Exam II Flashcards

1
Q

(first notes)
Genetic Diversity (in populations)

A

Five Big Sources
- Mutation
- Gene Flow
- Non-Random Mating
- Genetic Drift
- Natural Selection

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2
Q

Mutation

A
  • changes to DNA sequence
  • creates new alleles (form of a gene)
  • dominant
  • recessive
  • deleterious
  • lethal
  • rate of mutation is very low (1 in 100,000 cell divisions per gene)
  • somatic mutations are largely irrelevant to evolution-not inherited
  • germ line mutations can be inherited
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3
Q

Gene Flow

A
  • introduction of alleles from outside the population
  • dispersal
  • immigration brings alleles into your population
  • emigration takes alleles
  • reproduction then transmits to next generation
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4
Q

Non-Random Mating

A
  • creates non-random genotype frequencies
  • genotype: combination of alleles
  • assortative mating: mates chosen based on similarity
  • creates homozygotes
  • inbreeding as extreme case
  • disassortative mating: mates chosen based on dissimilarity
  • creates heterozygotes
  • hybrid vigor as extreme case
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5
Q

Genetic Drift

A
  • random fluctuations in allele frequencies due to “sampling”
  • fluctuations in allele frequencies occur among generations
  • in large populations, fluctuations are cyclic
    ~ no long-term change in allele frequencies
  • in small populations, fluctuations can cause elimination of some alleles
    ~permanent change in allele frequencies
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6
Q

Genetic Drift- Founder Effect

A
  • occurs when new population is established
  • only small number of individuals from source population
  • limited genetic (allelic) diversity in new population
  • classic examples: islands
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7
Q

Genetic Drift- Bottleneck Effect

A
  • occurs when population is reduced to very small numbers
  • only small number of individuals survive
  • eliminates genetic (allelic) diversity in next generation
  • classic examples: endangered species (think cheetahs)
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8
Q

Natural Selection

A
  • some alleles (or allele combinations) confer an advantage
  • this advantage is called fitness which refers to:
  • survival and reproduction
  • if “who wins and who loses” is tied to the fitness differences of their heritable traits, then natural selection is occurring
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9
Q

Patterns of Selection

A
  • Directional selection: traits at one end of the continuum of possibilities are more fit (peak shifts)
  • Stabilizing selection: traits at one end of the continuum of possibilities are more fit (distribution gets narrower)
  • Disruptive selection: traits at one end of the continuum of possibilities are more fit (two peaks form)
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10
Q

(second notes)
Prokaryotes
- metabolic diversity
- bacteria v. archaea

A
  • kary: refers to nucleus (pro- do not have)
  • characteristics
  • unicellular
  • ver small
  • no nucleus
  • no organelles
  • circular DNA (not literally circular, but very short)
  • metabolic diversity
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11
Q

Metabolic Diversity (Photoautroph)

A
  • photoautotroph (photosynthesizers)
  • source of carbon: CO2
  • source of energy: light
    ~ oxygenic: like eukaryotes; use H2O as electron donor; O2 evolved as byproduct
  • chemoautotroph
  • source of carbon: CO2
  • source of energy: inorganics
    ~ oxidize inorganic substances to take electrons
    ~ equivalent of using metals as substitute for the sun
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11
Q

Metabolic Diversity (Photoautroph)

A
  • photoautotroph (photosynthesizers)
  • source of carbon: CO2
  • source of energy: light
    ~ oxygenic: like eukaryotes; use H2O as electron donor; O2 evolved as byproduct
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12
Q

Metabolic Diversity (Chemoautotroph)

A
  • chemoautotroph
  • source of carbon: CO2
  • source of energy: inorganics
    ~ oxidize inorganic substances to take electrons
    ~ equivalent of using metals as substitute for the sun
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13
Q

Metabolic Diversity (Photoheterotroph)

A
  • photoheterotroph
  • source of carbon: organics
  • source of energy: light
    ~ photosynthesis can make ATP, but not fix carbon
    ~ carbon must be absorbed
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14
Q

Metabolic Diversity (Chemoheterotroph)

A
  • chemoheterotroph
  • source of carbon: organics
  • source of energy: organics
    ~ the eaters: “eat” to get carbon and to get energy
    ~ you and me and prokaryotes
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15
Q

Archaea

A
  • two domains of life (other being Eukarya)
  • Archaea are mostly extremophiles and anaerobic
    ~ branch tails
    ~ L-glycerol
    ~ Ether linkages
    ~ no peptidoglycan
    ~ similar to eukaryotes (DNA replication)
    ~ multiple polymerase, like eurkaryotes (gene expression)
16
Q

Bacteria

A
  • Bacteria are mostly not extremophiles; much more diversity
    ~ unbranched tails
    ~ D-glycerol
    ~ Ester linkages
    ~ peptidoglycan (protein; sugar)
    ~ dissimilar from eukaryotes (DNA replication)
    ~ 1 RNA polymerase (gene expressions)
17
Q

Eukaryotes

A
  • Characteristics
  • unicellular or multicellular
  • large
  • nucleus
  • organelles
  • linear DNA
  • limited metabolic diversity in most groups
18
Q

Protista

A
  • characteristics
  • unicellular (but, some colonial and some multicellular)
  • very small (but, some large)
  • eukaryotic (nuclei, endomembranes, organelles, linear DNA)
  • Ancestral groups of animals, plants, and fungi
  • many parasitic species of enormous health concern
  • evolution and biology of most are very poorly known
  • cellular diversity (cell surface)
  • naked cell membrane
  • shell (or, ‘test’)
  • unicellular (chlamydomonas)
  • colonial (volvox)
  • multicellular (ulva)
  • metabolic diversity (photoautotroph, chemautotroph (mixotrophs), photoheterotroph, chemoheterotroph)
19
Q

Plants

A
  • general characteristics
  • unicellular or multicellular
  • eukaryotic
  • cell walls
  • photoautotrophs
  • some chemoautotrophs; mixotrophs
20
Q

Fungi

A
  • characteristics
  • unicellular or multicellular
  • eukaryotic
  • cell walls (covering multiple cells)(very different from plant cell walls)
  • chemoheterotrophy
  • many decomposers, but some predators, too
21
Q

Animalia

A
  • characteristics
  • multicellular
  • eukaryotic
  • no cell walls
  • chemoheterotrophy
  • nervous system and muscles (in almost all)