DNA Replication and Mitosis Flashcards

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1
Q

Why did most scientists think that proteins were the genetic material before it was discovered that it is actually DNA?

A

Because they are made of 20 amino acids while DNA are made of just 4, meaning it seemed like there was more potential for complexity and variety in proteins

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2
Q

T. H. Morgan

A

Figured out that genes are located on chromosomes, but still didn’t know whether was proteins or DNA were the genetic material (the two components of chromosomes)

(early 1900s)

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3
Q

Fredrick Griffith

A

worked with two strains of baccterium:
- S cells (pathogenic for mice)
- R cells (harmless for mice)

When he mixed heat-killed remains of the S cells with living cells of the R cells, some R cells became pathogenic

(Early/Mid 1900s)

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4
Q

Oswald Avery, Maclyn McCcarty, and Colin MacLeod

A

repeated Griffith experiment, but once they killed pathogenic cells, they separated them into different molecules (DNA, etc), co-incubated separately with the living nonpathogenic cells, and only the DNA was able to make it pathogenic, and thus DNA was the transformation factor

announced that the transforming substance in bacteria was DNA

BUT

many biologists remained skeptical because there was little known about DNA

(Mid 1900s)

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5
Q

Bacteriophages (shortly, phages)

A

viruses that infect bacteria and were (and still are) widely used in molecular genetics research

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6
Q

What actually is a virus and how does it infect a cell

A

a virus is DNA (sometimes RNA) enclosed by a protective coat, often simply protein (bactoriophage)

they infect cells by injecting the DNA into the cell but not inserting the protein into it

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7
Q

Alfred Hershey and Martha Chase

A

Showed that DNA is the genetic material of a phage known as T2 through blender experiment

experiment showed that only one of the two components of T2 (DNA or Protein) enters an E. coli cell during infection

(mid 1900s)

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8
Q

explain the blender experiment

A

concluded that the injected DNA of the phage provides the genetic information:

virus injects DNA into bacteria, blended to separate bacteria from everything inside, and centrifuged cells form a pellet

DID THIS TWICE,

in 1, made Protein Radioactive (actually made Sulfur radioactive because it occurs in protein but not DNA), and radioactivity was found in liquid (phage protein)

In 2, made DNA radioactive (actually made Phosphorus radioactive because it occurs in DNA but not protein), and pellet was radioactive (phage DNA)

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9
Q

Erwin Chargaaff (and his rules)

A

Two findings became known as Chargaff’s rules
Chargaff’s rules:
1. In DNA,
- amount of A = amount of T
- amount of C = amount of G

  1. The base composition of DNA varies between species

(Mid 1900s)

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10
Q

A Piece of DNA has 30% Adenine, what percent Guanine does it have?

A

20% Guanine

(100 - (30*2))/2

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11
Q

Maurice Wilkins and Rosalind Franklin

A

used technique called X-ray crystallography to study molecular structure

Franklin produced a picture of the DNA molecule using this technique

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12
Q

Watson and Crick

A

The X-ray images enabled Watson to deduce that the DNA molecule was made up of two strands, forming a double helix

Watson and Crick built models of a double helix to conform to the X-rays and chemistry of DNA

They determined that adenine (A) paired only with thymine (T), and guanine (G) paired only with cytosine (C)

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13
Q

What is the word to describe the two strands of DNA that can form a double helix?

A

complementary

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14
Q

Describe Watson and Crick’s model of DNA replication

A

they had a semiconservative model, meaning each daughter molecule will have one old strand conserved from the parent strand, and one new strand

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15
Q

What were the three competing models of DNA replication? What experiment was ran to figure out the right one (and who was behind the experiment)?

A

The three competing models were the…
1. conservative model
2. semiconservative model
3. dispersive model

Experiments by Matthew Meselson and Franklin Stahl supported the simconservative model:

They labeled the nucleotides of the old strands with a heavy isotope of nitrogen, while any new nucleotides were labeled with a lighter isotope

The first replication produced a band of hybrid DNA, eliminating the conservative model

A second replication produced both light and hybrid DNA, eliminating the dispersive model and supporting the semiconservative model

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16
Q

What are the sites DNA replication begins at called? What to they create?

