First Pass Miss Exam 1 Flashcards
How does RAS work?
It sits attached to the membrane, with a GTP binding domain.
Normally, its inactive form has GDP bound. Once activated by tyrosine kinase phosphorylation with a bridging protein, it has GTP bound.
GTP-bound Ras can activate RAF / MAPK and mTOR cascades to signal cell proliferation
How does the cell progress from G1 to S phase? When is the restriction point?
- Growth factors lead to accumulation of cyclin D via MYC.
- Cyclin D activates CDK which start phosphorylating Rb, allowing E2F to begin producing cyclin E (think E for E2F).
- G1 restriction point -> point of no return where cyclin E has accumulated enough that the cell cycle will move forward without more growth factor / cyclin D
- Hyperphosphorylated Rb has now completely lost control of E2F, which stimulates cyclin A from E2F-targeted genes
What actually initiates mitosis?
Phosphorylation of the cyclin B / CDK complex and accumulation of these complexes in the nucleus. These processes can be inhibited by G2/M checkpoint mechanisms.
G1 - cyclins D -> E
S - cyclin A
G2 - cyclin B
M - cyclin B
DEAB
What major cyclins are present at each phase of the cell cycle?
What is the function of the p53 protein at the G1/S checkpoint?
Upregulates DNA repair and also induces p21, a CDK inhibitor protein to arrest a cell cycle
-> will suicide if DNA repair is successful, otherwise upregulates BAX, and suppresses cyclins / Bcl-2
How does a growth factor like PDGF induce cyclin D formation?
PDGF -> dimerize than autophosphorylate RTK’s, activate Ras via bridging proteins, which can activate mTOR and MAPK pathways. MAPK / mTOR induce expression of MYC. MYC-MAX induces transcription of cyclin D.
What are the two types of physiologic hyperplasia and give examples of each?
- Hormonal induced
- > proliferation of breast epithelium in puberty / pregnancy
- > smooth muscle of uterus in pregnancy - Compensatory
- > regeneration of liver after hepatectomy
- > enlargement of contralateral kidney after unilateral nephrectomy
What is the example of connective tissue metaplasia?
Skeletal muscle -> bone after trauma, calsed myositis ossificans
Since they are both derived from mesoderm
What causes cardiac hypertrophy and what are its basic mechanisms?
Increased workload due to valvular stenosis or hypertension
Mechanisms:
Mechanical / trophic signals lead to transcription of normal as well as re-expression of fetal / neonatal genes which are more efficient and increase cardiac capacity / reduce workload
What is the most common reason for autophagy?
Macroautophagy - for survival in low nutrient conditions (during atrophy)
-> vs heterophagy, which is done to foreign materials by professional phagocytes like PMNs / MACs
What happens to the intermediate filaments in alcohol hepatitis?
Tend to form aggregates with breakdown of cytoskeletons
What are the pathways which typically cause accumulation of endogenous and exogenous substances in cells?
Endogenous:
Cellular reaction rate imbalances (excess production or decreased removal)
Defects in cellular reactions (abnormal synthesis, metabolism, or transport)
Exogenous:
Lack of metabolic / secretory pathways for removal
How does bilirubin appear as a pigment under the microscope? How to distinguish from lipofuscin?
A green to golden-brown pigment. Although it can be brown and near the nucleus at times, typically it is found in the bile ducts / bile canaliculi, and is much more globular in appearance (lipofuscin is very granular)
How does glycogen appear on H&E and how can it be definitively told apart from cholesterol / TAGs?
Small, clear, cytoplasmic vacuoles
- > can be told apart by periodic acid schiff stain for carbohydrates
- > accumulates in GSDs like Pompe’s and diabetes mellitus
What is transferrin saturation? What is the normal amount?
Serum iron levels (variable) divided by iron binding capacity (level of transferrin)
Normally, about 1/3 of transferrin iron-binding sites are filled
What are some things that can cause intrahepatic / extrahepatic cholestasis?
Intrahepatic - metastases of the liver, destruction of bile ducts, cirrhosis, etc
Extrahepatic - Gall stones stuck in bile duct (choledocholithiasis), malignancies pushing on bile duct (i.e. pancreatic cancer), etc
What are the deleterious cell reactions which can occur with a depletion of ATP?
- Increased H20 / Na in cell -> Decreased function of Na/K ATPase
- Drop in cellular pH leading to chromatin clumping -> glycolysis / fermentation
- Influx of Ca+2 -> failure of Ca+2 ATPase
- Abnormal protein synthesis -> loss of RER integrity (mostly due to swelling because of the above effects)
What is the mechanism of carbon tetrachloride toxicity (CCl4)?
CCl4 is metabolized by CYP450s in the liver to make CCl3 radical, which starts the lipid peroxidation of membranes in the cell.
- > decreases RER protein synthesis in liver, leading to apoprotein deficiency and fatty change of liver
- > also damages mitochondria / cellular membranes leading to cellular death longterm
How does the appearance of the cytoplasm change in necrosis and why?
- Increased eosinophilia
- > RNA degraded by lysosomal enzymes
- > Decreased pH due to lactic acidosis
- > denatured proteins accumulate - Dense, clumped, irregular appearance
- > decreased glycogen which normally gives cell a granular appearance
- > disrupted cytoskeleton from enzymatic activation
What are the causes of liquefactive necrosis? What is the exception?
- Pyogenic bacterial infections with acute inflammatory infiltrate, and release of WBC lysosomal enzymes which enzymatically digest tissue.
- Exception - caused by hypoxia / ischemia in CNS due to high lipid content and a small amount of PMNs
What is fat necrosis and where does it typically occur?
Necrosis from inappropriate release and activation of pancreatic lipases, leading to breakdown of membranes / intracellular TAGs to free fatty acids + MAGs.
-> leads to saponification (soap formation) of calcium bound to free fatty acids
-> typically occurs in pancreas (acute pancreatitis)
What are the first steps in induction of the intrinsic pathway?
Sensor proteins are activated due to stressors like DNA damage or excessive misfolded proteins.
Pro-apoptotic proteins like BAX and BAK replace anti-apoptosis protein BCL-2 in mitochondrial membrane
-> increasing mitochondrial membrane permeability
What is the gross and microscopic appearance of fat necrosis?
Gross - white, chalky patches of fatty on pancreas usually
Microscopic - hazy, basophilic outlines of adipocytes with acute inflammation associated.
-> looks like coagulative necrosis + basophilic hue from the calcium
What is the main mechanism of the extrinsic apoptosis pathway?
FasL on T-cells binds Fas receptor on cell to die.
- Binding of FasL
- Fas receptors cross-link
- Binding of Fas-associated death domain (FADD) adaptor protein
- Activation of Caspase 8 and executioner caspases