Exam 8 (Infectious Disease) Flashcards
Pathogen
Organism or agent that can infect individual causing disease
Virulence
Potency/severity of pathogen
Yersinia pestis kills 50-75%
Candida albicans low risk of serious illness
Colonization
Host is carrying organism but no clinical expression or immune response
Infection
Invasion of pathogen causing immune response
Pathogen evasion
Opportunistic infection
Organism invades host and waits to cause disease till immune system is compromized by something else
Mycoplasm
Smallest bacteria,
Not visible under microscope.
Don’t gram stain
Must use acid-fast to see
Capsule
Hydrophilic gel
Protects cell from immune attack
Helps adhesion
Cell wall
Rigid
Prevents lysis
Provides shape for cell
Gram (+) or Gram (-)
Gram positive cell wall make up
Peptidoglycan with cross linked peptide chains.
Hard to get rid of bc of thick membrain.
Resistant to mammalian enzymes except for lysozime.
Teichoic acids help with adhesion and induces inflammatory reaction
How do we attack gram positive cell clinically
Target peptidoglycan with penicillin.
Blocks peptide cross linking.
Causes cell lysis
Gram negative cell wall make up
Impermeable outer membrane containing lipoplysaccharide endotoxin, phospholipid A, and O antigen.
Periplasm is single layer of peptidoglycan that makes beta-lactamase.
Gram stain
- Crystal Violet
- Iodine (mordant) makes crystal violet hang on
- Acetone or ethanol washes out gram negative
- Saffranin dies gram negative
Acid fast stain
Stain poorly
1. Carbolfuchsin dye (mycolic acid soluble) stains red
2. Organic solvent (acetone or ethanol) extracts stain from non-acid fast
3. Methylene blue stains non acid fast
LPS endotoxin
Gram negative
O antigen
H antigen
Exotoxin
Secreted from bacteria into surrounding body fluids.
Local or systemic
A is pathogen
B is recepto binding facilitating A delivery
C reactive protein
APR
Best lab value to judge treatment response.
Rises within hours of infection.
Takes a week to normalize
Erythrocyte Sedimentation Rate
Rises within 2 days of infection
Can rise 3-5 days after antibiotics initiated
Normalizes in 3-4 weeks
Wet mount
Normal saline to identify cells as pathogens
Potassium hydroxide (KOH) to identify fungi
Dark field microscopy
Identifies syphilis spirochetes
Minimum Inhibitory Choncentration
Minimum amount of ABx to prevent growth after 24 hours of incubation.
Minimum Bacteriocidal Concentration
Minimum concentration of ABx that causes microbial death killing 99.9% of colonies in 18-24 hrs
Blood agar hemolysis
Tests bacteria ability to lyse red blood cells.
Hemolysins.
Alpha is partial
Beta is complete
Gama is none
Coagulase test
Coagulase forms fibrinogen into fibrin to form clot
PCR
Polymerase Chain Rxn
Detects RNA or DNA in viruses
Very specific test.
Amplifies nucleiic acid levels
Antigen testing
Reagent ANTIBODY detects antigens and binds them triggering postive test
Serology
Detect antibody response by measuring antibody levels.
IgM in current or recent infection.
IgG from past infection
In newborns IgM is congenital infection and IgG is just antibodies from mom
Fungus Structure
Thick cell wall of chitin and beta glucan.
Hyphae develop after infection
Spores can be infective
Thermal dimorphism
Spores are infective, not hyphae.
Once in host at body temp fungus grows and becomes infection
Lab testing fungi
Hard to do.
Antigen testing is sensitive and not specific
KOH wet mount
Bacterial medicine target
DORA
DNA
Organelles (lack of nucleus, lack of membrane, 70s ribosomes)
Reproduction
Average size (smaller)
Empiric antimicrobial therapy
Educated guess at best treatment.
Used while waiting on culture to grow.
What influences empiric antimicrobial therapy
Site of infection
Pt history
Local susceptibility data (antibiogram)
Broad spectrum ABx
Work for lots of bacteria.
Saved for emergency situation when pt is going downhill and we don’t know what microorganism is causing it
Saved to avoid causing ABx resistance.
Can alter normal bacteria and precipitate superinfections like C. diff
Bacteriostatic
Stop growth of bacteria
Bacteriocidal
Kill bacteria.
Kill 99.9% in 18-24 hrs.
What to consider with site of infection
Capillaries carrie ABx into tissues.
Capillary permeability varies depending on where at in the body.
