Exam 2 Flashcards

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1
Q

Select any 1 of the animal viruses that we focused on that can establish latent infection in humans. Identify and describe the disease caused by the virus you selected. Include: the features of the acute infections on the host caused by the virus, explain how the latent infection is established, and the impact on the host including what happens if the virus is reactivated and exits the latent state

A

Herpes Varicella Zoster (HVZ)
• Initially causes acute infection resulting in the disease known as chicken pox. Characteristics of chicken pox includes itchy skin blisters, fever, upset stomach, headache, etc.
• Latent infection usually occurs prior to vaccines, but the viral DNA integrates into the genome of the host chromosome.
• Some things that cause reactivation of this virus includes hormonal fluctuations, waning immunity, emotional stress, etc. The acute infection that results from the reactivation of the virus is known as shingles. Some symptoms are a painful rash and neuropathy at epithelial sites adjacent to the cells that the virus integrated into

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2
Q

Antigenic drift in influenza virus involves which of the following?

A. Loss of the viral envelop which permits the virus to hide from host defenses
B. Co-infection of a host by 2 or more different influenza viruses (e.g. One originally infecting birds and one originally infecting humans) resulting in a viral gene reassortment that generates a new viral subtype
C. The elimination of a particular influenza strain because of aggressive immunization
D. Integration of influenza proviral DNA into the genome of the infected host cell resulting in a latent infection
E. Small mutations in the hemagglutinin and neurominidase genes of influenza that accumulate to generate new viral strains

A

E

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3
Q

Which of the following is a virus that belongs to a phylogenetic family whose members include viruses that cause the common cold?

  • Rotavirus
  • Hepatitis B virus
  • HIV
  • Herpes Simplex virus (HSV)
  • SARS-CoV-2
A

SARS-CoV-2

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4
Q

Which viruses can potentially cause cancer?

A.	All animal viruses
B.	All bacteriophages
C.	Any animal virus with an RNA genome
D.	Those animal viruses whose genomes (or proviral form) can integrate into the genome of the infected host cell
E.	Any animal virus with a DNA genome
A

D

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5
Q

Which of the viruses listed below have genomes that serve directly as mRNA so that some viral proteins are made almost immediately after the viral genome is released into the cytoplasm of the infected host cell?

  • Herpes varicella (HVZ) virus (a double-stranded DNA virus)
  • Poliovirus (a plus-stranded RNA virus)
  • Hepatitis B virus (HBV, a reverse-transcribing DNA virus
  • Influenza virus (a minus-strand RNA)
A

Poliovirus (a plus-stranded RNA virus)

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6
Q

Which of the following systems uses all the characteristics listed below to classify viruses?
• Form of the viral genome
• Process used to make viral mRNA

A. The International Committee on Viral Taxonomy (ICTV)
B. The Baltimore System
C. Both the Baltimore System and the ICTV

A

B

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7
Q

Human immunodeficiency virus (HIV) is a retrovirus. Organize the enzymes/enzymatic reactions involved in the replication of this virus’ genome into the proper chronological order

A. The proviral DNA integrates into the genome of the infected host cell
B. Viral reverse transcriptase functions as a DNA-dependent DNA polymerase generating a double-stranded DNA molecule
C. Viral reverse transcriptase functions as an RNA-dependent, DNA polymerase to generate a -DNA/+RNA hybrid molecule
D. Host RNA polymerases (a DNA-dependent RNA polymerase) is used to synthesize viral +RNA
E. Viral reverse transcriptase uses its RNase H activity to degrade viral+ RNA

A

C, E, B, A, D

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8
Q

Viruses that infect bacterial cells cannot infect animal cells

  • True
  • False
A

True

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9
Q

Enveloped viruses whose envelopes become removed by a disinfectant or detergent are no longer infectious

  • True
  • False
A

True

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10
Q

Like bacteria, most viruses can be grown in the laboratory by directly inoculating them on/into a general-purpose medium like tryptic soy agar (TSA) or nutrient broth

  • True
  • False
A

False

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11
Q

Which of the following most accurately describes the role of viral integrase (encoded by the viral int gene) when E. coli is infected by temperate phage lambda? Integrase is….

