Human Virology Flashcards

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1
Q

What do bacteriophages do to break through the tough layer of peptidoglycan and insert it’s DNA?

A

Release lysozyme which degrades peptidoglycan and enables the insertion of Viral DNA.

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2
Q

Differentiate between the ways viruses enter the host.
Direct penetration
Membrane fusion
Endocytosis

A

Direct Penetration - Virus without envelope attaches to cell by it’s capsid and sinks into the cell, by which the viral genome enters the cell.

Membrane fusion - Enveloped virus enters the cell in similar fashion to direct penetration, except envelope diffuses into cellular membrane and capsid and genome enter cell unscathed.

Endocytosis - Viral receptor attaches to host cell and triggers the host to engulf the virus allowing viral entry WITH it’s envelope. (Most common)

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3
Q

Why are viruses not considered “living” organisms?

A

They are considered non-living because they don’t do any metabolism extracellularly.

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4
Q

Why are Viruses considered “Darwinian machines”?

A

They are incredibly adaptable to change and can thrive amongst such changes. “Survival of the Fittest”

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5
Q

Viral disease is a failure of adaptation. Why?

A

Because survival of the fittest suggests that the most natures strives for adaptability. Virulent viruses are a failure of adaptation that seeks to destroy its host.

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6
Q

Differentiate between the metabolic capabilities of viruses and Cells.

A

Viruses have Ø metabolic capabilities on it’s own and require other cellular organism ATP

Cells use/create ATP, vitamins, lipids, nucleic acids, etc.

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7
Q

Differentiate between the reproduction of Viruses and Cells.

A

Viruses reproduce by assembling pre-formed components (Like lego)

Cells divide.

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8
Q

Differentiate between the hereditary material of Viruses and Cells.

A

Viruses have either single or double-stranded DNA/RNA (ssDNA, dsRNA, etc.)

Cells ALWAYS have dsDNA expressed into t/r/m/RNA

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9
Q

What distinguishing factors make viruses distinct from one another?

A

Different modes of replication

Different structures/sizes

Different range of possible hosts/cells (HIV -> T cells)

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10
Q

What is the Viral Capsid?

A

Protein coat for the virus that protects in and helps in entry to cells.

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11
Q

Explain the process of Membrane Fusion and how enveloped Viruses enter cells.

A

The viral envelope (Outer shell) fuses with the cell membrane of the host. The capsid and underlying genetic material enters the cell where the capsid disintegrates and the genetic material of the virus free floats.

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12
Q

For viral genomes to be synthesized inside host cells, what must be made to be read by host ribosomes?

A

mRNA molecules that can be translated by ribosomes

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13
Q

This can act directly as mRNA and can produce a negative complementary strand.

A

+ssRNA

acts as an mRNA that is read by host ribosomes.

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14
Q

What creates the complementary strand of -ssRNA for +ssRNA? What purpose does the -ssRNA strand have?

A

Viral RNA Polymerase

Acts as a template for the construction of +ssRNA

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15
Q

How are +ssRNA and retroviruses different?

A

Retroviruses do not use their +ssRNA genome as mRNA inside the host. They use reverse transcriptase on their +RNA to create DNA that serves as a template for further +RNA molecules

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16
Q

What significant issues is faced by -ssRNA viruses? How do they overcome this issue?

A

Host ribosomes can only read +RNA molecules, and they do not contain any within their genome.

Overcomes this issue by carrying RNA-dependent RNA Transcriptase which transcribes +RNA molecules from its -RNA genome… and business carries on as usual.

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17
Q

How do dsRNA viruses replicate?

A

+RNA molecule acts as mRNA for the translation of proteins, and creates RNA Polymerase that transcribes the dsRNA. Each strand acts as a template (Similar to DNA replication)

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18
Q
RNA polymerase synthesizes mRNA for all of the following Except:
A/ ssDNA
B/ dsRNA
C/ dsDNA
D/ All the above
A

B/ dsRNA

dsRNA synthesizes mRNA by its positive strand of RNA

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19
Q
Which of the following synthesizes its mRNA by using RNA dependent RNA Transcriptase?
A/ Retrovirus
B/ -ssRNA
C/ dsDNA
D/ dsRNA
A

B/ -ssRNA

transcribes +RNA molecules from its -RNA genome… and business carries on as usual.

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20
Q
\+ssRNA synthesizes its mRNA molecule by:
A/ RNA-dependent RNA transcriptase
B/ Using RNA polymerase
C/ Using its genome to act as mRNA
D/ Reverse transcriptase
A

C/ The +ssRNA can act as its own mRNA template to create complementary strands.

