Immunology Flashcards
Exam 1
What are the two different immune systems?
Innate IS
Adaptive IS
What is the function of the innate IS and give the cells that work in it?
An older system based in inflammation which everyone has the same innate immunity, which is ready to act immediately
Myeloid cells e.g. neutrophils, (other ..phil endings) lymophocytes: Natural killer cells
What is the function of the adaptive IS and give the cells that work in it?
A newer system which is based on antigen recognition, where it is acquired after time
Lymphocytes e.g B-cells and T-cells
What are the three main differences between the adaptive and the innate IS?
- Innate lacks memory, Adaptive has memory
- Innate not very specific, can identify bacteria not what type
- Innate has very few receptors (toll-like, mammose receptors), adaptive has unlimited T and B cells
Name the three main lymphocytes and which immune system they dominate in:
T cells- Adaptive
B cells- Adaptive
NK cells- Innate
Is a T-cell humoral or cellular?
Cellular
Is a B-cell humeral or cellular?
Humoral, so soluble
Which immune system can form a memory response?
Adaptive IS
What are 5 physical barriers that prevent pathogens from entering the body?
-Skin
-Competition of non-pathogenic bacteria
-pH, sweating decreases pH so can’t survive
-Temperature
-Host- specificity
What are zymogens?
Enzymes in the blood system which aren’t active. They need to be cleaved to become activated
Describe the initiation and activation steps of the complement system in the classical pathway:
Microbe is identified by antibody/ sugars and C1q protein detects this
C1q binds to antibody- antigen complex and becomes activated
C1q cleaves C4 into C4a+C4b
C2 binds to C4b (which is bound to the microbe) ands C1q cleaves C2 into C2a+C2b (C2b stuck to C4b)
This forms C3 convertase, this cleaves C3 which forms C3a+C3b (C3b binds to C3 convertase which forms C5 convertase)
C5 binds to C3b which C5 convertase forms C5a+C5b, C5b reunites with C6, C7, C8 and C9
What are the purposes of C3a and C3b in the immune response?
Inflammatory peptides, which leads to chemotaxis
What is the purpose of C3b in the immune response?
Binds to the surface of the microbe which helps macrophage identify bacteria, opsonization
What is the purpose of C5b in the immune response?
Reunites with C6, C7, C8 and joint with C9 together to form a pore in the bacteria which leads to destruction, cytolysis
How is the membrane attack complex formed?
C5b recruits C6, C7 and C8, they bind to the bacteria membrane and then between 8 and 16 C9 proteins comes along and form a pore in the bacterium, leading to destruction
Describe the initiation and activation steps of the complement system in the lectin pathway:
Instead of C1q, MBL binds as it can identify the mannose found on the bacteria (Mannose Binding Lectin)
Then MBL cleaves C4 to C4a +C4b (bound to microbe)
C2 binds to C4b (which is bound to the microbe) ands MBL cleaves C2 into C2a+C2b (C2b stuck to C4b)
This forms C3 convertase, this cleaves C3 which forms C3a+C3b (C3b binds to C3 convertase which forms C5 convertase)
C5 binds to C3b which C5 convertase forms C5a+C5b, C5b reunites with C6, C7, C8 and C9
Describe the initiation and activation steps of the complement system in the alternative pathway:
Proteins B,P and D bind to pathogen
C3 is bound to protein B
C3 convertase cleaves C3a+C3b
B binds to C3b to form C5 convertase into C5a +C5b
What are the three outcomes of the complement system?
Inflammation from C3a (anaphylatoxin) and C5a
Opsonization from C3b
MAC, Membrane Attack Complex, from C5b, C6, C7, C8 and C9
What does the C stand for in the C1q etc proteins:
Complement
How many TLRs are there?
Atleast 10
TLR1- TLR10
What do TLRs cause?
Production of cytokines, reactive oxygen intermediates, which causes the killing of the microbe
Where are Toll Like Receptors found and why?
Sentinel cells which are likely to have first contact with the pathogen
Macrophages, mast cells, dendritic cells
How can TLRs recognise pathogens?