A. A viral polymerase needed for replication of the double-stranded DNA genome of phage lambda
B. A regulatory protein that will bind to the operator region adjacent to the cro gene blocking transcription of the cro which in turn prevents entry into the lytic cycle
C. A viral protease that will degrade the viral cro protein thereby preventing entry into the lytic cycle
D. A viral nuclease that will cut the E. coli chromosome permitting the viral DNA to integrate and establish lysogeny

A

D

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12
Q

Which of the following is the early viral protein whose function is to enhance the transcription of genes necessary for entry into the lytic cycle following infection of E. coli by temperature phage lambda?

  • Cro protein
  • Integrate
  • cIII protetin
  • cII protein
  • Lambda repressor
A

Cro protein

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13
Q

In a naked virus this is the structure/component that is most likely to be directly involved in adsorption

  • RNA
  • Viral polymerase
  • DNA
  • Envelope
  • Capsid
A

Capsid

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14
Q

Exocytosis and budding are mechanisms that might occur during which of the stages of viral replication listed below?

  • Assembly
  • Release
  • Adsorption
  • Penetration
  • Synthesis
A

Release

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15
Q

When bacteriophages infect bacterial cells and complete the steps of synthesis and assembly, how are the assembled viral particles released from the infected host cells?

  • Lysis of the host cell
  • Exocytosis
  • Budding through the host cell’s membrane
  • Any of the above mechanisms might be used depending on the type of bacteriophage
A

Lysis of the host cell

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16
Q

Which of the following play a role in the replication of rotavirus (a double-stranded RNA virus)?

  • Viral reverse transcriptase
  • Host cell DNA polymerase
  • Viral RNA-dependent, RNA-polymerase (RdRP)
  • Host cell RNA polymerases
A

Viral RNA-dependent, RNA-polymerase (RdRP)

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17
Q

Explain what antigenic shift is, how or why it can occur in influenza virus as opposed to the other viruses we studied, and what the role antigenic shift plays in causing infections and disease

A

Antigenic shift is small changes that occur over time to create a new strain of the virus. These small changes or mutations result from errors made by RNA-dependent RNA-polymerase during replication. If a virus can undergo these small constant changes over time, they can allow for infection since the hosts will not have any prior immunity

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18
Q

Strains of the bacteria Salmonella harboring a temperate phage acquires the ability to modify their LPS because the phage changes the activity of the bacterial enzymes involved in LPS synthesis. This helps Salmonella evade the adaptive immune response in animal hosts. The impact of the phage on the phenotype of Salmonella harboring this phage is an example of…

  • Lysogenic conversion
  • Lysogeny
  • Transformation
  • Viral induction
  • A virulent phage
A

Lysogenic conversion

19
Q

Lysis of the infected host cell is always the outcome of a successful infection by these viruses

Virulent phages, onlyHep
• Temperate phages, only
• Both temperate and virulent phages

A

Virulent phages, only

20
Q

Which of the following are directly involved in prion replication?

A.	Prion interaction with normal proteins in the cell
B.	Prion RNA polymerase
C.	Host cell RNA polymerase
D.	Prion DNA polymerase 
E.	Host cell DNA polymerase
A

A

21
Q

What is the disease for the causative agent of Creutzfeldt-Jakob Disease (CJD) or subacute spongiform encephalopathy?

  • Hepatitis B virus (HBV)
  • Herpes simplex virus (HSV)
  • Herpes varicella zoster (HVZ)
  • HIV
  • Influenza virus
  • Poliovirus
  • Prions
  • Rotavirus
  • SARS-CoV-2
A

Prions

22
Q

What is the disease for the causative agent of diarrhea, especially severe in infants and small children?

  • Hepatitis B virus (HBV)
  • Herpes simplex virus (HSV)
  • Herpes varicella zoster (HVZ)
  • HIV
  • Influenza virus
  • Poliovirus
  • Prions
  • Rotavirus
  • SARS-CoV-2
A

Rotavirus

23
Q

What is the disease for the causative agent of shingles?

  • Hepatitis B virus (HBV)
  • Herpes simplex virus (HSV)
  • Herpes varicella zoster (HVZ)
  • HIV
  • Influenza virus
  • Poliovirus
  • Prions
  • Rotavirus
  • SARS-CoV-2
A

Herpes varicella zoster (HVZ)

24
Q

What is the disease for the causative agent of acquired immune deficiency syndrome?

