Genetics & Metabolics Flashcards
Trisomy 13 genetics
- patau syndrome
- trisomy caused by maternal neurotic nondisjunction
- risk increases with maternal age
- can be suspected on prenatal screening
- confirmatory diagnosis with karyotype
Trisomy 13 features
- facial: sloping forehead, eye abnormalities (small eyes, close together eyes, iris colobomas), low set abnormal ears, small jaw
- cleft lip and palate
- cutis aplasia congenita (helps distinguish from T18)
- midline defects
- central apnea high risk
- heart: VSD, ASD, ToF
- renal problems - multi cystic, horshshoe
- often die within 2 weeks of birth (cardio respiratory) (10% survive beyond 1yr)
Trisomy 13 health surveillance
If they survive beyond neonatal period
- echo
- kidney ultrasound
- brain MR
- sleep study for central apnea
- monitor growth on T13 curve
- feeding assessments
- regular eye checks by optho
- development and intellectual delays common (most remain non verbal)
Rett Syndrome
X linked
Hand wringing
Autistic behaviour
Female
Should be investigated for differential genetic cause of ASD or severe ID in female
MECP2 molecular testing for dx
Sturge Weber
Mosaic somatic mutations
Port wine birthmark +/- brain involvement +/- glaucoma
Brain MR to diagnose
Optho consult for glaucoma
Overlap with Klippel-Trenaunay syndrome (mixed capillary/venous/lymphatic malformations involving bone and muscle in one limb)
Can have seizures, development problems, stroke-like episodes, headaches
Lesch Nyhan Syndrome
Classic: kidney stones, gout, self-injurious behaviour, GDD, dystonia
X-linked recessive (boys)
If gout, think purine metabolism disorder (decreased enzyme or overproduction)
Allopurinol for gout treatment
Diagnose with HPRT enzyme analysis, high serum uric acid, high urine uric:Cr
Cervical spine xrays in Down syndrome
onlyif symptoms:
Any child with neck pain, radicular pain, weakness, spasticity, changes in gait, hyper-reflexia, change in bowel/bladder or signs of myelopathy warrant plain cervical spine xrays in neutral position.
clinical manifestations of A1AT
Lung disease (ex bronchiectasis, emphysema) :(occurs with severe genotype)
PFT: reduced expiratory air flow, hyperinflation, low diffusion capacity
Liver disease (hepatoma, cirrhosis):
Prolonged neonatal jaundice
Cholestasis symptoms
Mildly elevated liver enzymes
Can develop portal hypertension
Skin & soft tissue:
Panniculitis (rare but classic, can occur with all genotypes)
Cellulitis like areas or tender red nodules on trunk or proximal extremities
Nodules tend to ulcerate spontaneously and discharge oily yellow fluid
Persistent cutaneous vasculitis
Cold urticaria
Acquired angioedema
PFT finding to suggest A1AT
Anyone with fixed airflow obstruction on spirometry should be screened for A1AT
Male with ambiguous genitalia, edema and proteinuria
Denys Drash syndrome
Cafe au lait macules and axillary freckling
Neurofibromatosis
Neurofibromatosis type 1
-Cafe au lait macules 6+ (most on trunk and extremities)
-Axillary or inguinal freckling
-Iris lisch nodules 2+ (identified on slit lamp - need optho assessment)
-Neurofibromas 2+
-Bone abnormalities (Osteopenia, Scoliosis, Long bone dysplasia)
-Optic gliomas (optho!!) - can extend to hypothalamus and cause precocious puberty
autosomal dominant
Wilm’s tumor + ambiguous genitalia
denys drash
abdo distension, hematuria, fevers, anorexia, pallor, weight loss
wilms tumor
Wilm’s, absent iris, undescended testes, GDD
WAGR syndrome
Wilms
Aniridia: absent colored region of eye
GU abnormalities: undescended testes, hypospadias, internal genital/urinary anomalies
Retardation
Frasier syndrome
congenital nephropathy, ambiguous genitalia in males, underdeveloped gonads that may lead to cancer. Early ESRD in childhood
ADHD, ataxia, intellectual dissability and adrenal insufficiency
x linked adrenoleukodystrophy
progressive weakness, intellectual impairment, hypertrophy of calves
ducehenne muscular dystrophy
x linked recessive
cerebellar ataxia, oculomotor apraxia, choreoathetosis, telangiectasia, immunodeficiency
ataxia telangectasia
autosomal recessive
symptom onset before age 5
E.coli sepsis related to metabolic condition
galactossemia
Wilms Tumor Genetic Syndromes
WT1 mutation
- denys drash
- fraser syndrome
- WAGR
Bottom line: WT1 mutation = Wilms Tumor, Kidney disease, abnormal genitals
Beckwith Wiedemann also has wilms tumor association
Dent disease
proteinuria & nephrolithiasis
X-linked
nephrolithiasis
low molecular weight proteinuria,
hypercalciuria
Fanconi Syndrome (proximal tubule defect- glycosuria, amino aciduria, phosphaturia)
Consanguinity common gene inheritance
think autosommal recessive
Smith Lemli Opitz Syndrome
Autosomal recessive (think consanguinity)
Mutation in 7-dehydroxycholesterol-delta7 reductase- the final step in cholesterol synthesis.
