Exam 2 Flashcards
What makes one organic carbon chain different from another?
functional groups
DNA codes for 25,000 different what?
Proteins
What are we as humans, predominantly composed of?
Proteins
By adding a functional group, a larger molecule can then take on a different property like polarity.
True or False
True
What does -myo mean?
muscle
Is heat a catalyst?
yes
What does -globin at the end of a word imply?
it’s a protein structure
Name the monomers of these Organic groups
- Carbohydrates- ______________
- Lipids- ________ and _____ _____
- Proteins- _____ _____
- Nucleic Acids- ___________
Carbohydrates- monosaccharides
Lipids- glycerol and fatty acids
Proteins- amino acids
Nucleic Acids- nucleotides
What do you add to a Nucleoside structure to make it a Nucleotide?
Phosphate group
What three things have to be included for a structure to be a nucleotide?
Pentose sugar + Nitrogen Base + Phosphate group
DNA and RNA have a “backbone” composed of two things, what are they?
Sugar Phosphate Backbone
How many different Bases are there total that could be used in a Nucleotide structure?
(Hint: 4 are found in DNA, 4 are found in RNA)
5 total
Is a Pyrimidine base a single ring or a double ring?
single ring
Is a Purine base a single ring or a double ring?
double ring
Name the RNA bases
- Adenine
- Uracil
- Cytosine
- Guanine
Name the DNA bases
- Adenine
- Thymine
- Cytosine
- Guanine
How many places does Cytosine need to bond with?
3
How many places does Adenine need to bond with?
2
Which two bases of the Nucleic Acids have double rings?
Adenine and Guanine
Hint: the two bases spelt with double n’s are the two that have double rings
What is the Carbon ( C ) in the middle of a protein structure sometimes called?
Alpha Carbon
Amino Acids are linked in condensation (dehydration synthesis) reactions to form what type of bonds?
Peptide Linkages or Peptide Bonds
What is the name for short polymers of 20 or fewer amino acids? (Not a true protein)
Oligopeptides or peptides
Both the alpha helix and the beta pleated sheets are created by ________ _____.
Hydrogen Bonds
Alpha helix and beta pleated sheets are part of which structure of a protein? The primary structure, the secondary structure, the tertiary structure, or the quaternary structure?
secondary structure
At which structure level is the protein finally functional?
hint: it’s functional when it folds
tertiary structure
DNA and RNA have what kind of “backbone”
a Sugar/Phosphate backbone
The sides of a DNA strand and/or an RNA strand are made from a sugar and a phosphate repeatedly bonded together with what type of Bond?
a Covalent Bond
The middle rungs of DNA are composed of what?
bases
What do we call a covalent bond between two sugars?
a glycosidic linkage
A pyrimidine base and a purine base must always pair up.
true or false
true
What kind of bonds do the bases in the middle of a DNA ladder have?
Hydrogen Bonds
When Cytosine and Guanine come together, they can form how many hydrogen bonds?
3
When Adenine and Thymine come together they can form how many hydrogen bonds?
2
Base pairs are linked by what type of bonds?
Hydrogen Bonds
Base pairs can be separated with only a small amount of energy.
True or false
true
How many polynucleotide strands does DNA have?
2
What do Storage Proteins store?
Amino Acids
Collagen is what type of protein?
A Structural Protein
Hemoglobin is a transport protein and it carries ______
oxygen
What types of Proteins have the “on/off switch” for gene expression?
Genetic Regulatory proteins
What type of proteins are responsible for physical stability and movement?
Structural Proteins
Where are the receptor proteins always found on a cell?
on the surface of the cell
outer cell membrane surface
R Groups are only associated with _____ _____
Amino Acids
R Groups are a functional group.
True or False
True
a functional group found on only Amino Acids
How many different R Groups are there?
20
R Groups are responsible for the different properties of Amino Acids.
True or False
true
What makes Cysteine (a special case amino acid) different from the other Amino acids structurally?
It has a Sulfhydryl group (-SH) in it’s R group
When you put Amino Acids together, they are built by what reaction?
Condensation Reaction, Dehydration Synthesis
When the dehydration synthesis occurs to build amino acids, the H2O is removed and the Carbon (C-) links directly with what?
Nitrogen (-N)
When building Amino Acids, the H2O is removed and allows the Carbon to link directly with Nitrogen. When this happens, what kind of bond is formed?
Peptide Bond or a Peptide Linkage
What is another name for a Protein
a Polypeptide
What kind of bond is a Cysteine side bond?
Covalent Bond between 2 sulfhydryl groups
Which amino acid is found in the protein our hair is made up of called Keratin?
Cysteine
When you break the disulfide bridges found in hair by burning it, what does it smell like?
Sulfur
If the protein cannot maintain it’s shape, what will happen?
What will it lose?
it will lose functionality
What do Ionic Interactions form within a protein?
Salt Bridges
What happens when strong denaturing occurs in a protein?
- destroys the secondary and tertiary structure
* the protein loses it’s function permanently
What happens when gentle denaturing occurs in a protein?
*a protein can return to normal when returned to it’s normal conditions
All of the information needed to specify the unique shape of a certain protein is contained where?
In the primary structure
Does heat speed up or slow down metabolic reactions?
