Final Review Exam 2 Flashcards
GTP is used in translation when:
An AA is added, when a EF is added, and when the ribosomal complex disasociates.
Termination and STOP codons
Ribosome recognized STOP codon, RFs bind to the A site and cleave the polypeptide.
Prokaryotic Elongation Inhibitors mechanisms of action:
Tetracycline: bind smal SU and block entry of AA-tRNA.
Chloramphenicol: inhibits peptidyl transferase.
Clindamycin and erythromycin: binds to large SU and blocks translocation of ribosome.
Streptomycin: binds to small SU and interferes with the binding of fmet-tRNA.
Eukaryotic Elongation Inhibitors mechanisms of action:
Cyclohexamide: inhibits peptidyl transferase.
Diphtheria toxin: inactivates eEF-2.
Shiga toxin and Ricin: binds to large SU and blocks entry of AA-tRNA.
Secretory pathway signals (4)
ER lumen: KDEL
Secretory vesicle: Trp-rich domain.
Lysosome: Mann 6-P
CM: N terminal apolar
Cytoplasmic pathway signals (3)
Mitochondria: N term a-helix
Nucleus: Lys Arg rich
Peroxisome: SKL
Mechanism of AD
APP breaksdown to amyloid beta peptide (AB). AB forms plaques in brain
Mechanism of PD
a-synuclein aggregates to form Lewy bodies. Causes death of dopaminergic neurons in substantia negra.
Mechanism of HD
Huntington gene is mutated resulting in CAG repeats, causing poly-Gln. Causes selective death of cells in basal ganglia.
GEF, GTPase and GAP
GEF causes ADP –> ATP
GTPase does opposite
GAP stimulates GTPase
Gq pathway
GTP –> PLC –> DAG, IP3
IP3 –> Ca 2+ (2nd messenger) –> PKC
Viagra mechanism
Inhibits cGMP PDE
Increases cellular cGMP –> smooth muscle relaxation, vasodilation.
NO mechanism
Activates guanylate cyclase
GMP –> cGMP (smooth muscle relaxation and vasodilation).
Cholera and Pertussis
Cholera: prevents inactivation of Gs (AC always on)
Pertussis: prevents activation of Gi (AC not inhibited).
GRKs
Phosphorylate GPCR. Arrestin binds and inactivates GPCR.
Reciprocal and Robertsonian transocations
Reciprocal: exchange of material between nonhomologues
Robertsonian: Long arm of 2 chromosomes combined. Short arm lost.
Imprinting
Silencing of a gene.
If a gene is “paternally imprinted”, the paternal gene is silenced.
These are reset after meiosis in each generation.
Same genotype but multiple phenotypes:
Pleiotropy (PKU)
Multiple genotypes but single phenotype:
Ex: CF
Penetrance
Frequency a gene manifests itself
Rb
Expressivity
Variation in phenotype