Enzyme Kinetics- Lectures 9-11 Flashcards

1
Q

What is a non-competitive inhibitor?

A

a compound that does not bind at the substrate binding site, so it cannot be displaced by increasing the concentrations of S

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2
Q

What is a competitive inhibitor?

A

a compound that binds at the substrate binding site due to its structural similarity that cannot be altered by the enzyme and competes for access to the site with the substrate; it can be overcome with greater [S}

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3
Q

What would a Lineweaver- Burk plot of a non-competitive inhibitor look like in comparison to a normal one?

A

Vmax would be reduced –> Y intercept would be higher

Km is unchanged –> X intercept (1/Km) would be the same

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4
Q

How would you calculate the extent of the change in Vmax when a non-competitive inhibitor is added?

A

Vmax’ = (Vmax) / [ 1 + ( [I] / Ki) ]

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5
Q

What would a Lineweaver-Burk plot of a competitive inhibitor look like in comparison to a normal one?

A

Vmax is unchanged –> Y intercept (1/Vmax) is unchanged

Km is increased –> X intercept moves to the R on the graph

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6
Q

What is an uncompetitive inhibitor?

A

a compound that binds an enzyme after its substrate is bound that stabilizes the enzyme/substrate complex and slows the dissociation of the substrate from the enzyme and production of product

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7
Q

What would a Lineweaver-Burk plot of an uncompetitive inhibitor look like in comparison to a normal one?

A

Vmax decreases –> Y intercept is higher

Km is decreased –> X intercept moves to the L

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8
Q

What is an irreversible inhibitor?

A

compounds that form a covalent and essentially irreversible bond with the enzyme, reducing the

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9
Q

What would a Lineweaver-Burk plot of an irreversible inhibitor look like in comparison to a normal one?

A

just like a non-competitive inhibitor:
Vmax would be reduced –> Y intercept would be higher
Km is unchanged –> X intercept (1/Km) would be the same

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10
Q

When is a reaction considered first order?

A

in the first (linear) region of a Michaelis-Menton plot where the initial rate is directly proportional to [S]

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11
Q

When is a reaction considered zero order?

A

in the second (exponential) region of a Michaelis-Menton plot where [S] is high and V0 becomes constant –> rate is independent of [S]

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12
Q

What are two reasons why one enzyme’s (Enzyme B) Vmax may be higher than another’s (Enzyme A) for the same substrate?

A

enzyme B may have more than one active site for this substance possibly on different subunits of a multimeric enzyme)
Enzyme B could operate more effectively using a single active site

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13
Q

What is the Michaelis-Menten equation?

A

Vmax [S]
V0= —————–
Km + [S]

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14
Q

What is the Lineweaver-Burke equation?

A

1 Km 1 1
—- = ———- x —- + —–
V0 Vmax [S] Vmax

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15
Q

What is IC50 and how is it calculated?

A

measure of an inhibitor’s potency; the inhibitor concentration that produces half of the maximal effect;

IC50 = Ki ( 1 + [S]/Km)

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16
Q

What is a homotropic modulator?

A

substrate that regulates enzyme function, either by changing the binding affinity at some other substrate site on same enzyme or by altering Vmax

17
Q

What is a zymogen (proenzyme)?

A

inactive precursor of an enzyme that contains the sequence of the active enzyme and must be cleaved from the enzyme by a previous product in the pathway to become activated

18
Q

What are isozymes?

A

multiple enzymes that can perform the same reaction

19
Q

What is the turnover number?

A

Vmax
kcat= ————
[Et]
Where [Et] is the molar quantity of enzyme present in a reaction

20
Q

What is the specificity constant?

A

the best indication of the efficiency of an enzyme under physiological conditions
= (kcat)/(Km)

21
Q

Are all enzymes proteins?

A

No- ribozymes