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21
Q
Reverse Transcriptase is used by which of the following to transcribe mRNA?
A/ Retrovirus
B/ -ssRNA
C/ dsRNA
D/ ssDNA
A

A/ Retrovirus

DNA synthesized from RNA by reverse transcriptase, mRNA transcribed from DNA by RNA polymerase

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22
Q

Explain the Lysogenic growth cycle of Viruses.

A

Viral DNA enters the cell but does NOT destroy host DNA. Rather, one piece of viral DNA is fused to another peice of host DNA and become part of the host chromosome. This inactive viral DNA is called a prophage. Every time the cell replicates, so is the prophage in the new cells; Therefore all daughter cells are infected with the virus. This process continues until environmental factors that harm the cell are triggered, in which the viral DNA removes itself from host chromosome and destroys the remaining host DNA. Then the viral genome promotes the formation of capsid proteins and then inserts itself into the newly formed components of phages that will be released from the cell during lysis and infect other cells. Restarting the whole process over again.

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23
Q

What does induction mean in the lysogeny cycle?

A

When viral DNA removes itself from host chromosome and begins to breakdown host DNA.

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24
Q

What does lysogenic conversion mean?

A

When lysogenic phages take a non-pathogenic cell and transform it into a pathogenic one.

25
Q

WHat are some factors that can affect host range of viruses?

A
  • Cell surface and viral attachment proteins available
  • Availability of replication machinery (Ability to replicate)
  • Ability to get out of cell and spread
  • Anti-viral response of host (immune system)
26
Q

Where does the Herpes virus reside after it enters the host?

A

Nerve ganglia where it remains dormant.

27
Q

This illness can recur as Shingles later in life when immune function is suppressed.

A

Varicella Zoster Virus (VZV)

Herpes Zoster

28
Q
This is the leading cause of blindness in people with AIDS and is activated upon immune suppression.
A/ Epstein Barr Virus
B/ Cytomegalovirus
C/ Varicella Zoster VIrus
D/ Herpes Simplex Virus
A

B/ Cytomegalovirus

29
Q

What is the common side effect of Herpes Simplex 1 and 2?

A

HS1 - Cold Sores
HS2 - Genital Warts

Yummy.

30
Q

Gustav was out kissing Greta and is now very sick. His blood tests show an increase of lymphocytes in his system but is not indicative of leukemia. What is wrong with Gustav?

A

Epstein Barr Virus

Mononucleosis (MONO)

It also means Greta is a disease-carrying whore.

31
Q

This causes inflammation and can lead to cervical carcinoma.

A

Human Papillomavirus (HPV)

32
Q

This is a retrovirus (RNA -> DNA) and affects the liver causing chronic inflammation and can lead to cancer.

A

Hep B and C

33
Q

How does Ebola Virus kill its host?

A

Activate blood coagulation that eventually leads to a lack of coagulating factors -> internal bleeding and shock.

34
Q

What is the original of HIV/AIDS?

A

Monkeys

Blood-Blood

35
Q
Among the first patients with HIV/AIDS, what was a common distinguishing factor among those infected?
A/ Increase in Lymphocytes
B/ Decrease in B cells
C/ Increase in B Cells
D/ Decrease in T cells
A

D/ Decrease in T Cells

36
Q

WHat is endocytosis?

A

When a virus is phagocytized into a cell. (Gobbled up).

37
Q

What does Reverse Transcriptase do? Why type of Virus carries it?

A

Converts RNA into DNA and is carried by retrovirus.

38
Q
What does reverse transcriptase do specifically?
A/ Creates ssDNA
B/ Creates dsDNA
C/ Creates ssDNA + ssRNA
D/ None of the above
A

B/ Creates a strand of DNA and then a complementary strand to form dsDNA

39
Q

Explain the process of Retroviral replication within cells.

A

Retrovirus enters cell by dissolving its envelope into the cell membrane of host. Once inside RNA transcriptase converts the ssRNA into a ssDNA and then makes another complementary strand of ssDNA to make dsDNA. Original strand of RNA is dissolved and the dsDNA created enters the nucleus of the cell and combines itself with the original genome (chromosome) of the cell and becomes part of it. As the cell regularly transcribes it DNA, so does the viral DNA, thus creating viral mRNA for transcription of original virus. mRNA will create molecules needed for viral replication (Capsid, RNA transcriptase, etc). Self assembly occurs of new viruses and the cell lyses to release them.

40
Q

Differentiate between Lytic and Lysogenic replication of viruses

A

Lytic - (Impatient) Virus enters the cell with one goal in mind… to replicate itself as fast as possible. Enters the cell and takes over cellular organelles to replicate its genome and structures. Once the cell is overrun with viral molecules, the cell lyses and releases new viral agents to repeat the process with other cells.

