general Flashcards
Gram + - subgroups
- cocci
- Robs (bacilli)
- branching filaments
gram + branching filaments - bugs (and characteristics)
- Actinomyces - anaerobe, not acid fast
2. Nocardia - aerobe, acid fast
gram + robs - bugs (and characteristics)
- Clostiridium - spore forming, anaerobe
- Bacillus - spore forming, aerobe
- Listeria - no spore forming, tumbling motile, aerobe
- corynobacterium - no spore forming, non-motile,
gram + cocci are divided to (and characteristics)
- staphylococcus (cat+, clusters)
2. streptococcus (cat-, chains)
staphylococcus - bugs
ALL CAT+, CLUSTERS
- S. aureus
- S. epidermidis
- S. saprophyticus
streptococci are divided into subgroups according to (and the meaning)
hemolysis
- partially hemolysis (α)
- complete hemolysis (clear) (β)
- no hemolysis (γ)
β hemolytic streptococci - bugs and groups
- S pyogens (group A)
2. S. agalactiae (group B)
γ hemolytic streptococci - bugs and groups
- enterococcus (E. faecalis, E. feacium) - Group D,
2. Nonenterococcus (Streptococcus bovis)
α hemolytic streptococci - bugs (and characteristics)
- S. pneumoniae
2. Viridaans streptococci (eg. S. mutans, S. sanguinis, S. mitis)
S. pneumoniae - clinical manifestation
A. MCC OF: 1. Meningitis 2. Otitis media (in children)
3. Pneumonia 4. Sinusitis
B. Sepsis in sickle cell and splenectomy
Enterococci can cause
I. UTI
2. biliary tract infection
3. sabacute endocarditis
(following GI/GU procedures)
actinomyces vs Nocardia according to clinical manifestations
Acinomyces –> oral/facial abscess that drain through sinus tracts, PID with intrauterine device
Nocardia –> pulmonary infections in immunocompromised and cutaneous infection after trauma in immunocompoment
actinomyces vs Nocardia according to treatment
MNEMONIC: SNAP –> Sulfa - Nocardia / Actinom - Penicillin
Acinomyces –> penicillin
Nocardia –> sulfonamides
Gram (-) - subgroups
- diplococci
- coccoid robs (cocciobacilly)
- robs
- oxidase (+) comma shaped robs
Gram (-) - subgroups - diplococci - bugs
- Neisseria meningitis
- Neisseria gonorrhoeae
- Moraxella catarrhalis
Gram (-) - subgroups - coccoid robs - bugs?
- haemophilus infleunzae
- Pasteurella
- Brucella
- Bordetella pertusis
- Francicella tularencis
Gram (-) - subgroups - oxidase +, comma shape
- Campylobacter jejuni (grows in 42c, oxidase +, comma shape)
- Vibrio cholera (grows in alkaline media, oxidase +, comma shape)
- Helicobacter pylori (produces urease, oxidase +, comma shape, catalase +)
Gram (-) stain robs are divided to (only the groups)
- Lactose fermeter
2. Lactose nonfermenter
Gram (-) stain robs Lactose nonfermenter bugs
- Salmonela
- Proteus
- Yersinia
- Shigella
- pseudomonas
Gram (-) stain robs - lactose fermenter bugs
- klebsiella
- E. coil
- Enterobacter
- citrobacter
- others
neisseria gonococci vs neisseria meningitis - prevention
neisseria gonococci –> condoms (for STD), erythromycin ointment (neonatal transmision)
neisseria meningitis –> Rifampin, ciprofloxacin or ceftriaxone prophylaxis in close contacts
neisseria gonococci vs neisseria meningitis - treatment
neisseria gonococci –> ceftriaxone + (azithromycin or doxycycline) for possible chlamydial coinfection
neisseria meningitis –> ceftraxone or penicillin G
ciprofloxacini used for
cystitis and pyelonephritis
Fluoroquinolones - diverticulitis and GI infections
- moxifloxacin alone (it cover anaerobes)
2. ciprofloxacin, gemifloxacin and levofloxacin must be combined with metronidazole because they dont covers anaerobles
Fluoroquinolone that covers anaerobes
moxifloxacin
Anaerobes - drugs
oral (above the diaphragm):
1. penicillin G or VK, ampicillin or amoxicillin
2. clindamycin
Abdominal / GI
1. metronidazole
2. beta lactam/lactamase combination
PIPERACILLIN, CARBAPENE,S AND 2ND GENERATION CEPH ALSO COVER ANAEROBES
Gram (-) bacilli are covered by
- quinolones
- aminoglycosides
- carbepens
- peperacillin, ticarcillin
- aztreonam
- cephalosporins
common cause of meningitis in newborn (0-6months) (in order)
- Group B streptococci
- E. coli
- Listeria
