Exam 3 - Cloning Flashcards

1
Q

What is the “rejection problem” with stem cells and how can we get around it?

A

transplanted stem cells may cause immune rejection, so patients would have to take immunosuppressive drugs which present their own dangers

therapeutic cloning would create embryonic stem cells that are genetically identical to the patient

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2
Q

What is the difference between reproductive and therapeutic cloning?

A

reproductive: tech used to generate an individual who has the same nuclear DNA as another existing individual

therapeutic: generation of human embryos for use in research to harvest stem cells that can be used to study human development and treat diseases

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3
Q

What is SCNT?

A

somatic cell nuclear transfer

a secondary M2 oocyte (1n, 2 chromatids per chromosome) is enucleated

a diploid somatic cell (2n) has its nuclear information transferred into the enucleated oocyte using electrical fusion, the first polar body is either removed or degenerates

can be developed into a day 5 embryo for transfer to the uterus which may result in pregnancy

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4
Q

Why might a clone using SCNT not be completely identical?

A

mitochondria contain their own DNA and are only passed on by the mother, so some of the genetic material comes from whichever organism provided the oocyte

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5
Q

How many protein coding genes are in the mitochondrial DNA vs the nuclear DNA?

A

13 in the mito DNA,
23,000 in the nuclear DNA

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6
Q

What can be caused by mutations in mitochondrial DNA?

A

neurological, muscle, and heart problems
deafness
type 2 diabetes

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7
Q

If a male has a mitochondrial disease, who will he pass that disease to?

A

nobody

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8
Q

How can we prevent the transmission of mitochondrial diseases? Is it considered cloning?

A

mitochondrial replacement

not cloning because a sperm still fertilizes an egg

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9
Q

What is mitochondrial replacement? What is the process and what does it accomplish in the end?

A

donor oocyte is enucleated
spindle chromosomes are removed from the intended mother oocyte and injected into the donor oocyte with viral fusion
sperm is injected into the oocyte causing fertilization
blastocyst develops and embryo is implanted into the intended mother

end up with genetic contribution from 3 parents: intended mother with a mitochondrial disease contributes 23 chromosomes of nuclear DNA, intended father contributes 23 chromosomes of nuclear DNA, and a female egg donor contributes normal mitochondria

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10
Q

Who was the Dr. who did mitochondrial replacement, when, and what did it accomplish?

A

Dr. John Zhang, 2016, baby born free of Leigh syndrome

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11
Q

Where does the nuclear DNA come from in cloning vs. mitochondrial replacement?

A

cloning - from a single somatic cell of an individual
mitochondrial replacement - from an oocyte and a sperm of two individuals

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12
Q

What is gene therapy?

A

treat or prevent diseases by…
- replacing mutated genes that cause a disease with a healthy copy
- inactivating a mutated gene
- introducing new genes to help fight a disease

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13
Q

What is cell therapy?

A

cellular material is injected into a diseased patient

healthy cells integrate into the site of injury, replacing damaged tissue and facilitating improved function of an organ or tissue

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14
Q

How can therapeutic cloning and gene therapy be used to treat a genetic disease?

A
  • somatic cells are taken from a patient with a genetic mutation
  • somatic cell nuclear transfer into a enucleated donor oocyte
  • embryonic stem cells from the ICM are isolated
  • gene therapy (repair the mutation, giving us cells with the normal gene)
  • cells are differentiated into the needed cell
  • cell therapy (healthy cells are injected into the patient)
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15
Q

What types of cells can be targeted for gene therapy? What results will it cause?

A

somatic cells - adult stem cells, only treats the disease in the affected individual

germline - targets zygotes or gametes, modifies all cells in a new organism including the sperm or eggs so that the offspring and all of the future generations are treated (but not the affected person)

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16
Q

What Dr. has done germline gene editing? What did that doctor do?

