
79
Example of genus under parvo viridae
Parvovirus, Erythrovirus, Dependovirus
80
Genus under pox viridae
orthopox, suispox, avipox, mollusci pox
81
Example of genus under Arena viride
Arenavirus e.g Lassa , Mopeia, Junin, Machupo
82
Example of genus under bunya viridae
Bunyavirus, Nairovirus, Hantanvirus, Phlebovirus
83
Examples of genus under calici viridae
Norwalk, Hepatitis E virus
84
What are the genus under corona viridae
:Coronavirus, SARS virus
85
What are the genus under filo viridae
Ebola, Marburg
86
What are the genus under flavi viridae
Yellow fever virus, dengue virus, West nile virus, Hepatitis C Virus
87
What are the genus under orthomyxo viridae
Influenza virus A,B,C
88
What are the genus under Paramyxo viridae
Parainfluenza, Human metapneumovirus, Mumps
89
What are the genus under Picorna viridae
Enterovirus, Hepatovirus, Rhinovirus
90
What’s the genus under reoviridae
Rotavirus
91
What are the genus under retro viridae
Lentivirus, (spp – HIV),
92
What are the genus under rhabdo viridae
Rabies virus, Lyssavirus, Vessiculovirus
93
What are the genus under toga viridae
Alphavirus (Chikungunya), Rubivirus (Rubella virus)
94
What’s the size of the picorna viridae
28–30 nm 7.2–8.4 kb in size.
95
What’s the size of the orthomyxo viridae
80- to 120nm in diameter 10–13.6 kb in size
96
What’s the size of the paramyxo viridae
16–20 kb in size.
97
What’s the size of the Filo viridae
80 nm wide and about 1000 nm long. 19 kb
98
Whats the size of the flavi viridae
28–30 nm diameter 7.2–8.4 kb in size
99
What’s the size of the retro viridae
80–110 nm in diamete
100
Which virus is ether resistant
Flavi viridae and Picorna viridae
101
What inhibits Herpes replication
Acy-clovir
102
Segmented DNA
Herpes Papilloma
103
Largest RNA
Corona 30
104
Smallest RNA
Astro virus
105
Ambisemse RNA Can heave either - or +
Arena Bunya Reo virus
106
What inhibits HIV replication
Efavirenz