Infectious diarrhoea II Flashcards
Broadly describe the types of IC pathogens with examples and the advantages of being IC
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Intracellular pathogens invade host cells and proliferate inside them:
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Facultative intracellular pathogens benefit from intracellular location, but it is not obligatory.
- e.g., Salmonella spp.
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Obligate intracellular pathogens cannot survive outside human host cell, require host products for growth, can only reproduce when inside cell host.
- e.g., Chlamydia spp.
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Facultative intracellular pathogens benefit from intracellular location, but it is not obligatory.
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Advantages of intracellular lifestyle:
- Access to host nutrient supply
- Escape from host defences
- Protection from antibiotics
Broadly describe the mechanism of invasion fo IC patogens
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How do intracellular pathogens gain entry into cells?
- Intracellular pathogens gain access to IECs via M cells (recall from [[Microbiology B5 - Lecture 4]], take up antigens via endo/phagocytosis).
- Intracellular pathogens gain access to macrophages via M cells.
- Macrophages used for dissemination via lymphatic ducts of intestines to other regions of the body.
- Dissemination can also occur via intercellular spread.
- Pathogen-mediated internalisation (non-phagocytic cells)【Murphy et al. (2008)】
Describe the general characteristics of shigella
- Non-motile, Gram-negative rod
- Facultative anaerobes
- Resistant to gastric acid and bile salts
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Non-lactose/xylose fermenting
- Inability to ferment xylose can be used to distinguish Shigella spp. from Salmonella spp. (black colonies) from clinical samples and from food using Xylose Lysine Desoxycholate (XLD) agar (red colonies)
Describe shigella taxonomy
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Four species:
- Shigella sonnei (most infections: mild form of disease)
- Shigella flexnerii (more severe form of the disease)
- Shigella boydii (more severe form of the disease)
- Shigella dysenteriae (most serious form of the disease)
- Human pathogens exclusively – no animal reservoirs.
- No environmental reservoirs.
- Faecal-oral spread, contaminated foods, *flies act as mechanical vectors.
Describe shigellosis
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Primarily a paediatric disease in developing countries.
- Acute onset: Incubation 1–4 days, Duration 2–3 days.
- Small infective dose (10-100 organisms).
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Epidemics occur due to overcrowding and insufficient sanitation.
- Refugee camps, nurseries, day-care centres and other residential facilities
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Symptoms:
- Spectrum: Mild to severe depending on the species (As well as host factors)
- (+/-) Fever, abdominal cramps, severe and bloody diarrhoea - especially with dysentery, often with pus (PMNs) and mucus ^[stool MCS shows leucocytes]
- Inflammatory diarrhoea: due to invasion
- Osmotic diarrhoea: due to loss of absorptive surface
Describe shigella virulence factors
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Invasiveness:
- Intracellular survival, multiplication, and intercellular spread
- Shigella can lyse the phagocytic vacuole (phagosome) and replicate in the cytoplasm
- in this way it can escape host defences
- Type III secretion system and effector proteins required for invasion and escape from the vacuole
- AB5 exotoxin (Shiga toxin) and other toxins (e.g., SigA)
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IcsA autotransporter:
- Outer membrane protein
- Localised at pole of bacterium
- Facilitates host-actin polymerisation, brings pathogen closer to epithelial cell, thereby faciltiating intracellular spread【Sansoneh (2004)】
Describe EIEC general featuers
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EIEC and Shigella are genotypically nearly identical.
- Have same virulence factors and strategies
- Cause a syndrome identical to Shigellosis
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EIEC can be differentiated from Shigella only by a very limited number of tests based on utilisation of different nutrients, including utilisation of serine, xylose and/or sodium acetate, and mucate fermentation
- EIEC isolates may be positive for one or more of the tests but Shigella are generally negative
- Do not fit the full definition for the “genus” Shigella
Describe salmonella genearl acharacterisitcs
- Motile, Gram-negative rods
- Facultative anaerobes
- Resistant to bile salts, although poor resistance to acids ^[contrast with [[#Shigella General Characteristics]]]
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Non-lactose fermenting, but do ferment xylose
- XLD agar can be used to differentiate Salmonella from Shigella
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Grow within a wide temperature range (≤54°C)
- Grows optimally at 37°C
- *Psychrotrophs (2-4°C)
Describe salmonella taxonomy
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Taxonomy based on genomic relatedness show that there are two Salmonella species:
- S. bongori
- S. enterica
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S. enterica has a further 6 subspecies:
- S. enterica subspp. arizonae
- S. enterica subspp. diarizonae
- S. enterica subspp. enterica
- S. enterica subspp. houtenae
- S. enterica subspp. indica
- S. enterica subspp. salamae
- There are >2500 serovars/serotypes for S. enterica.