BBB
Prostate, testes, and placenta are natural capillary barriers
Lipid solubility of drug.
Size of drug.
Protein binding.
Transporters/efflux pump interaction in CNS
Least toxic ABx
Beta lactams
(ex. penicillin)
Additive risk
Using multiple drugs with same potential toxicities increases risk of pt having that problem
Oral ABx
Appropriate for mild infections
Outpatient
Bioavailability may limit use
Parenternal ABx
For drugs that are poorly absorbed in GI.
Serious infections that require high serum concentrations.
Switch to oral when pt stable
Concentration dependent klling
More effective at higher concentrations.
4-64x MIC
Bolus infusion can achieve high levels of rapid killing
Concentration dependent killing examples
Tobramycin
Azithromycin
Time depending killing dosing
Efficacy determined by percentage of time blood concentration is above MIC.
Used for long time.
Examples of Time dependent killing ABx
Beta-lactams
Clindamycin
linezolid
Post antibiotic effect
Continued suppression of microbial growth even after concentration falls below MIC.
Drugs with long post-antibiotic effect usually only needed once daily
ABx with long post antibiotic effect
Aminoglycosides
Fluoroquinolones
Narrow spectrum ABx
Act only single or limited group of bacteria
Extended spectrum ABx
Effective against G+ bacteria and a good number of G-.
ABx Combination therapy
Single agent is usually best but combonation is useful in certain pts.
Drugs can work really good together but rare (synergism = beta lactams + aminoglycosides).
Some ABx only work if organisms are multiplying.
Can induce resistance
What causes most antibiotic resistance
Genetic alterations of the microbe
Prophylactic use of antimicrobials
Prevention of infection instead of treatment.
Used shortest duration possible
Dental procedures especially if pt has cardiovascular disease.
Surgery to prevent postsurgical infection.
Common ABx after dental procedure preventative
amoxicillin
Common ABx postsurgery preventative
Cefazolin
Vancomycin
Inactivated vaccine
Killed version of pathogen.
Not as strong immunity.
Ex. flu, hep A, rabies
Live-attenuated vaccine
Weakened form of pathogen
Strong, long lasting
One or two doses good for life.
Not good for immunocompromised pts.
Refrigeration required.
Ex. MMR, rotavirus
mRNA vaccine
Inject mRNA for making specific proteins.
mRNA enters human cell and causes protein to be made.
Immune response develops to that protein
Subunit, recombinant, polysaccharide, conjugate vaccines
Uses a piece of specific pathogen.
Strong immune response.
Can be used in immunocompromised.
Boosters may be needed.
Ex. H. flu, Hep B, HPV, Varicella zoster, meningitis, pneumonia
Toxoid vaccine
Contain toxin made by pathogen.
Immune response to toxin.
Booster shots.
Ex. Diptheria, Tetanus
Viral vector vaccine
Uses modified version of different virus as vector for protection.
Johnosn & Johnson COVID-19 pulled from market
Concentration in liquid drugs
Weight of drug per volume
Pediatric antibiotic and antifungal
Usually from dry powder.
Some require refrigeration after mixing
Stable 10-14 days after mixing
Units of dosing
mg of drug/kg of pt
mg/kg/day split that up between however many daily doses
1 kg in lb
2.2 lbs
Incidence
Number of NEW cases in population over certain time
Prevalence
TOTAL number of cases of disease at specific time
Mortality rate
Frequency of death over certain time
Risk
Probability individual in population will develop a disease over time
Clostridium botulinum
Botulism
G+ bacilli
Spore forming
Found in soil
Exotoxin producing
Clostridium botulinum epidemiology
200 annual cases
Foodborne from honey in infants, canned food
Wound botulism IV drug abuse
Clostridium botulin pathogenesis
Toxin taken up in presynaptic terminal.
Acts on SNARE protein inhibiting ACh release into synaptic cleft so muscle can’t contract (flaccid paralysis)
Clostridium botulin clinical findings
Symptoms start 18-24 hrs after ingestion
Inability to swallow
Speech difficulty
Death from respiratory or cardiac arrest
Floppy baby
Clostridium botulin management
ICU
Ventilation
Antitoxins through IV
Botulinum immune globulin
Clostridium tetani
Tetanus
G+ bacilli
Spore forming make it look like tennis racket
Exotoxin producing
Clostridium tetani epidemiology
Rare
Neonatal tetanus
High risk for elderly, diabetics, newborn, unvaccinated mothers, migrants
Clostridium tetani pathogenesis
Spores into body through wound
Spores multiply.
