Enzymes Flashcards
salting out
when salt concentration becomes such that molecules become less soluble and will precipitate bc salt is more interested in interacting with itself
salting in
adding salt so that the molecules become more soluble, will reach a finite max point and then decrease and move into salting out
precipitation with organic solvents does what to proteins solubility?
reduces protein solubility because it reduces surface hydration ( the thin rim of moisture around a protein) and increases the hydrophobic surface which promotes aggregation just as salting out does
what is the principle effect of precipitation with organic solvents?
reduction of water activity
how do you ensure that the enzyme does not become deactivated when using solvent precipitation?
low temp
cations exchangers bind to ?
cations and then anions are eluted
anion exchangers bind to ?
anions, so cations are eluted
strong ion exchangers
shows no change in ion exchange capacity with changes in pH
stay stable’s in large pH range
weak ion exchangers
get ionized over a limited pH range. restrictive in the pH range, do not retain there charges well
example of weak ion exchanger?
carboxymethyl cellulose
example of a strong ion exchanger?
sulphuric acid
isoelectric focusing
the molecules migrate and then stop at the pH corresponding to the pI
methods to test that an enzyme is pure?
- homogeneity- one band in electrophoresis
- chromatographic behavior
- activity testing
- isoelectric testing
expand on chromatographic behaviour in testing for enzyme purity?
plot a graph with ABS on Y and fraction number on X
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glucose oxidase can oxidize glucose into
less sweet gluconic acid
sometimes referred to as desugaring agent
what reaction is used to remove O2 from reaction mixture?
glucose oxidase
transglutaminase is used for
forming isopeptide bond bc formed between the side chains and makes molecule bigger- food texture in imitation fish
lyases
act on double bonds, to break or create
ligases
smaller to bigger molecules
glue together
how is catalysis measured?
either through product formation or substrate dissaperence
initial rate method
take measurement as close to zero as possible
- at the start you expect the enzyme to be the most active (most potent), the substrate concentration is at max and there should be no product formed
end point method
take measurement after leaving reaction to proceed for an interval of time
- sub concentration is depleted, products would affect negative feedback inhibition
enzyme could lose activity over time