Have low cholesterol and buildup of cholesterol precursors and many congenital anomalies
Type 1 (classic): Prenatal and postnatal growth retardation, microcephaly, ptosis, anteverted nares, syndactyly of 2nd and 3rd toes, and severe cognitive impairment. 70% are males- genotypic makes have ambiguous genitalia or complete sex reversal with female genitalia. Associated with pyloric stenosis
Type 2: acrodysgenital syndrome- lethal within 1 yr, severe malformations, postaxial polydactyly, extremely abnormal external genitalia. Cleft Palate have been seen in Type II
Rx= dietary cholesterol (egg yolks lol) and HMGCoA reductase inhibitors to prevent precursor buildup
Turner syndrome heart
left sided heart problems
- bicuspid AV
- aorta things
Achondroplasia
Autosomal Dominant- FGFR3 mutation
The most common short-stature skeletal dysplasia marked by rhizomelia (disproportionate length of proximal limb), macrocephaly, midface hypoplasia, and normal cognition
Can get spinal stenosis and small foramen magnum
Growth hormone NOT effective
VACTERL investigations
CXR (butterfly vertebrae)
abdo US (kidney problems
no genetic testing
VACTERL Association
V- Vertebral anomalies- CXR (spine xray)- butterfly vertebrae
A- anal atresia/anorectal anomalies- examine
C- Cardiac
TE- TEF
R- enal- ultrasound
L- limb
Gilbert syndrome
A familial, nonhemolytic, unconjugated hyperbilirubinemia
Most common hereditary hyperbilirubinemia syndrome (5-10% white ppl)
Autosomal recessive
Defect in promoter region for UDPGT-1 (enzyme that makes bilirubin water soluble)- making it only partially effective
Unlike Crigler Nijjar (also defect in UDPGT)- it often presents after puberty and not associated with chronic liver disease.