common cause of meningitis in children (6months-6yr) (in order)
- S. pneumoniae
- N. meningitis
- H. influenzae type B
- Enteroviruses
common cause of meningitis in 6-60 years (in order)
- S. pneumoniae
- N. meningitis (1st in teens)
- Enteroviruses
- HSV
common cause of meningitis in 60+ (in order)
- S. pneumoniae
- Gram - robs
- Listeria
common cause of pneumonia in neonates (less than 4 weeks)
- S. agalactiae
2. E. coli
common cause of pneumonia in children (4wks - 18yr) (in order)
- viruses (RSV)
- mycoplasma
- C. trachomatis (infants - 3 years)
- C. pneumoniae (school-aged children)
S. pneumoniae
common cause of pneumonia in adults (18-40yr) (in order)
- mycoplasma
- C. pneumoniae
- S. pneumoniae
- viruses (eg. influenza)
common cause of pneumonia in adults (40-65yr) (in order)
- S. pneumoniae
- H. infuenzae
- Anaerobes
- viruses
5, Mycoplasma
common cause of pneumonia in elderly (in order)
- S. pneumoniae
- Influenza virus
- Anaerobes
- H Influenzae
- Gram (-) robs
CATALASE + organism - examples
PLACESS (+ nocardia, H. pylori, B. cepacia
- Staphylococci 2. E-coli 3. Candida
- Serratia 5. Listeria 6. Aspergillus
- Pseudomonas 8. Nocardia
staphylococcus aureus can cause …. (categories and manifestations
A. inflammatory disea: 1. skin infection 2. organ abscesses
3. pneumonia 4. endocarditis 5. osteomyelitis
B. Toxin mediated disease: 1. TSST-1 –> Toxic shock syndrome 2. Exfoliative –> scalded skin syndrome
3. enterotoxin –> rapid onset food poisoning
C. MRSA infection: serious nosocomial and community-acquired infections
Toxic shock syndrome - is associated with (situations)
- S. aureus –> vaginal tampons, nasal packing
2. S. pyogenes –> painful skin infection
diptheria - symptoms
- pseudomembranous pharyngitis (grayish-white membrane)
- Lymphadenopathy (bull neck)
- myocaridits
- arrhythmia
- demyelination/paralysis of peripheral nerves
spore forming bacteria - bugs and diseases
- Bacillus antrhacis –> antrax
- Bacillus cereus –> Food poisoning
- Clostiridium botulinum –> botulism
- Clostiridium difficile –> Antibiotic associated colitis
- Clostiridium perfingess –> gas gangrene, food poisoning
- Clostiridium tetani –> tetanus
- Coxiella burnetii –> Q fever
Clostiridia - toxins
- Clostiridium tetani –> tetanospasmin
- Clostiridium botulinum –> Botulinum toxin
- Clostiridium perfringens –> Alpha toxin, head labile enterotoxin
- Clostiridium difficile –> Toxin A (eneterotoxin), Toxin B (cytotoxin)
cutaneous antrhax?
painless, papule surrounded by vesicle –> ulcer with black eschar, (painless, pencrotic) –> uncommonly progress to bactremia and death
pulmonary antrhax? / aka?
inhalation of spores –> flu like symptoms that rapidly progress to fever, pulmonary hemorrhage, mediastinitis and shock. aka: woolsorter’s disease
Listeria monocytogenes can cause
- in pregnant –> amnionitis, septicemia, spontaneous abortion
- newborns –> granulomatosis infantiseptica, neonatal meningitis
- immunocompromised patients –> meningitis
- healthy individuals –> mild gastroenteritis
Nontypeable of H. infl stains are the MCC of
A. mucosal infection:
- otitis media
- conjunctivitis
- bronhitis
en-capsuled type B H. influenza causes
invasive infection:
- meningitis
- acute epiglottitis (children)
- septic arthritis
- sepsis
risk factors for Legionnaires’s disease
- Cigarette smoking
- alcoholics
- chronic lung disease
- immunosuppressed states
pseudomonas aeroginosa - manifestations (and associated conditions)
- Pneumonia (Cystic fibrosis, mechanical ventilation)
- otitis externa - swimmer’s ear (diabetes)
- UTI (hospital patients)
- ecthyma gangrenosum (immunocompromised patients)
- sepsis
- osteomyelitis (eg. puncture wounds, drug use)
- wound infection (burn victim)
- hot tub folliculitis (water)
9 nosocomial infections (catheter equipment)
Pseudomonas aeroginosa - mechanism of action
produce
- endotoxin –> fever + shock
- exotoxin A –> inactivates EF-2
- pyocacin –> generates ROS
E. coli - presentation
- EIEC –> dysentery with white blood cells, fever
- ETEC –> traveler’s diarrhea (watery)