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Most of the pathogenic Salmonella serovars are found within S. enterica subspp. enterica
- e.g., S. enterica subspp. enterica serovar Typhimurium generally shortened to S. enterica serovar Typhimurium, and Salmonella paratyphi ?.
Describe classification of salmonella disease
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Non-typhoidal: Cause acute gastroenteritis
- Most infections caused by S. enterica serovar Typhimurium and S. enterica serovar Enteritidis.
- Large animal reservoir, transmitted to humans via food in developing and developed countries.
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Typhoidal: Cause enteric (typhoid/paratyphoid) fever
- Most infections caused by S. enterica serovar Typhi and S. enterica serovar Paratyphi.
- S. enterica serovar Typhi associated with asymptomatic carriage (gall bladder usually the reservoir).
- Infect humans only, common in developing countries/areas of poor sanitation, faecal-oral route of transmission.
Describe salmonellosis gastroenteritis
- Most common form of salmonellosis in developed countries, typically associated with low mortality.
- High infectious dose (~10^5 cells)
- Incubation: 2-7 days, Duration: 2-7 days
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Symptoms: vomiting, fever (more with Typhi), abdominal cramps, watery diarrhoea with PMNs
- Inflammatory diarrhoea: due to invasion
- Osmotic diarrhoea: due to loss of absorptive surface - similar mix to shigellosis diarrhoea
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Usually self-limiting, antibiotics not prescribed unless:
- Extraintestinal disease develops (typically bloodstream infection)
- Severe gastroenteritis * * * *
- Infants and immunosuppressed individuals
Typical Sources of Non-Typhoidal Salmonella
- Commensals in birds (and other animals)
- Poultry meat and eggs are common sources of infection
Describe salmonellosis enteric fever
- In Australia, most cases are acquired overseas i.e. returned travellers
- Low infectious dose (10–100 organisms)
- Incubation: 7–28 days (Typhi), 1–15 days (Paratyphi)
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Symptoms: Prolonged fever, vomiting, abdominal cramps, diarrhoea with PMNs, headache, myalgia, nausea, (+/-) rash of flat rose-coloured spots.
- Inflammatory + Osmotic diarrhoea
- Humans are the only hosts for these species
- Transmission: Faecal-oral route and person-to-person spread by chronic carrier
- After infection, people can carry the organisms for months to years
Describe treatment of typhoidal salmonellosis
- Antibiotics should be started as soon as enteric fever has been confirmed.
- Identify and treat carriers of S. enterica serovar Typhi and S. enterica serovar Paratyphi:
- Antibiotics
- Or cholecystectomy (if antibiotics fail); sometimes patients will elect to do this
- Ideally, Typhoid carriers should be excluded from jobs involving food handling and preparation.
Describe salmonella virulence strategies
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Invasiveness:
- Intracellular survival and multiplication in intestinal epithelium and macrophages.
- Type III secretion system and effector proteins (SPI-1) required for initial invasion into intestinal epithelium.
- Type III secretion system and effector proteins (SPI-2) required for replication in intestinal epithelium and macrophages.
- LT-like toxin and other enterotoxins.
- Capsule (S. enterica serovar Typhi only).
Describe the lifecycle of typhoidal salmonella (ie. in systemic infectons)
- Organism is consumed.
- Enter lamina propria via M cells.
- Taken up by macrophages.
- Migrate in macrophages to mesenteric lymph nodes and multiply.
- Released into the bloodstream (1° bacteraemia, low level, typically asymptomatic).
- Removed from blood by macrophages in spleen, bone marrow, liver; multiply and re-enter bloodstream (2° bacteraemia, onset of symptoms i.e. headache, malaise, fever).
- Re-enter GIT via gall bladder, replicates asymptomically but enters GIT and sheds, or causes bouts of typhoid fever