IMMS Flashcards
how much energy can be obtained from carbohydrates?
4kcal/gram
how much energy can be obtained from protein?
4kcal/gram
how much energy can be obtained from alcohol?
7kcal/gram
how much energy can be obtained from lipid?
9kcal/gram
what is the basal metabolic rate?
the amount of energy required to keep the body alive at rest
what is the energy required to maintain the basal metabolic rate?
1 kcal/kg body mass/hr
what factors can increase BMR?
1) high BMI
2) hyperthyroidism
3) fever/infection
4) pregnancy
5) exercise
what factors can decrease BMR?
1) ageing
2) being female
3) starvation
4) hypothyroidism
where does glycolysis take place?
cytosol
what is the overall equation for glycolysis?
glucose + 2ADP + 2Pi + 2NAD+ -> 2 pyruvate + 2ATP + 2NADH + 2H + + 2H2O
what happens to pyruvate under aerobic conditions?
pyruvate will enter the krebs cycle and undergo oxidative phosphorylation
what happens to pyruvate under anaerobic conditions?
pyruvate will convert to lactate and the lactate will undergo lactic acid fermentation
how many molecules of ATP is produced in aerobic respiration?
38
how many molecules of ATP is produced in anaerobic respiration?
2
what are the three ways that substrates can enter glycolysis?
- dietary glycose
- glycogenolysis
- other monosaccharides
what is dietary glucose?
glucose is directly absorbed into the bloodstream from the gastrointestinal tract and enters the pathway
what is glycogenolysis?
glucose is released from hepatic stores of glycogen and enters the pathway
what is hepatic?
relating to the liver
what are ‘other monosaccharides’ and how do they enter glycolysis?
galactose and fructose
enter glycolysis at various levels via common intermediates
where does galactose enter glycolysis?
in the first stage where it is converted to G6P
Why can glycogen in skeletal muscle only serve the individual muscle cells it is stored in?
glycogen in skeletal muscle cannot be fully broken down into glucose and therefore cannot leave the cell
why are glucose transporters required?
to allow glucose to pass from the extracellular space (bloodstream) to the intracellular space to be used by cells
what is Km?
the substrate concentration at which the reaction rate is 50% of the Vmax
what are the names of the four different types of glucose transporters?
- GLUT-1
- GLUT-2
- GLUT-4
what is a key feature of GLUT-1 and why is it important for its purpose?
has a low Km and therefore is active at low levels of glucose, which means it maintains the basal metabolic rate when glucose levels are low
where is GLUT-1 located?
all cells
what is a key feature of GLUT- 2 and why is it important for its purpose?
this means it can act as a glucose sensor and increases uptake in high glucose levels for storage. it also regulates the insulin release from pancreas
where is GLUT-2 found?
liver and pancreatic islet
what is a key feature of GLUT- 4 and why is it important for its purpose?
insulin dependant and therefore increases the uptake of glucose in the presence of insulin
what is the first reaction in glycolysis?
glucose is phosphorylated by hexokinase to form glucose-6-phosphate (G6P) using a molecule of ATP
what stages of glycolysis ca be inhibited and why?
stages1
why is glucose phosphorylated?
the phosphate introduces a negative charge which traps G6P in the cell as it cannot pass through the membrane
is stage
what is the first stage inhibted by?
product inhibition; higher concentrations of G6P inhibit hexokinase and slow the reaction
what is the name of the enzyme that inhibits stage 1 in the liver?
glucokinase
what is the second reaction of glycolysis?
G6P is converted into fructose-6-phosphate by glucose isomerase
where does fructose enter glycolysis?
during the second reaction of glycolysis (where fructose-6-phosphate is made)
what is the third step of glycolysis?
fructose-6-phosphate is phosphorylated by phosphofructokinase into fructose-1,6-bisphosphate using a molecule of ATP
how is the third step of glycolysis regulated?
