History of Microbiology Flashcards

1
Q

How are microbes essential for life on earth?

A
  • literally grow everywhere
  • first organisms to appear on the planet, evolution includes the evolving of planet earth
  • vast realm of diversity in oceans
  • human body contrains about same amount of microbial cells as human cells
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2
Q

how many microbial cells are there compared to human cells in us

A
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3
Q

what was the first life form on earth

A

marine bacteria

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4
Q

where can microbes exist

A
  • pretty much any env on earth: hot springs, desserts, antarctic glacier, deep sub surface, salt crystal
  • Every mol in nature can be used as a source of carbon or energy by a microorganism osmewhere on this plant

Prokaryotes were the first lifeform on earth, billions of years before the first eukaryote evolved (not surprising that they adapted to all of earth’s environments)

Eukaryotes, by comparison, occupy a very limited range of environments.

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5
Q

what is a Microbe

A
  • living organism requiring a microscope to be seen
  • most consist of a single cell but some are multi
  • range from 0.2 micro meters to a few mm
  • viruses acn be 10x smaller then the smallest cells

*each microbe contains in its genome the capacity to reproduce its own kind

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6
Q
  • Genomes have been sequenced, can know total genetic info of organism (tells how many genes there are and can infer the coding capacity of that organism
  • First sequencing fast enough to seq large genomes developed by fred sanger
  • Todays sequencing generate metagenomes (all the genomes present in a given sample

Can get a large number of sequences to identify organisms present in sample

*Gives the diversity of organisms present

Does not tell us what it looks like, metabolism and how they interact (still need to culture)

**Today’s sequencing efforts generate metagenomes, collections of sequences from diverse populations of microbes taken directly from the environment.

A
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7
Q

what was the first genome to be sequenced

A
  • Haemophilus influenzae

Closed single circular chromosome

Small genome 1.83 Mb encoding 1,749 genes

Obligate pathogen

Small geneome capacity, cant really do independent living

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8
Q

just a note: we study microbes have profoundly affected human demographics migrations, course of wars and cultural practices and economies

A
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9
Q

how have microbes hsaped human history

A
  • effects of microbes were knwon in antiquity before microbes were recognized or known due to effects on:
  • food security, food production (cheese, beer) and preservation, effects on infrastructure a (corrosion on concrete and metals), and human/animal and plant diseases
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10
Q

who is Robert Hooke

A
  • built first compound lens microscope (30x magnification)
  • frist to see and recrod eukaryote microbes
  • observed and drew mold sporangia, mites, nemotodes
  • coined the term cell
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11
Q

who is antonie van leeuwenhoek

A

Son of a cloth draper, experimented with grinding ever-stronger magnifying lenses

500x magnification

Very curious looking at lots of different things and drew them

Called the ‘wiggly things’ he saw animalcules

Discovered they were everywhere

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12
Q

first discoveries of immunology

A

Vaccine immunization is single most important development in prevention of disease

  • Development of immunization: Observed that many people didn’t have the scars from small pox

in middle east they let posules dry, take scab off, grind it and then cut skina nd put on the powder

This would immitate the infection and hopefully introduce small enough dose to cause infection and not kill (hit and miss)

Edward jenner imporved by discovering that people in contact with animals had small chance of getting smallpox

Animals got a form of disease similar to humns, took the scabs on cows and test on young boy (boy became immune)

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13
Q

how was spontanous generation disproved

A
  • poeple assumed If cant observe an organism grow and cant see it assumed it was spontaneous

Ex: if you leave meat exposed to env, you will eventually see maggots (assumed spon arrival)

  • Discovered that the maggots were actually the off spring of flies

(if you sterilize the meat broth and put a cork It would not give rise to maggots (meat was not the source)

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14
Q

who is louis Pasteur

A

Chemist, microbiologist, industraial micrbiologist, immunologist\

Studied chirality of molecules

Discovered fermentation (developed yeast strains for beer industry

As a bacteriologist and immunologist, developed cure of rabies

Developed vaccines for cholera, anthrax and rabies based on weaked/attenuated vaccine strains

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15
Q

how was it discovered that microbes are in ambiet air/surroundings?