- EPEC –> watery diarrhea, usually in children
- EHEC –> dysentery, hemolytic uremic syndrome
Klebsiella - clinical manifestation (and situations)
- lobar pneumonia (and bronchopneumonia) (in alcoholics, diabetes)
- UTI (nosocomial)
- Abscess in Lung and liver
Campylobacter jejuni - clinical manifestations
- Major cause of bloody diarrhea (especially in children)
- Guillain-Barre syndrome
- reactive arthritis
Salmonella typhi vs other salmonella vs shigella - GI manifestation
Salmonella typhi –> constipation, followed by diarrhea
other salmonella –>bloody diarrhea
shigella –> bloody diarrhea (bacillary dysentery)
Penicillin G vs V
Penicillin G –> IV and IM form
Penicillin V –> Oral
Penicillin G and V - clinical use
gram + cocci and robs, gram (-) cocci, spirochetes:
- gram (+) organisms (S. pneumoniae, S.pygoenes, Actinomyces)
- gram (-) cocci (mainly N. meningitidis)
- spirochetes (mainly T. pallidum)
aminopenicillins (amoxicillin, ampicillin) - clinical use
extended spectrum penicillin: 1. H. infl 2. H. pylori 3. E. coli 4. Listeria 5. Proteus 6. Salmonella 7. Shigella 8. Entetococci MNEMONIC : HHELPSS + enterococci
Penicillinase-resistant penicillins - drugs and clinical use
- Dicloxacillin2. Nafcillin 3. Oxacillin 4. Methcillin
S. aureus (except MRSA)
Antipseudomonals - drugs / clinical use
Piperacillin, Ticarcillin
- psudomonas spp and gram-negative robs
- gram (-) robs
β-lactamase inhibitors - use
often added to penicillin antibiotics to protect the antibiotic from destruction by β-lactamase (penicillinase)
Cephalosporins - drugs
1st generation –> cefazolin, cephalexin
2nd generation –> cefoxitin, cefaclor, cefuroxamine
3rd generation –> ceftriaxone, cefotaxime, ceftazidime
4th generation –> cefepime
5th generation –> ceftraroline
organisms typically not covered by Cephalosporins?
mnemonic: LAME
Listeria, Atypicals (Chlamydia, Mycoplasma) MRSA, Entrococci
exception. Ceftaroline (5th) covers MRSA
1st generation cephalosporins - drugs and clinical use
cefazolin, cephalexin 1. gram + cocci 2. Proteus 3. E. coli 4. Klebsiella cefazolin used prior to surgery to prevent S. aureus wound infection
2nd generation - drugs and clinical use
cefoxitin, cefaclor, cefuroxamine
- like 1st generation (gram + cocci, proteus, E.coli, Klebsiella)
- H. infuenzae
- Enterobacter aerogenes
- Neisseria spp
- Serratia marcescens
3rd generation - drugs and clinical use
ceftriaxone, cefotaxime, ceftazidime
serious gram (-) infections resistant to other β-lactams
- ceftriaxone –> meningitis, gonnorrhea, disseminated Lyme disease
- Ceftazimide –> Pseudomonas
4th generation - drugs and clinical use
cefepime
gram (-) organism, with high activity against Pseudomonas
2. gram (+)
5th generation - drugs and clinical use
ceftaroline 1. broad gram (+) 2. borad gram (-) INCLUDING MRSA DOES NTO COVER PSEUDOMONAS
Cephalosporins - toxicity
- hypersensitivity reactions
- autoimmune hemolytic anemia
- disulfiram-like reaction
- vitamin K deficiency
- exhibit cross-reactivity with penicillins
- Increases aminoglycosides mediated nephrotoxicity
Carbapenems - drugs
- Imipenem
- Meropenem
- Doripenem (newer)
- Ertapenem (newer)
Carbapenems - clinical use
- Gram (+) cocci
- Gram (-) robs
- anaerobes
WIDE spectrum but significant side effects limit use of life threatening infection or after other drugs have failed
Ertapenem has limited pseudomonas coverage
Carbapenems - toxicity
- GI distress
- skin rash
- CNS toxicity (seizurs) at high plasma levels (less risk with meropenem)
Monobactams (Aztreonam) - clinical use
- Gram (-) robs ONLY (no anaerobesm no gram (+))
For penicillin allergic patients and those with renal insufficiency who cannot tolerate aminoglycosides
Monobactams (Aztreonam) - side effects
usually nontoxin –> occasional GI upset
Vancomycin - clinical use
gram (+) bugs only: serious Multidrug resistance organisms, including: - MRSA - S. epidermidis - Clostiridium difficle (oral) - Enterococcus species
Vancomycin - toxicity
well tolerated
- nephrotoxicity
- ototoxicity
- thrombophlebitis