- allosterically inhibited by ATP and activated by AMP
- phosphofructokinase is inhibited by glucagon, whilst insulin activates the enzyme
what is the forth step of glycolysis?
fructose-1,6-bisphosphate is converted into glyceraldehyde-3-phosphate (GA3P) and dihydroxyacetone phosphate (DHAP)s by fructose-bisphosphate aldolase
what is the fifth stage of glycolysis?
DHAP is converted into a second molecule of GA3P by triose phosphate isomerase
what is the sixth stage of glycolysis?
GA3P is converted into 1,3-bisphosphoglycerate (1,3-BPG) by glyceraldehyde phosphate dehydrogenase, producing a molecule of NADH
what is the seventh stage of glycolysis?
1,3-BPG is converted into 3-phosphoglycerate (3PG) by phosphoglycerate kinase, , generating a molecule of ATP
what is the eighth stage of glycolysis?
3PG is converted into 2PG by phosphoglycerate mutase
what is the ninth stage of glycolysis?
2PG is converted into phosphoenolpyruvate by enolase
what is the tenth stage of glycolysis?
phosphoenolpyruvate is converted into pyruvate by pyruvate kinase, yielding a second molecule of ATP
what happens during the Link Reaction?
pyruvate is then decarboxylated and dehydrogenated to form acetyl-coA by the pyruvate decarboxylase complexv
what is the first stage of the Krebs Cycle?
acetyl CoA (two-carbon molecule) joins with oxaloacetate (four-carbon molecule) to form citrate (six-carbon molecule) by citrate synthetase
what is the second stage of the Krebs Cycle?
citrate is converted to isocitrate (an isomer of citrate) by aconitase
what is the third stage of the Krebs Cycle?
isocitrate is oxidised to alpha-ketoglutarate (a five-carbon molecule) forming CO2 and NADH. the enzyme responsible is isocitrate dehydrogenase
what is the rate limiting step of the Krebs cycle?
the stage where alpha-ketogluterate is formed as isocitrate dehydrogenase can be allosterically inhibited (rate limiting step)
how can the Krebs cycle be regulated?
- metabolites: products of the cycle provide negative feedback on the enzymes that catalyse it eg. NADH inhibits the majority of the enzymes found in the cycle
- citrate: inhibits phosphofructokinase, a key enzyme in glycolysis. this reduces the rate of production of pyruvate and therefore of acetyl-CoA
- calcium: accelerates the TCA cycle by stimulating the link reaction
what is the fourth stage of the Krebs cycle?
alpha-ketoglutarate is oxidised to form a four-carbon molecule that binds to coenzyme A, forming succinyl CoA. this releases NADH and CO2. the enzyme involved is a-ketogluterate dehydrogenase
what is the fifth stage of the Krebs Cycle?
succinyl CoA is then converted to succinate (four-carbon molecule) and one GTP molecule is produced the enzyme involved is succinyl-coA synthetase
what is the sixth stage of the Krebs Cycle?
succinate is converted into fumarate (four-carbon molecule) and a molecule of FADH₂ is produced. the enzyme involved is succinic dehydrogenase
what is the seventh stage of the Krebs Cycle?
fumarate is converted to malate (another four-carbon molecule). the enzyme involved is fumerase
what is the eigth stage of the Krebs Cycle?
malate is then converted into oxaloacetate, producing another NADH. the enzyme involved is malate dehydrogenase
what is another usage of alpha-ketogluterate?
alpha-ketoglutarate can leave the cycle to be converted into amino acids
what is another usage of succinate?
succinate can be converted to haem
how many main complexes are located within the electron transport chain?
- I, II, III, IV, and V
what complex does NADH donate its electrons to?
I
what complex does FADH2 donate its electrons to?
II
what is complex V?
ATP synthetase
how are hydrogen ions pumped into the intermembrane space?
electrons being passed down complexes generates energy which is used to pump hydrogen ions into the intermembrane space. in doing so, a proton motive force is generated.
what happens when and after hydrogen ions are pumped into the intermembrane space?
an electrochemical gradient is generated which allows protons to re-enter the matrix via complex V (ATP synthetase)
how is ATP synthetised?
energy generated by hydrogen ions diffusing back into the matrix via complex V is harnessed, thereby creating ATP from ADP (oxidative phosphorylation)
how is the ETC naturally regulated?
