High-yield microbio Flashcards
toxin that inhibits protein synthesis
shiga
the worst malaria
plasmodium falciparum which forms sticky knobs that cause clots–>organ failure, dic
clindamycin class, mechanism, allergies, general coverage
lincosamide
50s protein synthesis inhibitor
no major allergies (QTc, GI side fx)
pretty broad
ceftaroline mechanism, allergies, general coverage
4th gen ceph
less likely to cause allergy than penicillins
many gram negatives, MRSA!
abx vs mrsa
severe/iv: vancomycin +/- pipercillin-tazobactam, daptomycin
oral: ceftaroline, doxycycline, linezolid, clindamycin, Septra (trimethoprim-sulfamethoxozole)
effects of ehec
hemolytic uremic syndrome: too much hemolysis overwhelms kidneys, can’t keep up. less severe inhibits protein synthesis in rbcs (b/c of shiga toxin) resulting in capillary leakage, bloody diarrhea
yeast vs mold repro
yeast = budding
mold = conidiation (spore production)
both asexual
examples of yeasts
candida (by far most common), cryptococcus, pneumocystic
bacteria causing guillan barre
campylobacter
what is hiv care cascade
describes how many patients are dx’ed vs in care vs retained vs virally suppressed. 88% dx, 81% of those linked to care in 1st month. 50% retained in care, slightly more than that suppressed. need care w/in 1 mo of dx.
rheumatic fever bacterium
salmonella typhii
toxin that opens chloride channels
cholera
transmitted by fecal-oral
shigella, cholera, salmonella typhii
Vancomycin mechanism, allergies, general coverage
glycopeptide cell wall inhibitor
infusion reaction
MRSA, c. diff when po
examples of dimorphic fungi
histoplasmosis, blastomyces, coccioides; hyphae at rt unicellular at 37c
food-borne
campylobacter, EHEC, non-typhoid salmonella
yeasts vs molds structure
yeast = unicellular, round, may form pseudohyphae (daughter buds remain attached and form chains) molds = multicellular, hyphae
linezolid class, mechanism, allergies, general coverage
oxazolidinone
70s formation protein synthesis inhibitor
no major allergies (serotonin syndrome, optic neuritis, bone marrow, among other side fx)
broad, MRSA
abx vs gram negatives
cephalosporins, fluoroquinolones, Septra
tx hiv
an anchor drug (usually INSTI = integrase inhibitor) and 2 NRTIs (nucleotide reverse transcriptase inhibitors)
types of enteroinvasive bacteria
campylobacter, shigella, salmonella typhii, non-typhoid salmonella
viral diarrhea causes
norovirus, rotavirus
daptomycin mechanism, allergies, general coverage
puts holes in cell membrane
no allergies (skeletal myopathy among other adverse fx)
MRSA, many gram negatives but not pneumonia (inactivated by surfactant)
fluoroquinolones suffix, mechanism, allergies, general coverage
-floxacin
dna gyrase inhibitor
no major allergies
broad, includes gram negatives
hiv complications
aids: opportunistic infections, opportunistic cancers, chronic inflammation (but not clearance) = accelerated aging process, cardiovascular disease, clotting, immune senescence
oxacillin mechanism, allergies, general coverage
beta lactam
anaphylaxis
antistaph
what has t3ss and what does it do
salmonella typhii, non-typhoid salmonella, cholera, injects virulence factors
dx hiv
earliest possible to latest:
viral pcr, viral antigen, antibody (3rd, 2nd, 1st gen)
abx vs mssa
antistaph penicillins = naficillin, oxacillin, amox+clav
1st thru 4th gen cephs
gram negative bacteria of gut
“entero-“, e. coli, kleibsella, proteus
malaria with hypnozoite
vivax, ovale; “hypnozoite” means a months to years long dormant phase
penicillins mechanism, allergies, general coverage
beta lactam (tpa inhibitor)
anaphylaxis
narrow (penicillin), antistaph (naf, oxa), broad (amox/clav)
gram positives mostly, mssa, mrsa when in combo with other drugs
honey crusted epidermal infection
impetigo
steps of hiv infection
gp41+120 binding to cd4+ccr5/cxcr4 –> fusion with cd4 cell –> rt –> integrase incorporates into host genome –> production of viral proteins –> protease cleaves these to make viral capsid
cephazolin mechanism, allergies, general coverage
1st gen ceph
less likely to cause allergy than penicillins
a few gram negatives, mssa
fungi therapeutic targets
ergosterol synthesis (cell membrane); beta-1,3-glucan synthetase (cell wall); dna/rna synthesis
don’t start hiv tx asap if….
cerebral involvement or other closed spaces, rebound inflammation can result in high icp, possible death. almost always start asap tho
commensal anaerobic bacteria of gut
bacteroides fragilis
preferred hiv anchor drug
INSTI (integrase inhibitors) (fewest side effects)
yeast vs mold commensal?
yeast commensal, mold no but ubiquitous in environment
abcess bacterium
strep or staph
drug targets hiv
surface proteins, rt, integrase, protease
metronidazole mechanism, allergies, general coverage
dna breakage
no major allergies but several unpleasant side fx
broad, includes anaerobes, yeasts, gram negatives, c. diff
doxycycline class, mechanism, allergies, general coverage
tetracycline
30s protein synthesis inhibitor
no major allergies (photosensitivity, pill esophagitis)
pretty broad, includes MRSA, some + and -, some parasites, strep pneumonia
beta lactam vs mrsa
5th gen ceph, ceftaroline
nafcillin mechanism, allergies, general coverage
beta lactam
anaphylaxis
antistaph
impetigo bacterium
strep
examples of molds
aspergillus, mucorales (highly invasive, e.g. bread molds) e.g rhizopus
cefoxitin mechanism, allergies, general coverage
2nd gen cef
less likely to cause allergy than penicillins
a few more gram negatives, mssa
persistent (14-30 days) diarrhea causes
parasites
necrotizing fasciitis bacterium
strep
cellulitis bacterium
strep or staph
what are surface proteins of hiv and what do they bind
gp41, gp120 –> cd4, ccr5, cxcr4
malaria that causes hemolytic anemia
falciparum, vivax
target protein of beta-lactams
transpeptidase (tpa)
trimethoprim-sulfamethoxazole mechanism, allergies, general coverage
folate synthesis inhibitor
many adverse events including sjs/ten, aplastic anemia
very broad, includes gram negatives, MRSA
types of malaria
falciparum, vivax, ovale, malariae, knowlesi
types of noninvasive bacteria
ehec, cholera, c diff
dicloxacillin mechanism, allergies, general coverage
beta lactam
anaphylaxis
antistaph
good for anaerobes
metronidazole, moxifloxacin, amox/clav, pip/tazo, carbanepams
primary virulence factor of gram negatives
lps
ceftriaxone mechanism, allergies, general coverage
3rd gen ceph
less likely to cause allergy than penicillins
even more gram negatives, mssa
acid stable bacterium, can cause infection with <10 cells
shigella
abx vs gram positives
beta lactams,