Anaerobic conditions ideal
Necrotic tissue
Makes tetanolysin and tetanospasmin (Low lethal dose)
GABA and glycine blocked by tetanospasmin causing spasms and convulsions
Clostridium tetani clinical findings
Localized tetanus where only one area of body affected is rare.
Generalized tetanus more common
Generalized tetanus
Muscle of face and jaw affected first.
Stiffness
Spasms
Hyperreflexia
Respiratory muscle spasm causing respiratory failure
Opisthotonos posture
Neonatal tetanus
Symptoms at 7 days old
In infants 28 days older or less
From umbilical stump from unvaccinated mother
Tetanus mangement
IM human tetanus Immune globulin within 24 hrs (most important)
Clean wound
Give antibiotics
Keep in calm, quiet environment
Clostridium tetani prevention
Vaccination and boosters every 10 yrs
Infection does NOT confer immunity
Immunization of pregnant women
Yersinia pestis
Bubonic Plague
G- coccobacilli looks like safety pin
Facultative anaerobe
Epizootic
Yersinia pestis etiology
usually rodent to flee to human (arthropod vector).
Then human to human (respiratory droplet).
Can also be directly from rodent (direct)
Prairie dogs and rats
Yersinia pestis mechanism
Capsular Antigen F-1 protects it against phagocytosis.
Lipopolysaccharide exotoxin causes systemic shock and pro-coagulation
V and W antigens
Plasminogen activator allows adhesion to extrcellular matrix proteins
Bubonic plague clinical findings
Incubation 2-7 days.
Sudden onset of severe fever, malais, myalgia, chills.
Large lymph nodes (lymphadenitis)
Septicemic plague clinical findings
Sudden onset of fever, chilld, AMS
Tissue necrosis
Purpuric papules
Pneumonic plague
Incubation is 2-3 days.
From droplet inhalation.
Sudden onset of myalgia, weakness, dizziness
Cough, dyspnea, chest pain
Yersina pestis treatment
Aminoglycosides (streptomycin and gentamicin) are first line
Doxycycline
Chloramphenicol in poor countries
Exposure prophylaxis use fluoroquinolones (levofloxacin, moxifloxacin, ciprofloxacin)
Myobacterium leprae
Leprosy
Hansen’s disease
Acid fast bacilli
Aerobic
Myobacterium leprae epidemiology
mostly in india, Brazil, Indonesia
Happens in second and third decades of life.
Twice as common in men.
Rare in children.
Myobacterium leprae transmission
Human to humans from respiratory droplets.
Myobacterium leprae etiology
2-10 yrs
Only 1-5% of human population susceptible
Myobacterium leprae pathogenesis
Intracellular
In cooler body tissues
Skin
Peripheral nerves (Schwann cells)
Nose, pharynx, larynx, eyes , testicles
Myobacterium leprae Tuberculoid
Strong CMI response
Positive lepromin test
Limited growth
CD4 T cells
Cytokines
INterferon-gamma
Inflmmatory response causes nerve damage
Myobacterium leprae Lepromatous
Pooor CMI response
Negative lepromin skin test
Lesions have lots of bacteria
Infected skin histiocytes
Interferon-beta
Direct contact of organisms causes nerve damage
Myobacterium leprae clinical findings
Myopathy
Neuropathy
Peroneal nerve palsy (foot drop)
Nasal congestion
Epistaxis
Lagopthalmos
Blindness
Myobacterium leprae treatment
Dapsone
Rifampin
Clofazamine
all together
Ebolavirus etiology
Reservoir in fruit bats
Given to humans through contact with bushmeat or apes.
Human to human after zoonotic transmission
Blood born
Reusing needles
Burial of diseased
Ebolavirus pathogenesis
Hepatocyte and endothelial cell damage
Multiorgan failure
Hypovolemic shock
Hypoxia
Hemorrhage.
Ebolavirus cllinical findings
SUdden onset
Fever, chills, malaise, headache
Myalgia
Arthralgia
Maculopapular rash.
SOB
Focal hepatic necrosis
Post ebola syndrome
Recovery takes 7-12 days
Ebolavirus diagnosis
RNA levels peak 7 days after onset.
Early use antigen capture ELISA and RT-PCR
Later use IgM and IgG serology labs
Ebolavirus management
IV fluids
Inmazeb (monoclonal antibodies)
Remdesivir and favipiravir antiviral therapies
Ebolavirus prevention
21 day quarentine
Don’t mess with apes or fruit bats.