1.when the concentration of ATP rises, there is less ADP for ATP synthase to use, which prevents large amounts of ATP being produced
2. when the concentration of ADP is high, there is a lot of ADP for ATP synthase to use and so more ATP is made
how and where is water formed in the ETC?
electrons combine with the hydrogen ions and oxygen to form water by complex IV
how can oxygen-free radicals accidentally form in the ETC?
electrons can leak out of the electron transport chain and can reduce oxygen, which can produce free radicals such as superoxide and hydrogen peroxide.
why does only glycolysis occur during anaerobic respiration?
without oxygen, the electron transport chain (ETC) cannot continue as there is no terminal electron acceptor. cessation of the ETC leads to reduced activity of the reactions before this step, such as the TCA cycle and glycolysis.
describe the process of anaerobic respiration
pyruvate is reduced to lactate (lactic acid) by NADH, yielding NAD+ by lactate dehydrogenase. NAD+ is recycled and glycolysis is able to continue as the supply of NAD+ has been replenished, yielding a net of 2 ATP molecules
why does anaerobic respiration happen faster than aerobic respiration?
less energy is produced for every molecule of glucose broken down (2ATP vs 32ATP), so more glucose must be broken down at a faster rate to meet energy demands
when may cells anaerobically respire?
during intense exercise, in ischaemic heart disease or when a malignant tumour outgrows its blood supply.
why is it important to remove lactate from the blood?
it is acidic and can cause muscle cramps
what are the ways in which lactate is removed from the blood?
- lactate is transported to metabolically active cells, such as in the heart and brain. it is converted back to pyruvate, which is then utilised in the Krebs cycle.
- lactate is transported to the liver and converted to pyruvate. pyruvate is then used in the process of gluconeogenesis to create more glucose
what is gluconeogenesis?
a metabolic pathway that results in the generation of glucose from non-carbohydrate carbon substrates such as lactate, glycerol and glucogenic amino acids
when does gluconeogenesis occur?
after around 8 hours of fasting when liver glycogen stores start to deplete and an alternative source of glucose is required
where does gluconeogenesis occur?
mainly in the liver and to a lesser extent in the cortex of the kidney
what are the precursors to gluconeogenesis?
- lacate
- glycerol
- amino acids
when does ketogenesis take place?
when there are carbohydrate shortages and increased beta oxidation has produces too much acetyl coA that has overwhelmed the Krebs cycle
when does fatty acid synthesis occur?
when there is an abundance of energy and acetyl coA builds up as high levels of ATP inhibits the Krebs cycle
where does fatty acid synthesis occur?
cytosol of the cell
describe the first stage of fatty acid synthesis?
oxaloacetate binds with acetyl coA to produce citrate, which can cross the mitochondrial membrane into the cytosol
what is the second stage of fatty acid synthesis?
citrate ligase converts citrate back into oxaloacetate, which then gets broken down into pyruvate and acetyl coA
what is the third stage of fatty acid synthesis?
pyruvate goes back into the mitochondria and is converted to oxaloacetate for Krebs
what is the final stage of fatty acid synthesis?
acetyl coA is converted into fatty acids
why and when does fatty acid metabolism occur?
in response to decreased blood glucose and high glucagon – mobilises fatty acids to target tissues
how many carbons do dietary fatty acids tend to have?
more than 14
what is the maximum number of carbons that cen be in fatty acids, which allows them to diffuse through the mitochondrial membrane?
12 (more than 12 cannot diffuse through and must be transported)
what is the carnitine shuttle?
the process by which acyl coA chains are converted and the reformed in order to cross the membrane
what is the process of the carnitine shuttle?
- acyl coA is converted to acylcarnitine by carnitine acyltransferase 1 (CAT1), which is found on the outer mitochondrial membrane.