Lysogenic - (Wait it out) Virus enters the cell but decides to become part of the cell and attaches its genetic material to the host genetic material and is passed onto daughter cells during cellular replication. When conditions within the cell become undesirable for growth, the viral DNA will detach itself from host DNA and take over the cellular structures to replicate itself (ribosomes, nucleus, etc.). Once the cell is overrun by these structures, the cell will lyse (Like in lytic replication) and release the viral agents out to other cells.

41
Q

What does RNA polymerase do for -ssRNA molecules?

A

Creates a complementary strand of +ssRNA which acts as mRNA to form new viral structures.

42
Q

What does a retrovirus require to multiple within cells?

A

Reverse Transcriptase

Converts RNA strands into usable DNA

43
Q

Compare and contrast the reproduction of cells VS. Viruses

A

Cells reproduce by cellular division

Viruses reproduce by assembling pre-form components inside a host

44
Q

This virus is known as the Lassavirus and causes hemorrhagic fever. What is its strand type?

A

Arenavirus (Arenaviridae)

-ssRNA

45
Q

Coronaviridae is known to cause which illness? What is its strand type?

A

SARS and common cold

+ssRNA

46
Q

Picornaviridae is known to cause what illness? What is its strand type?

A

Polio, Hep A, Common cold

+ssRNA

47
Q

Is West nile virus considered to have a wide or narrow host range? Why or whynot?

A

Wide host range, because it can infect, birds, humans, and mosquitos.

48
Q

What is a Zoonotic Virus?

A

A virus which is primarily transferred among animals; excluding humans. Although humans can become infected as secondary or accidental targets.

49
Q

What are some factors that can affect the host range of a virus?

A
  • Cell surface attachment proteins (Can the virus attach to host?)
  • Availability of replication machinery inside of host cell
  • Ability to leave cell and spread
  • Host anti-viral responses
50
Q

What does DNA polymerase do in the lysogenic cycle of viral replication?

A

Copies the host chromosome which is infected with viral DNA, and transfers it to daughter cells.

51
Q

What are two common sequelae of HIV/AIDS, that are otherwise uncommon among non-infected individuals?

A

Pneumocystis Carinii Pneumonia (PCP)
and
Karposi Sarcoma (KS)

52
Q

Explain how an -ssRNA virus undergoes biosynthesis.

A

-ssRNA cannot act as mRNA in host ribosomes, so RNA-dependent RNA polymerase creates +ssRNA from original strand. the new +ssRNA goes onto make structural proteins for new virions, and also acts as a template for the construction of new -ssRNA for virions. It does this by tricking the host ribosomes into believing that the created +ssRNA are actual mRNA, and the ribosomes transcribe them; create -ssRNA.

53
Q

Explain how an +ssRNA virus undergoes biosynthesis.

A

+ssRNA can be read by host ribosomes, because the host thinks they are mRNA. RNA polymerase moves along +ssRNA strand to create -ssRNA template for the synthesis of new +ssRNA in ribosomes, and go to create structures needed for future virions within the cell. As new +ssRNA are created from their negative templates, the go on to join the newly formed structures in the cytoplasm and create new Virions.

54
Q

Explain how an dsRNA virus undergoes biosynthesis.

A

Viruses uses host machinery to replicate itself. RNA polymerase takes strand of dsDNA and creates mRNA, DNA polymerase takes the other stand and creates a copy of the original ssDNA unit; making multiple copies of the original. The created mRNA leaves the nucleus and in the cytoplasm it creates viral capsids. Once the ssDNA are formed, they go to the cytoplasm and enter capsids and form dsDNA virions.

55
Q

Explain how an +ssRNA Retrovirus undergoes biosynthesis.

A

THEY DO NOT USE HOST RIBOSOMES even though they have the attribute of mRNA (+ssRNA). Trnscription instead occurs in cytoplasm using REVERSE TRANSCRIPTASE. Reverse transcriptase takes ssRNA and makes a DNA strand. DNA strand takes a second pass through Reverse transcriptase and makes a dsDNA from original +ssRNA. the newly created dsDNA travels to nucleus and joins host chromosome and is replicated by cellular division.

56
Q

What does RNA transcriptase do?

A

Proteins that take and original strand and create an RNA copy

(ssDNA -> ssRNA)

57
Q

What does RNA-dependent RNa polymerase do?

A

Enzyme that creates +RNA from a -RNA strand.

-ssRNA -> +ssRNA (mRNA)

58
Q

What is reverse transcriptase?

A

An enzyme that creates DNA from RNA template (Retrovirus)

+ssRNA -> ssDNA + ssDNA = dsDNA