Mild, fluctuating levels of bili. No treatment. Only really important in some chemotherapies because this enzyme breaks it down
What test for Beckwith Wiedemann
DNA Methylation test
Tests requiring DNA methylation test
Uniparental disomy syndromes
Beckwith Wiedemann
Prader Willi
Angelman
Loss of methylation on mom
Beckwith Wiedemann
big tongue
keep eating
organomeagly
Neonate with persistent hypoglycemia, seizure and absent septum pellucidum
Septo optic dysplasia
- midline brain defects (think absent corpus callosum or septum pellucidum)
- can get panhypopit (and pituitary hormone issues)
Septo-optic dysplasia
Also called “optic nerve dysplasia syndrome”
Classic “triad” or any combo of:
Optic nerve hypoplasia (nystagmus, visual impairment)
Pituitary gland hypoplasia (75%, most common is GH deficiency)
Midline brain defects (absent corpus collosum, corpus collosum dysgenesis)
can have seizures
Causes: genetic (unknown), cocaine in pregnancy, other environmental
Isolated polydactyly
pretty normal. can remove the digit
Typically autosomal dominant in inheritance
If isolated, especially with family history, no other workup
Treatment is ablation of digit (Suture ligation or surgical depending on how formed)
Ash leaf spots
hypopigmented lesions
can be seen with Wood’s lamp (blue light)
tuberous sclerosis
- tubors in brain
autosomal dominant with variable expressivity
McCune Albright
Triad of- precocious puberty (peripheral), polyostotic disease (fibrous dysplasia), abnormal pigmentation with irregular borders
Autonomous hyperfunctioning of 1 or more gland (pituitary, thyroid, and adrenal glands). GNAS mutation which stimulates cAMP and activates receptors including those for ACTH, TSH, FSH, LH). In short, get lots of endocrinopathies (hyperthyroid, cushings, etc)
neurocutaneous disorders
Neurofibromatosis 1/ 2
Fanconi Anemia
Russell Silver Syndrome (Cutis aplasia, cardiac stuff)
Noonan Syndrome
Bloom Syndrome
Tuberous Sclerosis (usually hyPOpigmented)
McCune Albright
Sturge Webber
Males only transmission
x linked recessive
Mccune Albright
bone problems (Polyostotic Fibrous Dysplasia)
large cafe au lait macules
endocrine problems - precocious puberty
hypoketotic hypoglycemia
fatty acid oxidation disorder (acidosis)
hyperinsulinism (no acidosis; insulin inhibits ketosis)
Anions minus cations
Na - (HCO3 + Cl) = AG
**Sometimes sources say (Na+K)- (HCO3+Cl)
Wide Anion Gap >12 (+/-2) = Acid Gain
Causes of wide anion gap metabolic acidosis = MUDPILES
A newborn baby is found to have choanal atresia.
CHARGE syndrome
(coloboma, heart defects, atresia choanae (also known as choanal atresia), growth retardation, genital abnormalities, and ear abnormalities)
CHARGE syndrome
- Coloboma
- Heart defects (commonly TOF)
- Atresia of the choanae
- Retardation of growth & development
- GU anomalies
- Ear anomalies (ear abnormalities, SNHL)
Other:
asymmetric facial nerve palsy, cleft lip/palate, EA/TEF
usually sporadic mutation
single gene testing - SHD 7
Trisomy 21 surveillance
Birth
- echo before 1 mo age
- TSH as newborn
- cbc within 1 week
Annual
Hearing screen
CBC
TSH
Optho q 2 years
Celiac only if symptomatic
cervical spine screen if symptomatic
sleep study by age 4
Carnitine-acylcarnitine translocase deficiency
Fatty acid oxidation disorder
- avoid prolonged fasting
Beckwith Wiedemann associated cancers
Associated health conditions:
Embryonal cancer (until at least age 8):
- Wilm’s tumour
- Hepatoblastoma
- Neuroblastoma
- Rhabdomyosarcoma
Screening:
AFP (for hepatoblastoma) & abdo US q3mo until 4yo
Then renal US including adrenal glands q3mo until 8yo (then less frequently)
Periodic CXR and urine HVA/VMA (for neuroblastoma) have been suggested but low yield so not in most screening protocols
DNA methylation testing (MS-MLPA)
Beckwith Wiedemann symptoms
Pits and creases (ears)
Macrosomia, macroglossia
Hypoglycemia (neonatal) - pancreatic beta cell hypertrophy
Facial nevus simplex and other vascular malformations
Asymmetric growth, hemihypertrophy
Characteristic facies: midface hypoplasia and infraorbital creases
Omphalocele, umbilical hernia
Premature and overgrown at birth
Organomegaly
Enlarged adrenal cortex
Cardiomegaly or structural cardiac anomalies
Renal abnormalities: nephromegaly, nephrocalcinosis, etc.