- acylcarnitine is reformed to acyl coA by carnitine acyltransferase 2 (CAT2)
which is found on the interior side of the membrane - coA and carnitine are recycled
what is the purpose of beta oxidation?
to produce ATP, NADH and FADH2
describe the process of beta oxidation
the sequential removal of 2 carbon units by oxidation from acyl coA, where each round produces 1NADH, 1FADH2 and 1 acetyl coA
what happens to the products of fatty acid oxidation?
- FADH2 and NAD undergo oxidative phosphorylation
- acetyl coA re-enters the Krebs Cycle
why are ketone bodies used in preference to carbohydrates?
to help preserve glucose
describe the process of ketone synthesis
- two Acetyl-CoA’s are converted by thiolase to acetoacetyl CoA
- HMG-coA synthetase joins acetoacetyl coA with another acetyl coA to form 3-hydroxy-3-methyl-glutaryl-coA (HMG-CoA)
- HMG-CoA ligase breaks down HMG-CoA to acetoacetate
- acetoacetate degrades to acetone and can be converted by B-hydroxybutyrate dehydrogenase to -hydroxybutyrate
what is the rate limiting step of ketone body synthesis, and how is this regulated?
HMG-CoA synthase
increases with glucagon and decreases with insulin
how does diabetic ketoacidosis work?
a lack of insulin leads to glucose building up in the blood and not reaching cells. therefore, ketone levels are increased. as ketones are strong acids, it leads to ketone acidosis
what are some features and symptoms of diabetic ketone acidosis?
hyperventilation to remove acidic CO2
low pH, low pCO2, low CO3-, high pO2
where are sodium ions the most abundant?
within the extracellular fluid
what is the normal level of sodium ions in the plasma?
135-145 mmol/L (remember the odd numbers 135)
what is the normal intracellular sodium concentration?
10-12 mmol/L
why is maintaining the intracellular and extracellular sodium ion concentrations important?
- to maintain the resting membrane potential
- action potential propagation
- water travels in the direction of increasing sodium concentration by osmosis
what stimulates the renin-angiotensin-aldosterone system?
- reduced blood pressure
- reduced sodium concentration (as the blood has lower pressure and therefore there as more time for sodium re-absorption
where is renin released from?
granular cells of the juxtaglomerular apparatus
what does renin do?
renin converts angiotensinogen into angiotensin I, which is released from the from the liver
what converts angiotensin I to angiotensin II?
angiotensin converter ;enzyme
what does angiotensin II do?
- lead to arterial vasoconstriction to increase blood pressure
- increases the sensation of thirst
- stimulates an increase in the production of ADH
- stimulates the production of aldosterone
what does aldosterone do?
increases sodium reabsorption in ascending limb of LOH, which leads to water following, which increases blood pressure
what hormones remove excess sodium (and therefore reduce circulating blood volume)?
- atrial natriuretic peptide ANP
- brain natriuretic peptide BNP
how is ANP and BNP production stimulated?
raised blood volume and therefore pressure increases venous return and therefore stretches the atrial myocytes, which release ANP and BNP
how does ANP and BNP work?
- reduces aldosterone secretion from the adrenal glands
- reduces renin secretion from the juxtaglomerular apparatus
- dilating the afferent glomerular arteriole and constricting the efferent arteriole to increase blood pressure
therefore reducing the reabsorption of sodium ions from the DCT and the CD, helping to reduce blood pressure
how does anti-diuretic hormone work?
an increase in plasma osmolality is detected by osmoreceptors in the hypothalamus which stimulates the release of ADH from the posterior pituitary gland
this causes aquaporins to be inserted into the DCT and CD, increasing the reabsorption of water by osmosis
this leads to more concentrated urine
where is most of the sodium reabsorbed?
in the proximal convoluted tubule (~65%)
when and where is hypotension detected?
detected by baroreceptors in the carotid and aortic arch
what and where is hypovolaemia detected?
detected by reduced distension of atrial myocytes
what is hypovolaemia?
a decreased volume of circulating blood in the body
what do hypotension and hypovolaemia activate?
the sympathetic nervous system ; the increased reabsorption of sodium in the PCT, which increases fluid retention
what are the four pathways by which the sodium ion concentration can be regulated?