A

Dr. He Jianjui removed the CCR5 gene from embryos created from the sperm of an HIV+ man so that the offspring would be HIV-resistant. However, this increases the risk of West Nile and Influenza.

17
Q

Is mitochondrial replacement a form of germline gene editing?

A

Yes (but not really if the offspring is male, because his offspring won’t get his mitochondria anyway)

18
Q

Who was Dolly? Who was able to produce Dolly?

A

Ian Wilmut and his colleagues produced Dolly in Scotland
She was the first cloned mammal, derived from a mammary gland cell
One of 276 attempts
Produced several of her own offspring through normal sexual means

19
Q

Scientifically, how was Dolly produced? What organisms/cells were involved?

A

a white faced sheep contributed a mammary gland cell
a black faced ewe was the egg donor who contributed a M2 oocyte
another black faced ewe was the gestational carrier of the embryo
dolly (a white faced sheep) was born

20
Q

What did Dolly teach us?

A

Genes in specialized mammal cells remain intact and amenable to rebooting
- genes that are turned off by regulatory proteins are 1) not existed from the genome, 2) often involve DNA methylation, modification of histone proteins, and non-coding RNA

21
Q

What is nuclear reprogramming? What part of cloning is a form of nuclear reprogramming?

A

change in gene expression of a specialized cell to that of an undifferentiated cell

SCNT is a form of nuclear reprogramming

aka, differentiation is not a “one way” process

22
Q

How is the gene expression in a specialized cell controlled?

A

regulatory proteins are different in each type of somatic cell

those proteins can program (or reprogram) the somatic nuclear DNA of a somatic cell to act like nuclear DNA of an undifferentiated cell

23
Q

In SCNT, how is the DNA reprogrammed?

A

the oocyte instructs differentiated adult cell nuclear DNA to revert to the undifferentiated state of DNA

24
Q

What is epigenetics?

A

the study of changes in phenotype or gene expression that are caused by factors other than the underlying DNA sequence

aka, modifications are made to the genome that affect gene expression but not the DNA sequence, such as the order in which genes are turned on and off

25
Q

Who was Second Chance?

A

Ralph Fisher’s clone of his bull Chance, the somatic cell donor.
Born in 1999 at Texas A&M

26
Q

What did Chance and Second Chance demonstrate?

A

Chance was very gentle, but on Second Chance’s 4th birthday he attacked and wounded Ralph Fisher

Showed that factors other than nuclear DNA influence phenotype (genetics were exactly the same, but behavior was very different)

27
Q

Who was CC?

A

CopyCat, first cloned pet, born in 2001 at Texas A&M
Only surviving animal from 87 kitten embryos
Funded by John Sperling

28
Q

What did CC and her somatic cell donor demonstrate?

A

CC’s coat pattern was not the same as the somatic cell donor’s coat pattern, showing that factors other than nuclear DNA influence the phenotype

29
Q

Explain the genetic reason that CC was different than her somatic cell donor?

A

Barr body formation - female cells normally have two X chromosomes, one is turned off (and condensed into a Barr body) in each cell. All of the cells derived from that cell will have the same X chromosome expressed.
Therefore, during embryonic development, you get patches of cells with a certain X chromosome expressed or condensed/shut off.

Female calico/tortoiseshell cats are heterozygous for coat color, X orange and X black.
White fur color comes from an unrelated gene
Other fur ends up in patches of orange and black depending on what X chromosome was condensed into a Barr body.

30
Q

What are the pros, cons, and practical concerns of cloning endangered and extinct species?

A

pros:
- preserve and propagate species that reproduce poorly in zoos until their habitat can be restored and species can be reintroduced into the wild

cons:
- narrow gene pool can make species more susceptible to disease or genetic defects

practical concerns:
- what species will be the gestational carrier?
- what species will provide the oocyte?

31
Q

How was the endangered Gaur cloned (gestational carrier and egg donor)?

A

cow gestational carrier and egg donor