Recognises pathogenic RNA/ DNA
Recognises other pathogen components e.g cell wall
TLR2- binds to bacterial lipoproteins
TLR4- binds to lipopolysaccharides
TLR5- binds to bacterial flagellum
Recognises Damage Associated Molecular Patterns (DAMPs), which are released when host cells are damaged
What is the name given to a cell which can divide and differentiate into any type of blood cell and where does it happen?
Pluripotent haematopeitic stem cell in bone marrow
What is the difference between 1º lymphoid tissue and 2º lymphatic tissue?
1º- tissue where lymphocytes are generated and mature
2º- tissue where immune responses are initiated
How many lymph nodes are there?
500-600
What are the 3 functions of the lymph system?
Removal of excess fluids from body tissues
Absorption of fatty acids and transport of fat to circulatory system
Production of immune cells
How does Interferon kill cells?
When a cell is infected it releases interferon, which spreads information to other cells
Cells can produce enzymes to kill the virus (not always)
Interferon can activate B-cells (NK Cells) which kills the infected cells
Interferon will lead to a down regulation of MHC class 1
Describe the IFN- system:
IFN- receptor expressed in cell surface of cells
Only become activated if IFN present
Once bound, IFN-R becomes activated and phosphorylates itself
Other proteins are phosphorylated, JAK (Janus-kinases) and STAT which causes INF- induced genes, which changes gene expression in the nucleus
Describe 3 examples of Interferon induced genes:
- Oligoadenylate- synthetase: polymerises ATP to 2’-5’ oligomers, so RNase (ribonuclease) L is activated, which destroys viral RNA
- P1- Kinase: phosphorylates protein synthesis’ initiation factor elF-2 so stops translation of viral DNA/RNA
- Mx protein: inhibits virus replication of RNA virus
How are prostaglandins released?
IL-1 by macrophages
How are prostaglandins made?
Phospholipids: stimulus activates phospholipase- A2 which hydrolyses phospholipids which produces arachidonicacid, this is then broken down by COX-1 (into lipoxygenases and leukotrienes) and COX-2 (into prostaglandins) enzymes
Name 3 types of prostaglandins which cause inflammation, fever and pain:
Overload of PEG2, PGI2, TXA2 from COX-2
What are 5 symptoms of inflammation?
Rubor- redness
Dolour- pain, prostaglandin release
Calor- heat
Tumour- swelling
Function laesa- loss of function
Describe progressive activation at the site of inflammation:
Due to complement activation when in infection C3a and C5a along with other chemoattractants released in blood stream on the endothelium
Polymorphonuclear leukocyte migration
Leukocyte attracted to these and attaches
Once captured they then roll on the wall slower until firm adhesion
They then transmigrate through layers of endothelium and into tissue, leads to swelling and release of prostaglandins
What is the first stage of inflammation?
Vasodilation of blood vessels
This is triggered by mast cells; histamine, kinins and cytokines IL-1 and TNF-alpha
This means more blood can migrate and marginate
Diapedesis (emigration): phagocytes and other blood components force themselves between the endothelium of the blood vessels and migrate into the tissue
What is the second stage of inflammation?
Phagocytes are attracted via chemokine and chemotaxis
They destroy any pathogens/ mutated or dead cells
Tissue repair is then happening on damaged cells
What are the components of neutrophile granulocytes?
The most common leukocyte in blood
For acute inflamed tissue
Multiple segmented nuclei (granules)
Short lifespan, 5 days
Have antibacterial enzymes e.g lysosomes
What are the components of macrophages
Found in tissues and organs
Long life span, months/ years
Phagocytosis
Release cytokines/ chemokines
Recognise carbohydrate structures, PAMP = pathogen Associated Molecular Patterns (common products produced by pathogens)
What are monocytes and where are they found?
Young macrophages, found in the blood
Describe the steps in phagocytosis:
Macrophage engulfs microbe by plasma membrane, forming a phagosome (vesicle)
Lysosome attaches and forms a phagolysosome and digests the microbe
Anything indigested is released
What are NK cells and what is one way how they work?
Natural killer cells
Kills an infected cell by identifying the cell and killing it
What is another way in how an NK cell can kill an infected cell?