- renal sympathetic nerve activity
- renin-angiotensin-aldosterone system
- anti-diuretic hormone
- atrial natriuretic peptide and brain natriuretic peptide
what is hyponatraemia?
when the concentration of serum sodium decreases (<135 mmol/L)
what are some symptoms of hyponatremia?
- cerebral oedma (as water moves into the brain by osmosis)
- confusion
- headaches
- nausea
what is hypernatraemia?
when the sodium concentration in the serum increases (>145mmol/L)
what causes hypernatreaemia?
- dehydration
- increased water losses (eg. burns or diarrhea)
- kidney failure
what is the importance of maintaining K+ balance?
- maintain the resting potential of cells, as even as small change in the [K+] could lead to depolarisation/hyperpolarisation of cells
- important for maintaining cardiac function
what is the normal concentration of K+ in the ECF?
3.5-5 mmol/L (remmber 3-5 bananas)
what is the normal concentration of K+ in the ICF?
between 120-150 mmol/L intracellularly
where and what % is most of the K+ ions stored in?
98% of the body’s K+ is stored intracellularly
how are Na+/K+ movement controlled within cells?
Na+/K+ ATPase transmembrane pump which uses active transport to move 3 Na+ ions out of the cell (extracellularly) and 2 K+ ions into the cell (intracellularly)
what is produced in mitosis?
two daughter cells which are genetically identical to eachother and their parent cells
what is the first stage of mitosis?
prophase
what occurs during prophase?
- chromatin begins condensing into chromosomes
- mitotic spindles begin to form
- spindles attach to the centrosome
why does DNA need to condense into chromosomes?
to allow for easier separation in anaphase
what does a chromosomes look like?
two genetically identical chromatids, joined by a centromere
what are mitotic spindles made from?
microtubules
how many centrosomes are there within each cell?
2
what occurs during prometaphase?
- nuclear envelope begins to break down
- the spindle fibers attach to the centromere
what happens during metaphase?
- chromosomes alight at the metaphase plate (equator of the cell)
what happens during anaphase?
the spindle fibers contract, pulling the sister chromatids to the opposite poles of the cell
what happens during telophase?
- the nuclear envelope starts to reform
- chromosomes start to de-condense.
- spindle fibers break down
what happens during cytokinesis?
- the cytoplasm divides to form two new cells
- this happens by forming a cleavage furrow
what is produced during meiosis?
4 non-identical haploid daughter gametes
what happens during meiosis I?
homologous chromosomes are separated into two cells such that there is one chromosome (consisting of two chromatids) per chromosome pair in each daughter cell, i.e. two chromosomes total
what happens during prophase I?
- the nuclear envelope disintegrates
- chromosomes begin to condense
- spindle fibers appear
- crossing over occurs
what are the regions where crossing over occurs called?
chiasmata
what happens during prometaphase I?
spindle fibers attach to the chromosomes at the centromeres
what happens during metaphase I?
- homologous chromosomes align along the equator of the cell
- independent assortment occurs
what happens during anaphase I?
the homologous chromosomes are pulled towards the opposite poles of the cell as the spindle fibres contract
what happens during telophase I?
the nuclear envelope reforms and spindle fibres disappear
what happens during cytokinesis I?
the cytoplasm and cell divide resulting in two cells that are technically haploid
what happens during prophase II?
same as prophase I
what happens during prometaphase II?
same as prometaphase II
what happens during metaphase II?
chromosomes line up in single file along the equator of the cell
what happens in anaphase II?
sister chromatids are pulled to opposite poles of the equator
what happens in telophase II?
same as telophase I
what happens in cytokinesis II?
the cytoplasm and cell divide producing 2 non-identical haploid daughter cells
what is nondisjunction?
failed separation of chromosomes during anaphase, so either whole chromosomes (error occurring in meiosis I) or chromatids (error occurring in meiosis II) move to the same pole of the cell
what is monosomy?
having one copy of a chromosome, e.g. Turner syndrome (45, X)