Genetics Flashcards
Southern Analysis
DNA probe to digested DNA
SNOW DROP
Northern Analysis
DNA probe to digested RNA
SNOW DROP
Western Analysis
Antibody probe to protein of interest
SNOW DROP
Excised out to make mature RNA
Intron (Exon stays)
Affected father transmits carrier state to all of his daughters
X-linked recesive
Disease 2x more common in females than males
X-linked dominant
Affected father transmits disease to all of his daughters
X-linked dominant
Affected mother has 50% chance passing disease to sons or daughters
X-linked dominant
Which has higher recurrence risk? Syndrome or association
Association
Increased risk with advanced paternal age
Achondroplasia OI Thanatrophic dysplasia Apert syndrome Crouzon syndrome NF Klienefleter and T21 slight increase
Arachnodactyly
(Long, spider like fingers)
Homocystinuria, Marfan syndrome
Camptodactyly
(Flexed digits, usually proximal 5th finger )
Trisomy 8 or isolated
Cystic hygroma
Noonan syndrome & turner
Also deletion 13q, 13, 18, 21
Hypotelorism
Holoprosencephaly
Meckel-Gruber
Williams
Trisomy 13
Limb hypertrophy
BWS, Klippel Trenauney Weber syndrome
Lips, thick and or prominent
Trisomy 8
WAGR sx
Williams sx
Hypogenitalia
Carpenter
Klinefelter
Prader Willi
Smith Lemli Opitz
Macroglossia
BWS
Congenital hypothyroidism
T21
Radial hypoplasia
Fanconi TAR (T for Thumbs always present) VACTERL Holt Oram Cornelia de Lange Poland Sequence T13 and 18
Prominent cupped ears
Trisomy 8
Cutis aplasia
T13
overlapping of 2nd finger over 3rd and 5th over 4th
T18
MC heart defect in T21
Endocardial cushion defect
Hypoplastic middle phalanx in 5th digit
T21
Brushfield spots
T21
speckled iris
cat like cry
Cri du chat (5p deletion)
Greek warrior helmet
Wolf Hirschhorn (4p deletion)
Widely spaced teeth, large mouth
Angelman
Inappropriate bursts of laughter
Angelman
CATCH 22
Cardiac Abnormal facies Thymic hypoplasia Cleft palate Hypoclacemia
Heart defect in 22q11.2 deletion
Aortic arch abnormalities
R sided aortic arch, IAA, truncus
Broad thumbs and first toes
Rubenstein Taybi syndrome (16p13.3) Apert syndrome (AD)
Heart defect in Wiliams syndrome
SupraValVular sub aortic stenosis > PPS
stellate iris pattern
Williams sx
Trident hands
Achondroplasia
MC cardiac defect in Noonan syndrome
dysplastic pulmonary valve
ASD, CM
Absent, hypoplastic or abnormally shaped thumbs
Holt Oram syndrome
Fanconi
VACTERL
Lens subluxation
Marfan (Upward)
Homocystinuria (Downward)
Wormian bones
OI
Menke’s disease
Cloverleaf skull
Thanatorphic dysplasia
Mandibular and malar hypoplasia
Treacher Collins (TCOF1 gene, chromosome 5)
Telephone receiver femurs
Thanatorphic dysplasia
Lateral displacement of medial canthi
Waardenburg syndrome type 1 (PAX 3 gene)
White forelock, partial albinism
Waardenburg syndrome
Lateral displacement of inner canthus
Carpenter syndrome (AR)
Short distal extremities
Ellis van crevald
Occipital encephalocele
Meckel Gruber
2nd and 3rd toe syndactyly
Smith Lemli Opitz
Cornelia de Lange
Ulnar abnormalities
TAR syndrome
Large testes
Fragile X
Large ears
Fragile X
Abnormality of copper transport
Menkes disease
MC cardiac lesion in Klinefelter
MVP, tetralogy of Fallot, ASD, PDA
Disproportionately long arms and legs
Klinefelter syndrome
Marfan syndrome
MC cardiac lesion in Turner
Bicuspid aortic valve, Coarctation
Horseshoe kidney
Turner syndrome
CHARGE syndrome
Coloboma Heart disease Atresia of CHoanae Retarded growth and development Genital hypoplasia Ear Major criteria are: coloboma, Atresia, Ear and CN abnormalities
Coloboma
CHARGE Cat eye syndrome Deletion 13q Treacher collins Trisomy 13
Large placenta with hydatiform changes
Triploidy
Synophrys
(Eyebrows joined in middle)
Cornelia de Lange
Long and curly eyelashes
Cornelia de Lange
Hirsutism
Cornelia de Lange
Micrognathia, glossoptosis, cleft palate
Pierre Robin sequence
Limited movement of head
Klippel Feil sequence
Unilateral hypoplasia or absence of pectorals muscle
Poland sequence
Small triangular facies
Russel silver syndrome
5p deletion
Cri du chat syndrome
4p deletion
Wolf Hisrschorn syndrome
Maternal 15q 11-13 deletion
Angelman syndrome
Paternal 15q 11-13 deletion
Prader Willi syndrome
deletion of elastin gene
Williams syndrome
FGFR3 gene
Achondroplasia (AD), Hypochondroplasia Thanatophoric dysplasia (AD)- all secondary to new mutations
FGFR2 gene
Apert syndrome (AD) Crouzon syndrome (AD)
CKN1C imprinting center
BWS (AD)
Fibrillin gene
Marfan syndrome (AD)
12q22
Noonan syndrome (AD)
Defect in type 1 collagen (COL1A)
OI
Defect in type 2 collagen (COL2A)
Stickler syndrome
Achondrogenesis type II
OI type 2
TCOF 1 gene
Treacher collins syndrome
Chromosome 5
PAX 3 gene
Waardenburg syndrome (AD)
Micropthalmia gene
Waardenburg syndrome (AD)
CGG repeats
Fragile X
47XXY
Klinefelter
Quadruplicate or triplicate at 22q11
Cat eye syndrome (vs Digeorge is deletion)
NIPBL gene
Cornelia de Lange (AD)
SMC1L1 gene
Cornelia de Lange (X-linked, milder)
Maternal uniparental disomy of chromosome 7
Russel Silver
Imperforate anus , dysplastic ears, thumb anomalies
Townes Brocks syndrome
SOX 9 mutation
Campomelic dysplasia
IFT gene mutation
Jeune asphyxiating thoracic dysplasia (AR)
Mutation in CHD7
CHARGE syndrome
Chromodomai helices DNA-binding protein 7
RNA polymerase binds to
Promoter (upstream of start site, close to the gene)
Enzyme responsible for transcription
RNA polymerase
DNA –> mRNA
Enzyme responsible for DNA replication
DNA polymerase
Cafe au lait spots
NF (smooth, coast of California) McCune Albright (jagged, coast of Maine) Legius syndrome LEOPARD sx TS Silver Russel syndrome
MC CHD with Holt Oram
ASD
MC CHD with Cornelia de Lange
VSD > TOF