Speed up
Name all four things that can denature a protein
1) Temperature (increase only)
2) Concentration of H+ ( change of pH)
3) High concentration of Polar substances
4) Non-polar substances
(extra: electrical burn)
define optimal temperature
The temperature needed for enzymes and proteins to live and produce there
What is the pH of the protein enzymes in your stomach?
pH 2
What is the pH of the protein enzymes in your mouth?
pH 7
Does freezing denature a protein?
No, freezing preserves
hint: freezing fresh meat, cooking later
How many Kingdoms did the very first Kingdom Classification System have based on macroscopic view only? What were they?
2 kingdoms
- Plantae
- Animalia
Fungi was once considered a plant. They later realized that Fungi needed it’s own Kingdom Classification because Fungi couldn’t do what one thing that plants can do?
photosynthesis
What were the 3 Kingdoms, when it was based on macroscopic view and physiology only?
- Fungi
- Plantae
- Animalia
Name all 5 of the original Kingdoms based on macroscopic, microscopic, and physiology.
- Monera
- Protista
- Fungi
- Plantae
- Animalia
Which of the five original Kingdoms is all prokaryotes?
Monera
define archea
*ancient bacteria, archaic
can live in extreme environments
define unicellular
single-celled
Name the three organisms found in the Monera group that we talked about in class.
- bacteria
- archaea
- cyanobacteria
What was the very first organism on Earth to produce Oxygen before plants?
cyanobacteria
Cyanobacteria was originally thought to be algae until they found out it was missing an essential part to be catergorized as a plant. What was it missing
a nucleus
Name a true multi-cellular organism
Humans
What’s the difference between a multi-cellular organism and a unicellular organism that can form multi-cellular colonies?
A unicellular organism that can form multi-cellular colonies also has the ability to break off from the colony and function as a single cell. If a single cell broke off of a true multi-cellular organism, it would not be able to function on it’s own.
Which Kingdom group is an Amoeba found in?
Protista
Many Protozoans (single-celled in Protista group) move around by using appendages known as what?
Flagella or cilia
Are most of the organisms in the Protista kingdom visible macroscopically or microscopically?
Microscope needed to see most of the Protista Kingdom group
What is another name for an Early Biologist?
Naturalist
Is Fungi a Eukaryote or a Prokaryote?
Eukaryote
Is Fungi multi-cellular or unicellular?
unicellular (single-celled)
Organisms in the Plantae group are Prokaryotes and multicellular.
True or False
False. They are Eukaryotes and multicellular
Some animals in the Animalia group are still so small they can’t be seen without a microscope, yet they are all multicellular.
True or False
True
Better microscopes and DNA analysis lead to a new classification system, what is it called?
Domain Classification System
What did the Domain Classification system do to the Kingdom Monera?
Put it into two separate domains, Archaea and Bacteria
Can ancient bacteria (archaea) make you sick like bacteria can?
No, Archaea could never live in you and could never make you sick
What are the three sections in the Domain classification system?
- Archaea
- Bacteria
- Eukaryotes
they separted them into these domains because this is the best way to look at their distinct differences at cellular level
What does cyto- mean?
cell
What are the 4 basic features of all Cells (what prokaryotic and eukaryotic cells have in common)?
- Plasma membrane
- Cytosol
- Chromosomes
- Ribosomes
What do Chromosomes do?
carry genes
What do ribosomes do?
make proteins
How often can a bacteria cell divide/reproduce?
every 20 minutes
Is a bacteria cell large and complex or simple and basic?
simple and basic
What are prokaryotes designed to do?
make more/reproduce
What shape is a prokaryote?
rod-shaped
Prokaryotes have no organelles and no _______
nucleus
What is the cell membrane responsible for?
entry and exit of the cell
allows in nutrients, lets out waste
DNA holds the recipe, RNA _____ the recipe
reads
A cell must arise from a pre-existing cell (a parent cell)
True or false
True
Are Archaea and Bacteria eukaryotes or prokaryotes?
Prokaryotes
Which kingdom is the first level to have multicellular organisms?
Plantae
Where is most of our DNA located in the cell?
in the Nucleus
Do Mitochondria and Chloroplast both have DNA?
yes
Animals have Eukaryotic DNA, what type of DNA do plants have?
prokaryotic DNA
Our DNA is a linear strand in pairs. What does a plants DNA look like?
A single circular strand of the double helix
What is known as the “suicide sack”, and why would it be bad for it to burst?
- lysosomes
- because they are filled with powerful digestive enzymes that would break down and destroy the cell if they burst open within the cell
What is the job of the Nuclear pore?
to let out big things (large macromolecules) like RNA
DNA wrapped around histone proteins makes what?
Chromatin
What does the Nucleolus produce?
Ribosomes
The shape of the nucleus is maintained by the _______ ______, which is composed of protein.
nuclear lamina
What does -lamina mean?
base structure
What does it mean for something to be amphipathic?
being both hydrophobic and hydrophilic
What is a semipermeable membrane?
a membrane that will allow only certain molecules or ions to pass through it by diffusion (not all though)
What is the name of the discrete units that DNA is organized into?
Chromosomes
What part of the cell consists of flattened membranous sacs called cisternae?
Golgi Apparatus
Desmosomes are one of the four types of intercellular junctions we discussed. What does it do?
allow for flexibility (pulling your cheek)