- red man syndrom (diffuse flushing)
red man syndrom - appearance, caused by, solution
- diffuse flushing
- it is caused by vancomycin
- pretreatment with antihistamines and slow infusion rate
Fluroroquinolones - drug that i not -floxacin
enoxacin
Fluororoquinolones - clinical use
- gram (-) robs of urinary and GI tracts (including Pseudomonas)
- Neisseria
- some gram (+)
Fluororoquinolones - toxicity
- GI upset
- superinfections
- skin rash
4 .headache/dizziness - leg cramps and myalgias (less commonly)
- Prolonged QT
- tendonitis or tendon rupture (if >60 or prednisone)
- contraindicated in pregnancy, nursing mothers, children under eighteen –> possible damage to cartilage
metronidazole - clinical use
- Giardia
- Entamoeba
- Trichomonas vaginalis
- Garndenella vaginalis
- Anaerobes (Bacteroides, C. difficile)
- H. pylori
metronidazole - adverse effects
- Disulfiram-like reaction (severe flushing, tachycardia, hypertension) with alcohol
- headache
- metallic taste
Daptomycin - clinical use
- S. aureus SKIN infection (esp MRSA)
- bacteremia
- endocarditis
- VRE
Daptomycin - toxicity
- Myopathy
2. rhabdomyolysis
Antimicrobial therapy - protein synthesis - divisions and drugs
50S –> 1. Chloramphenicol 2. Clindamycin 3. Linezolid 4. Macrolides 5. Streptogramins
30S –> 1. aminoglycosides 2. Tetracyclines
50S –> 1. Chloramphenicol 2. Clindamycin 3. Linezolid 4. Macrolides 5. Streptogramins
30S –> 1. aminoglycosides 2. Tetracyclines
- Gentamycin
- Neomycin
- Amikacin
- Tobramycin
- Streptomycin
Aminoglycosides - clinical use
- severe gram (-) rob infection
- Synergistic with β-lactam antibiotics
- Neomycin for bowel surgery
Aminoglycosides - side effects
- nephrotoxicity (worse with cephalosporins)
- Neuromascular blockage
- Ototoxicity (esp with loop diuretics)
- Teratogen
Tetracyclines - clinical use
- Borrelia bugdorferi
- M. pneumoniae
- Rickettsia
- Chlamydia
- acne
- Ehrichiosis/Anaplasmosis
- Q fever
Tetracyclines - toxicity
- GI distress
- discoloration of teeth and inhibition of bone growth in children
- photosensitivity
- Contraindicated in pregnancy
chloramphenicol - clinical use
- meningitis (H. infl, N. meningitis, S. pneumoniae)
- Rocky Montain spoted fever (R. ricketsi)
Limited use owing to toxicities but often still used in developing countries (low cost)
chloramphenicol - toxicity
- anemia (dose dependent)
- aplastic anemia (dose independent)
- gray baby syndrome
Clindamycin - clinical use
- anaerobic infections in aspiration pneumonia, lung abscess, oral infection
- invasive A streptococcal infection
- Gardenella vaginalis
Clindamycin - toxicity
- pseudomembranous colitis
- fever
- diarrhea
Linezolid - clinical use
gram (+) species MRSA and VRE
Linezolid - toxicity
- bone marrow suppression (esp thrmbocytopenia)
- peripheral neuropathy
- seretonin syndrome
Macrolides - drugs
- Azythromycin
- Clarithromycin
- Erythromycin
Macrolides - clinical use
- Atypical pneumonias (Mycoplasma, chlamydia, legionalla
- STI (chlamydia)
- Gram (+) cocci (streptococcal infections in patients allergic to penicillin)
- B. pertusis
Macrolides - side effects
- GI uspet 2
- Arrhytmia (long QT)
- Acute cholestatic hepatitis
- Rash
- eosinophilia
- increased serum levels of theophyllines, oral anticoagulants
- inhibit P-450 (clarithromycin and erythrmicycin)
- contraindicated in pregnancy (embryotoxic)
Antimicrobial therapy - Folic acid synthesis - drugs
- Sulfonamides: a. sulfadiazine b. sulfamethoxazole (SMX)
c. sulfisoxazole - Trimethoprim (or pyrimethamine)
- dapsone
Sulfonamides - toxicity
- hypersensitivity 2. G6PD hemolysis
- nephrotoxicity (tumbulointestinal nephritis)
- photosensitivity 5. kernicterus (infants)
- displace other drug from albumin (eg. warfarin)
Treatment of highly resistant bacteria
MRSA: vancomycin, daptomycin (esp skin), linezolid, tigecycline, ceftaroline
VRE: linezolid and streptogramins (quinupristin, dalfopristin)
Multidrug-resistant P. aeruginosa: polymixins B and E (Colistin)
Multidrug-resistant Acinetobacter baumannii: polymixins B and E (Colistin)