  • Hepatitis B virus (HBV)
  • Herpes simplex virus (HSV)
  • Herpes varicella zoster (HVZ)
  • HIV
  • Influenza virus
  • Poliovirus
  • Prions
  • Rotavirus
  • SARS-CoV-2
A

HIV

25
Q

What is the disease for the causative agent of liver cancer?

  • Hepatitis B virus (HBV)
  • Herpes simplex virus (HSV)
  • Herpes varicella zoster (HVZ)
  • HIV
  • Influenza virus
  • Poliovirus
  • Prions
  • Rotavirus
  • SARS-CoV-2
A

Hepatitis B virus (HBV)

26
Q

What is the disease for the causative agent of COVID-19?

  • Hepatitis B virus (HBV)
  • Herpes simplex virus (HSV)
  • Herpes varicella zoster (HVZ)
  • HIV
  • Influenza virus
  • Poliovirus
  • Prions
  • Rotavirus
  • SARS-CoV-2
A

SARS-CoV-2

27
Q

What is the disease for the causative agent of chicken pox?

  • Hepatitis B virus (HBV)
  • Herpes simplex virus (HSV)
  • Herpes varicella zoster (HVZ)
  • HIV
  • Influenza virus
  • Poliovirus
  • Prions
  • Rotavirus
  • SARS-CoV-2
A

Herpes varicella zoster (HVZ)

28
Q

Replication of which of the viruses below involves the production of a replication form that is double-stranded DNA molecule?

A. Poliovirus (a plus-stranded RNA virus)
B. Herpes varicella zoster virus (HVZ) (a double-stranded DNA virus)
C. Rotavirus (A double-stranded RNA virus)
D. HIV (a retrovirus)
E. Influenza virus (A minus-stranded RNA virus)

A

D

29
Q

Temperate phage lambda infects E. coli under conditions where nutrients are very limited, and the bacteria are running out of space. The bacteria are alive but engaging in very little metabolic activity. Under these circumstances, what is the most likely outcome of the infection?

  • Entry into the lytic cycle
  • Establishment of lysogeny
A

Establishment of lysogeny

30
Q

Temperate phage lambda initiates an infection in a population of E. coli bacteria that are present in an environment where conditions are optimal for bacterial cell growth. Which of the following correctly identifies the sequence of events that are most likely to occur in the situation?

A. 1) E. coli proteases are present

2) Viral cII protein is degraded by the proteases
3) Transcription of cI gene is enhanced
4) Viral lambda repressor protein accumulates and blocks the transcription of the genes necessary for entry into the lytic cycle
5) Lysogeny is established as a result

B. 1) E. coli proteases are present

2) Viral cII protein is degraded by the proteases
3) Nothing interferes with transcription of the cro gene
4) Viral Cro protein accumulates
5) The lytic cycle is initiated as a result

C. 1) E. coli proteases are absent

2) Viral cII protein can accumulate
3) cII protein enhances transcription of the cro gene
4) Viral Cro protein accumulates
5) The lytic cycle is initiated as a result

D. 1) E. coli proteases are absent

2) Viral cII protein can accumulate
3) cII protein enhances transcription of the cro gene
4) Viral cro protein accumulates
5) The lytic cycle is initiated as a result

A

B

31
Q

Which of the following play a direct role in the replication of human immunodeficiency virus (HIV) (a retrovirus)?

A. Viral reverse transcriptase
B. Host cell DNA polymerase
C. Viral RNA-dependent, RNA polymerase (RdRP)
D. Host cell RNA polymerase)

A

A, D

32
Q

Which of the following descriptors apply to viruses?

A. Prokaryotic
B. Acellular
C. Eukaryotic
D. Obligate intracellular parasite

A

B, D

33
Q

This virus structure is typically derived from one of the membranes (e.g. nuclear, cytoplasmic, endoplasmic reticular) of the infected host cell

  • Protease
  • Nucelocapsid
  • Envelope
  • Capsid
  • Polymerase
A

Envelope

34
Q

Promoters and capsomers are the building blocks that make up which of the viral structures/components?

