Epigenetics Flashcards

1
Q

topics under current investigation:

A
  • short term memory (sec-hrs)
  • long term memory (decades)
  • trauma
  • children’s aggression
  • drug addiction
  • depression
  • suicide
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

who attends conferences on epigenetics & behavior?

A
  • anthropologists
  • geneticists
  • neuroscientists
  • molecular bioligists
  • psychiatrists
  • psychologists
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

what is epigenetics? (old definition)

A

-heritable changes in a phenotype in the absence of alterations of the DNA sequence

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

new definition of epigenetics:

A

-any lasting change in gene expression mediated by alteration in chromatin structure

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

chromatin=

A

-DNA plus proteins

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

what is gene expression?

A
  • transcription of DNA code in RNA by RNA polymerase (mRNA, tRNA, rRNA, microRNA)
  • translation of mRNA into proteins
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what controls gene expression?

A
  • proteins can change the shape of the DNA, making some regions of DNA available for transcription and some unavailable
  • histones, non-histone proteins & transcription factors
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

what are histones?

A
  • proteins that DNA is wrapped around.

- they can make DNA available or unavailable for transcription

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

what are transcription factors?

A

-proteins that can bind to DNA at promoter and enhancer sites (noncoding DNA regions) and alter the shape of DNA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

alteration of gene expression causes=

A

-cell differentiation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what regulates transcription factors activity?

A
  • many primary messenger molecules such as: NP, hormones & cytokines, regulate gene transcription
  • some, such as steroid hormones bind directly to transcription regulating proteins (aka->hormone receptors) that bind to regions of DNA called hormone response elements
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

regulation of transcription factors thru phosphorylation:

A
  • other primary messengers regulate phosphorylation of transcription factors by activating protein kinases that phosphorylate the transcription factors
  • i.e. regulation of gene expression by cyclic AMP
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

regulation of phosphorylation by receptors with tyrosine kinase activity:

A

-many growth factors as well as insulin influence cells this way

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

the roles of non-coding DNA:

A
  • noncoding DNA=DNA that is not transcribed to RNA=90% of human genome
  • sites for the binding of transcription factors
  • after binding transcription factors, the DNA can fold or unfold in various ways that influence the availability of a coding region of DNA for transcription to RNA
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

mutations of noncoding DNA regions can lead to disease without a mutation of a known gene:

A
  • noncoding DNA mutations have been found that increase a person’s risk for developing:
  • coronary artery disease
  • cancer: prostate, colorectal
  • extra fingers & toes
  • excessive inflammation
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

changes in gene expression: inactivation

A
  • methylation (CH3) of histone tails and/or sequences of DNA can change the physical relationship b/w the DNA & histone
  • methylation can “silence” a gene making the gene unavailable for transcription to RNA
  • methylation of DNA permanently silences a gene but methylation of histone is reversible
17
Q

changes in gene expression:

activating marks

A
  • methylation
  • acetylation
  • phosphorylation
  • histone remodeling complexes
18
Q

Enzymes that control epigenetic marks:

A
  • histone methyl transferase
  • histone demethylase
  • histone acetyl transferase
  • histone deacetylase
  • these enzymes are coded for by genes whose expression can be controlled by epigenetics
19
Q

epigenetics & cancer:

A
  • cancer cells can experience methylation of tumor suppressor genes making them unavailable for expression
  • microRNA’s can bind to complimentary regions of mRNA’s & prevent the mRNA from being translated into protein
  • hyper methylation of DNA that codes for micro RNA’s which bind to mRNA’s that code for factors that regulate growth
20
Q

epigenetics & the brain:

effects on memory=

A
  • methylation & demethylation occurs continually in the adult brain.
  • it effects formation & retention of memory
21
Q

changes in the brain due to childhood abuse:

A
  • more DNA methylation in genes for ribosomal RNA in the hippocampus
  • of 18 men who committed suicide after experiencing abuse as children
  • compared to 12 brains of men who died suddenly who had no record of childhood abuse
  • of brains of men who committed suicide who had not experienced childhood abuse
22
Q

methylation of immune T cell DNA associated with behavior:

A

-boys with high aggressive behavior had decreases cytokine blood levels & more mehtylation of genes coding for cytokines

23
Q

epigenetic events in addiction & depression:

A
  • observations in identical twins susceptibility or resistance to addiction and depression
  • 50% genetics; 50% life experience
24
Q

epigenetics changes can be caused by:

A
  • random environmental events during embryonic & fetal development
  • drug use-> epigenetic changes that activate cravings for addictive substances
  • chronic stress->feelings of defeat->decreased activation of reward center->depression