PPE
Contact tracing, disinfection, sanitization
Smallpox
Poxviridae family
Linear double stranded DNA virus
8 categories (Orthopoxvirus most important)
Only fully eradicated virus.
Only virus that fully replicates in cytoplasm.
Smallpox pthogenesis
Respiratory droplet inhalation
Spread through lymph nodes
Smallpox clinicla findings
Incubation is 12-14 days
Fever, headache, backache at start.
Lesions erupt over 14-18 days.
All lesions at same stage
Orophayngeal ulceration
Severe systemic. Cold be hemorrhagic and malignant
Smallpox diagnosis
Rule out chicken pox, HSV, VZV first.
PCR.
Vesicular scrapings.
Consult infectious disease and CDC
Smallpox Vaccination
First was live vaccinia virus (cow pox) caused symptoms sometimes.
Second was cloned vaccine used in military
Small pox treatment
No antiviral therapy
Cidofovir may have high activity against poxviruses
Vaccinia immune globulin used.
Poliovirus
Picornaviridae family.
Single stranded RNA
Enterovirus.
Acute flaccid paralysis
Poliovirus etiology
Eradicated in US, but had outbreak in 2022
Poliovirus pathogenesis
Fecal-oral transmission
Viral replication in tonsils and ileum (Peyer’s patches)
Viral dissemination effects peripheral nerve axons and lower motor neurons in the anterior horn.
Poliovirus clinical findings
Incubation is 7-14 days.
90% asymptomatic.
Aseptic meningitis
Can be paralytic or nonparalytic
Postpoliomyelitis happen years later
Paralytic poliomyelitis
Flaccid asymmetric parlysis
Muscle wekaness
Incoordinaition
Painful spasms
Max recovery in six months
Nonparalytic poliomyelitis
Aseptic meningitis
Neck stiffness
Fever
Headache
Rapid and complete recovery
Postpoliomyelitis syndrome
Happens years later.
New onset of weakness and pain.
Progressive muscle limb paresis.
Muscle atrophy.
More common in women
Poliovirus diagnosis
Suggested by aseptic meningitis with acute flaccid weakness and travel to endemic areas
Stool analysis.
CSF analysis.
Lots of diagnoses for acute flaccid paralysis
Poliovirus treatment
No antiviral therapy.
Immune globulin
Respiratory support
Physiotherapy
Poliovirus eIPV vaccine
Inactivated
IM
Trivalent
In US and developed countries
Induces IgA
Poliovirus OPV vaccine
Live, attenuated
Oral administration.
Preferred in eradication efforts.
Don’t give to immunosuppressed
Trivalent OPV associated with vaccine derived polio.
Bivalent better for eradication
Rickettsia prowazekii transmission
Person itches and bacteria from flea (Pediculosis humanus) poop goes inside person.
Flying squirrels have the lice
Rickettsia prowazekii
Epidemic Typhus
Intracellular
G-
Epidemic typhus epidemeology
Uncommon.
Crowded unsanitary regions
Outbreaks in colder months
Epidemic typhus clinical findings
10-14 day incubation
Fever
Cough
Delirium
Rash
Improvement 13-16 days after onset with quick recovery
Myalgia
Arthralgia
Epidemic typhus diagnosis
THrombocytopenia
PCR testing
IgM or IgG serology
Epidemic typhus treatment
Doxycycline (no preg)
Choramphenicol
Borrelia burgdorferi
Lyme disease
Spirochete
Transmitted by deer tick (Ixodes scapularis) that live on deer or mice
Lyme disease epidemiology
Occur more in late spring and summer
Seen more in northeast US
Lyme disease Clinical Findings
Erythema migrans (bullseye)
CN VII palsy
Arthritis
Neuropathy
Encephalitis
ELISA Test
Uses enzyme immunoassay to detect presence of ligand in liquid sample using antibodies against protein being measured
Wester blot
Tests for IgM or IgG.
Hard to tell if infection is current or past
How to test for Lyme Disease
1.ELISA
2. Western blot or second ELISA
How long does tick need to be on person to consider treatment
Between 36 and 72 hours
Give doxycyclin
Lyme disease treatment
1.Doxycycline
2. Amoxicillin
3. Cefuroxime
Rickettsia rickettsii
Rockymountain spotted fever
G-
Intracellular
Rocky Mountain Wood tick and American dog tick
Rocky Mountain spotted fever Epidemiology
Lots in TN.
Length of tick attachment increases risk of transmission.
Most common and severe rickettsial disease