  • Genomes
  • Spikes
  • Capsids
  • Envelopes
A

Capsids

35
Q

A virion is, by definition, a/an….

  • Mature, infectious viral particle
  • Virus that always causes lysis of the infected host cell
  • Virus that can transform into the host cell it infects
  • Virus that can establish a latent phase
A

Mature, infectious viral particle

36
Q

What are prions?

  • Infectious protein particles
  • Subviral particles that can only replicate when an independent helper virus is present in the host cells that they infect
  • Infectious RNA that does not encode any proteins and is not translated
  • A type of virus
A

Infectious protein particles

37
Q

The term prophage refers to a…

A. Temperate phage whose genome has integrated into the genome of a bacterial host cell
B. Fully assembled viral particle
C. Bacterial cell that is harboring a temperate phage that has establish lysogeny
D. Virulent or temperate phage that has not yet infected a bacterial host cell but could potentially do so
E. Bacterial cell that is infected with a temperate phage that is engaging in the lytic cycle

A

A

38
Q

During viral replication, transcription of early genes of this virus occurs within the nucleocapsid using a viral polymerase brought along by the virus. The newly synthesized mRNA is transported out of the nucleocapsid into the cytoplasm where translation occurs using host ribosomes. The newly formed viral proteins cluster together inside the host cell to form an inclusion called a viroplasm that can be seen when infected cells are observed microscopically.

A. Influenza virus (a minus-strand RNA virus)
B. Hepatitis B virus (HBV) (A reverse-transcribing DNA virus)
C. Rotavirus (a double-stranded RNA virus)
D. SARS-CoV-2 (a plus-strand RNA virus)
E. Herpes simplex virus (HSV) (A double-stranded DNA virus)

A

C

39
Q

Replication of this virus’ genome occurs via a mechanism described as rolling-circle replication using host polymerases. This type of nucleic acid replication generates a concatemer which is a long, continuous nucleic acid molecule made up of numerous copies of the viral genome. Prior to assembly of new viral particles, this concatemer is processed (i.e. cut) to generate individual copies of the viral genome

A. Hepatitis B virus (HBV) (a reverse-transcribing DNA virus)
B. Human immunodeficiency virus (HIV) (a retrovirus)
C. Herpes simplex virus (HSV) (a double-stranded DNA virus)
D. Influenza virus (a minus-strand RNA virus)
E. Poliovirus (a plus-stranded RNA virus)

A

C

40
Q

What is the route of transmission of influenza virus?

A. Oral/feal route (ingestion of viruses that have come from the intestines of a previous host)
B. Sexual transmission (virus exposure through contact with semen or vaginal fluid) and blood-borne (contact with contaminated blood)
C. Airborne (inhalation of virus-containing droplets or aerosols)

A

C

41
Q

What is the route of transmission of HIV?

A. Oral/feal route (ingestion of viruses that have come from the intestines of a previous host)
B. Sexual transmission (virus exposure through contact with semen or vaginal fluid) and blood-borne (contact with contaminated blood)
C. Airborne (inhalation of virus-containing droplets or aerosols)

A

B

42
Q

What is the route of transmission of SARS-CoV-2?

A. Oral/feal route (ingestion of viruses that have come from the intestines of a previous host)
B. Sexual transmission (virus exposure through contact with semen or vaginal fluid) and blood-borne (contact with contaminated blood)
C. Airborne (inhalation of virus-containing droplets or aerosols)

A

C

43
Q

What is the route of transmission of Poliovirus?

A. Oral/feal route (ingestion of viruses that have come from the intestines of a previous host)
B. Sexual transmission (virus exposure through contact with semen or vaginal fluid) and blood-borne (contact with contaminated blood)
C. Airborne (inhalation of virus-containing droplets or aerosols)

A

A

44
Q

What is the route of transmission of Hepatitis B Virus (HBV)?

A. Oral/feal route (ingestion of viruses that have come from the intestines of a previous host)
B. Sexual transmission (virus exposure through contact with semen or vaginal fluid) and blood-borne (contact with contaminated blood)
C. Airborne (inhalation of virus-containing droplets or aerosols)

A

B