NK cell attaches to the macrophage with microbe inside of it
Macrophage releases IL-12, which binds to the NK receptor which releases cytokine IFN-gamma
This helps the macrophage kill the bacteria and not itself
What two receptors do NK cells have?
Activating and Inhibitory receptor
Why is there no MHC class 1 when viruses are present?
MHC class 1 is a protein and viruses stop protein production
Where does each receptor of an NK cell bind to in a normal cell?
Both receptors bind
Inhibitory receptor binds to MHC class 1 protein found on all human cells apart from RBC’s
This binding allows the survival of the cell
How does the inhibitory cell binding in an NK cell to a normal cell stop the killing of it?
Binding produces phosphotase which removes phosphate from tyrosine kinases which normally causes the killing
How to NK cells kill viruses?
Viruses don’t normally have the MHC class 1 on them so won’t be able to have the essential binding of the inhibitory receptor and therefor will kill the virus by shutting down the activating receptor
What does MHC stand for and give another name for it:
Major Histocompatability Complex
Also be called HLA
Where is MHC class 1 protein found?
On all cells, marker for all cells
Where is MHC class 2 protein found?
On macrophages, B- cells
What is the function of MHC 1?
Helps activate only CD8 positive T-cells find antigens and present them on T- cells
What is the function of MHC 2?
Helps activate only CD4 positive T-cells, find antigens and present them on T-cells
Where are T-cells able to bind?
ONLY things presented in MHC complexes
What do B-lymphocytes do?
Block infections and eliminate extracellular microbes
What do T-helper lymphocytes do?
Activate macrophages to kill phagocytosed microbes
What do T-cytolytic lymphocytes do?
Kills infected cells and illuminate reservoirs of infection
Describe one way an antigen is captured and presented by a T-cell:
Microbe will be present on the skin
Dendritic cells capture the microbe and moves to lymph nodes which there lots of B and T cells will present antigen towards the T-cell
Describe another way an antigen is captured and presented by a T-cell:
Antigen enters the blood stream and into the spleen, which in there the antigen capturing cells eat the pathogen, forms an MHC complex and presents it on surface for T-cells
What are the functions of immature dendritic cells and where are they found?
Found in the epidermis
They are good at hoovering antigens by makropinocytosis or phagocytosis
What are the functions of mature dendritic cells and where are they found?
When migrate to the lymph (via lymphatic vessels) and spleen they mature
Good at MHC expression and B7 expression
Good at adhesion molecules
Good at expression to naive T cells
How does a Class 2 MHC allow the pathway of intracellular processing of a pathogen?
Endocytosis of an extracellular microbe occurs and an endocytic vesicle forms
Class 2 MHC forms in the ER and MHC forms a vesicle and fuses with the endocytic vesicle and displayed on the surface of the cell ready to engage with a CD4+ T-cell
How does a Class 1 MHC allow the pathway of intracellular processing of a pathogen?
The microbe is present in the cytosol
The microbial protein unfolds and peptides present in cytosol
Class 1 MHC forms in the ER and binds to peptides in cytosol
MHC- peptide complex is transported to cell surface and presented to CD8+ T-cell
What are the differences between an MHC class 1 pathway of intracellular processing and MHC class 2?
In 1, the microbe is present in the cytosol
In 2 the microbe is outside the cell and is moved in by phagocytosis and in a vesicle in the cytosol
Where are T-cells produced?
Bone marrow
Where do T-cells mature and then where do they go after?
Mature in the Thymus and then into secondary lymphatic organs, blood, spleen
How are T-cells developed?
From thymocytes, a and B TCR recombination occurs
Beta recom= CD4- and CD8-
Alpha recon= CD4+ and CD8+
Positive and negative selection occurs with TCR+
How are T-cells chosen in positive and negative selection?
If weak (good) bond with MHC II, then CD4+, if weak (good) bond with MHC I, then CD8+, positive selection
Why is a weak bond with T-cells and MHC better than a strong bond?
A strong bond leads to activation without antigen and leads to damage, negative selection
What type of T-cells are CD4+?
Helper cells
What type of T-cells are CD8+?
Cytotoxic cells