A

Exp of lewy pasteur that killed theroy of spon developemnt

Take flask and put in medica, make the swan neck, leave it open to air let stand and did not

If you tip the liquid into curve where the dust has settled then tip it upright it becomes cloudy, shows that microbes are present in material from the air

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16
Q

what is germ theory of disease

A
  • nurse Florence Nightingale is recognized as founder of medical epidemiology

Walked in field hospitals in crimean war, looking at wounds from battle

Marked deaths and causes of deaths (would infection caused the most deaths then any ofther infection)

Needed data to convinced medical establishment to adopt hygenic conditions to counter infections

17
Q

who was robert koch

A

Demonstrated that specific microbe caused specific disease

Did studies in sheep where anthrax is very common

Founder of scientific method

  • developed the pure culture techniqe
18
Q
A

When started looking at cause of disease, took a sample from a person with TB and infecting that in diff animals to see if you could reproduce it in animals

1st, if you compare same sample from healthy and disease animal the diseased one will contain some organism not present in the healthy

*microbe present in all diseased animals

Look at what is present in diseased animal, inject it into the healthy and make sure it gives the same characterisitc of the sik

There has to be an animal host in which you can reproduce the disease ( some only cause diseases in a specific host

Not everything can be cultured (not bac and viruses not in this approach

19
Q
A
20
Q

what are the two things that came from corollary to germ theory

A
  1. the concept of hygiene and disease prevention (antiseptics)
  2. Antibiotics: penecillin (zone of inhibition
21
Q
A
22
Q

how were virus’ discovered

A

Filter eliminated all bacteria

Theorized that there was filterable organism that can cause disease (diff from what they knew then)

-wendell stanlet purified and crystalized the agent & using electron microscopy identified the tobacco mosaic virus

Filterable agent was not a bacterium

Tiny organisms much smaller then bacterium called virus’

23
Q

what is microbial ecology

A
  • russion scietist amoung the first to study microbes natural habitats
  • discoviered lithotrophs
  • developed enrichment cultures
  • built the winogradsky column a model of a wetland ecosystem containing regions of enrichment for microbs utilizing diverse metabolism
  • shows importance of global geochemical cycling of elements
  • the column has a gradient of oxygen and carbon sources
24
Q

what is microbial endosymbiosis

A
  • Endosymbiosis is when an organism lives symbiotically in the cells or in the body of a host organism
  • occurs in plants and animals
  • cellulose digestion in reminants, insects and humans
  • synthesize essentail vitamins and nutrients
  • essential for the proper functioning of animal immune systems

*microbes are found in skin, gut and plant roots

25
Q

how did eukaryotes evolve

A
  • frmo endosymbiosis of prokaryote cells engulfed by eukaryote ancestors
    1. a pre-eukaryote cell evolved infodling of the plasma membrane to generate endoplasmic reticulum and intracellular organelles
    2. 1st endosymbioti event the ancestral cell engulfed a respiring aerobic proteobacteria that evolved into the mitochondira
    3. 2nd endosymbiotic event A eukaryote cell englufed a photosynthetic cyanobacteria that evolved into the chloroplast
26
Q

how was archaea discovered?

A
  • prokaryotes come in 2 evolutionary distinct flavours/lineages
  • carol woese studies bacteria that have adapted to life in extreme environemntal conditions (extreme hot/cold)
  • analysis of 16s ribosomal RNA (rRNA) gene sequences revealed that prokaryotes were a distinct life form
27
Q

what are the different domains in the tree of life

A

comparative sequence analysis of rRNA genes

  • microbes include members of the 3 domaisn of life: bacteria, archaea, eukarya
28
Q

why are microbes so hard to identify?

A
  • massive diversity
  • two main challenges for early taxonomists
    1. Resolution of light microscopy was too low

*challenge to overcome by advances in biochemistry, microscopy and recently genome sequecing

  1. Microbial speicies are hard to identify
    - bacteria from diverse taxonomic groups can have the same cell shape
    - can have 95% similarity in DNA nucelotide seq
    - recent advances in whole genome sequencing and comparative analysis ahve allowed better definitions of microbial species
29
Q

what are the two categorites microorganisms are classified into

A
  • prokaryotes: bacteria and archaea

Eukaryotes: fungi, protozoa, algae

*Eu = with, Pro = without

karyote = nut or kernel = nucelues

30
Q

How are prokaryotes named?

A
  1. Genus: Escherichia
  2. Species: c**oli

written Escherichia coli (italics)

OR

Escherichia coli (underline, not italicized)

can abbreviate by shortening genus name: (E. coli)