DNA Virus 1 Flashcards
key concepts of DNA viruses
- transcription and replication in nucleus (except pox)
- host RNA pol II transcribes mRNA (except pox)
- viral or hose DNA pol replicates genome
parvovirus
-BK virus
papova
warts
cancer
adeno
colds
keratitis
hepadna
hep B
herpes
cold sores, etc
pox
smallpox
DNA genomes
- small circular DNA
- ejected various ways into the nucleus-see slide
steps in DNA virus replication
- recognition
- attachment
- entry
- uncoating
- transcription of mRNA-Host RNA pol
- protein synthesis
- replication of the genome- host or viral DNA pol
- assembly of virions
- egress
use of host RNA pol for mRNA transcription
- DNA viruses use the host RNA pol
- RNA pol II and TF (x,y) recognize viral promoters
- X and Y are proteins that enhance viral transcription
TFs
- both cellular and viral factors regulate transcription by host RNA pol
- viral TFs are important virulence factors and are probably essential
- need cells to recognize viral TFs and promoters in order to transcribe them
genome synthesis-host DNA pol
- some virus genomes are recognized by the host DNA pol complex
- these viruses do not encode their own polymerase-small genomes
- parvovirus-adeno associated virus 2
- need to be in dividing cells
genome synthesis-viral DNA pol
- large DNA viruses encode their own pol and accessory proteins
- herpes, adeno
- don’t have to be in a replicating cell
origins of diversity in DNA viruses
- recombination between and within genomes
- DNA pol have higher fidelity than RDRP
- mutations about 1/ 1 mil- like us
- genetically more stable than RNA viruses
adenovirus diseases
- resp-bad cold/fever, pharyngoconjunctival fever, laryngitis and cough, pneumonia
- other sites-acute hemorrhagic cystitis, epidemic keratoconjunctivitis, gastroenteritis
adeno epidemeology
- aerosol, fecal oral, objects
- poorly chlorinated pools
- children
- military recruits
- daycare centers, swimming clubs, boot camp
adenovirus life cycle
- adeno fiber protein binds to cell receptor
- entry by endo
- endosome acidification causes fibers to lyse the vesicle
- capsid traffics to nucleus and DNA genome uncoats through nuclear pore
- genome replicates in nucleus
- host RNA pol II makes mRNA
- immediate early, early, late
- genome replication by viral DNA pol
- capsid assembly in nucleus
- virions egress by lysis
gene expression phases in adeno
- immediate early for EIA
- helps make more mRNA
- early for DNA pol, which replicates genome
- late for structural proteins- for assembly
adenovirus diagnosis and treatment
- match the diagnostic test to the patient sample
- culture, antigen detection, PCR, serology
- treat immunocompromised patients with cidofovir-dire cases and nephrotoxic
adeno prevention
- vaccine
- used only for military personnel
- reinstated for use in late 2011
- incidence of Ad4 infections plummeted
HPV diseases
- common
- epithelial disease-common, plantar, genital warts
- malignancies-head and neck cancer, cervical cancer, penile cancer
HPV tissue tropism
- differentiated epithelial cells
- infects basal cells, limited amplification and maintenance replication until to top layer, then productive replication
HPV infection
- cut
- productive life cycle for 2-3 weeks,grows up with skin
- growing cells express E7/E6, virus sheds
- lack of immune clearance
- skin becomes overgrown with HPV infected cells- oncogene activation
- causes invasive carcinoma
HPV DNA replication
- host RNA pol transcribes viral mRNA
- host DNA pol synthesizes viral genomes
- viral factors E6 and E7 are oncogenes
HPV diagnosis and treatment
- diagnosis for genital HPV is recommended-DNA tests for type, important to screen for 13 high risk types linked to cancer
- treat warts by excision- freezing, chemical ablation, coposcopy
- treat malignancies with oncotherapy
HPV vaccine
- gardasil-quadrivalent for 6,11,16,18
- ceravix is 16,18
- both are virus like particles-empty capsids- makes antibodies to L proteins in genome