Advanced bone age
Prader Willi Symptoms
In Infancy:
Poor suck
Need tube feeding
Poor growth/FTT
Central hypotonia
Childhood: 4Hs and an O
Hypotonia
Hypogonadism
Hypomential/devel delay
Hyperphagia
Obesity (truncal)
Other physical features: almond shaped eyes, thin upper lip, small hands/feet
DNA methylation studies
growth hormone helps in Prader Willi
Digeorge syndrome testing
FISH for 22q11
or microarray
test PTH and calcium
immune workup (T and B cells, immunoglobulins, vaccine titers)
renal US for anomalies
Williams syndrome testing
FISH for 7q
think if HYPERcalcemia
CATCH 22
Digeorge:
CHD: VSD, TOF, interrupted aortic arch
Abdomal facies
thymic hypoplasia
cleft palate
hypocalcemia
22q11 deletion syndrome
Baby has tetrology of fallot - what genetic disorder do you test for
DiGeorge (22q11 deletion)
congenital central hypoventilation syndrome
primary central apnea, hypercarbia, and hypoxemia.
presents within first several weeks of life
associated with risk of Hirschsprung and neuroblastoma
they should have holter every 12 mo - risk of sinus pauses (may need pacemaker)
PHOX2B
Noonan Syndrome symptoms
hypertelorism, big forehead, webbed neck
MSK: pectus, wide nipples
CHD: right sided lesions (PS), cardiomyopathy
Cryptorchidism
Hypotonia
Failure to thrive
Abnormal bleeding and bruising
multi gene testing panel
similar to Turner’s but hypertrophic cardiomyopathy for heart lesion and has cryptorchidism
Smith Lemli Opitz
microcephalic
cleft palate
syndactylyl 2nd and 3rd toes
low cholesterol problem (think opposite of familial hypercholesterol)
Myotonic muscular dystrophy
Affects all muscles
- hypotonia at birth
- inverted v of upper lip
- shitty muscles everywhere - look thin, muscle wasted
- reflexes preserved (different from Duchenne late illness)
- CK not as high as other muscular dystrophies
Autosomal dominant
PCR testing
2year-old boy with hypoglycemia, triangular faces with 4 café au lait macules. Ht 3rd, wt 3rd, HC 50th.
Russel Silver
Russel Silver syndrome
Small for gestational age (asymmetric SGA)
FTT
Relative macrocephaly, triangular face, fifth finger clinodactyly
Feeding difficulties
Micrognathia with narrow chin
Hypoglycemia
Cafe au lait macules
Testing: DNA methylation studies
Russell Silver acute illness
measure ketones and blood sugar - risk of ketotic hypoglycemia when ill
Cafe au lait ddx
NF1
Legius syndrome (SPRED1): no neurofibromas or lisch nodules
NF2: vestibular schwannoma
Noonan: congenital cardiac defects, dysmorphisms
Constitutional mismatch repair genes mutations: GI cancers
Russell-Silver syndrome: Small for gestational age
McCune-Albright syndrome: endocrinopathies, fibrous dysplasias
Fanconi anemia: hematologic abnormalities, multiple congenital abn
2 year old boy 3 days of vomiting and diarrhea. Lethargic. Glucose low (2.4?). Ketones 2+. Most likely diagnosis?
hyperketotic hypoglycemia
Adrenocorticoleukodystrophy
think if:
- tanned (signs of addison disease)
- ADHD symptoms
- ataxic
LCFAD
x linked
affects the brain and adrenals (Addison like picture)
Dx:
- check long chain FA to confirm diagnosis
- brain MR after diagnosis
- cortisol w/u after diagnosis
ELFIN FACIES
Williams syndrome
supravalvular AS and coarctation
hypercalcemia
stelatte iris
Beckwith Wiedemann tumor association
Hepatoblastoma highest risk - check AFP every few months
Neonate with severe hypotonia and requiring gavage feeding. often puffy feet and hands
Prader Willi
Timing for achondroplasia neuroimaging sreening
by 1 month of age, MR brain
What test is warranted for kids with new developmental delay?
chromosomal microarray
3 week old . PH 7.1. High ammonia, high lactate. Etiology?
organic acidemia
(ex. methylmalonic acidemia)
If cafe au lait spots, refer to?
optho for optic glioma and Lisch nodules (need slit lamp to help with diagnosis
Turner syndrome features
XO
sporadic inheritance (can have mosaicism)
Classic things:
- webbed neck
- broad chest, wide spaced nipples
- low birth weight
- short stature
- wide carrying angle
- low hairline