A

origins of replication, create a replication “bubble”

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17
Q

What are the grey strands called?

A

grey strands are called daughter strands

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18
Q

where is a replication fork located

A

the ends of a replication bubble

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19
Q

What are leading strands and lagging strands?

A

The daughter strand that is made continuously is the leading strand, the one that is made in okasaki fragments is the lagging strand

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20
Q

What is the order of enzymes that help DNA replication?

A
  1. Helicase
  2. single strand binding proteins (SSBP)
  3. topoisomerase
  4. primase
  5. DNA polymerase III
  6. DNA polymerase I
  7. Ligase
  8. Telemersae (only in some cells)
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21
Q

What is the role of helicase in DNA replication?

A

To break hydrogen bonds between two strands and open up an origin of replication

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22
Q

What is the role of single stranded binding proteins in DNA replication?

A

to prevent DNA strands from binding back together after they are made a bubble (they want to because they are complementary), to stabilize single stranded DNA

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23
Q

What is the role of topoisomerase in DNA replication?

A

To break DNA strands (covalent bonds), let them untangle, and then rejoin them

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24
Q

What is the role of primase in DNA replication?

A

puts in primer, a short strand of RNA nucleotides, complementary to the DNA nucleotides (make starting point for polymerase)

25
Q

What is the role of DNA polymerase III in DNA replication?

A

to build DNA polymer in the direction of 5’ to 3’ (READS FROM 3’ to 5’)

Creates both covalent bonds (between adjacent nucleotides in the new daughter strand), and hydrogen bonds (to attach the daughter strand to the parental strand strand)

26
Q

What is the role of DNA polymerase I in DNA replication?

A

gets rid of primers and replaces them with DNA (instead of RNA)

27
Q

What is the role of Ligase in DNA replication?

A

to connect the okasaki fragments on the lagging strand

28
Q

What is the role of Telomerase in DNA replication?

A

Adds DNA to the 3’ end of the DNA to the parental strand, that way a primer can go there and allow Polymerase III to copy the DNA missing, including the part that would otherwise have been left shorter

29
Q

Where does the energy in order to do DNA replication come from?

A

Each nucleotide that is added to a growing DNA strand is a nucleotise triphosphate (has 3 phosphates instead of 1)

meaning, in the nucleus, there are a lot of those nucleotides

when they go to bind, since this is an endergonic reaction (making DNA requires energy), two phosphates pop off and provide energy to connect the nucleotides

30
Q

Does each okasaki fragment require a primer?

A

yes

31
Q

Why does DNA get shorter with each replication (in most cells)?

A

RNA primer on the tip of last okasaki fragment on a lagging strand (called telomers) gets left there, and will eventually fall off making that strand too short (and each time it copies it does the same thing to get shorter).

32
Q

Why wouldn’t every cell use telomerase?

A
  1. to avoid getting cancer (telomerase makes you one step closer to cancer)
  2. it’s a waste of energy if you don’t NEED to use it
33
Q

What is the cell cycle?

A

a sequence of events that extends from the time a cell is first formed from a dividing parent cell until its own division.

34
Q

Difference between cytokinesis and mitosis

A

mitosis is division of the nuclear material (including chromosomes)

cytokinesis is division of cytoplasm

35
Q

What are the 4 phases of mitosis in order?

A
  1. Prophase
  2. Metaphase
  3. Anaphase
  4. Telophase (and Cytokinesis)
36
Q

What happens in prophase of mitosis?

A
  • The chromatin condenses down into chromosomes
  • The nuclear envelope dissolves
  • The nucleolus (where ribosomes are made) disappears
  • the centrosomes move towards opposite poles.
    (2 centrosomes with 2 centrioles in each)
  • The Mitotic spindle grows out of the centrosomes (as they move away from each other)
  • Some of the Mitotic spindles will connect to the chromosomes at the centromere (what connects the chromatids)
37
Q

What happens in metaphase of mitosis?

A

chromosomes line up in at center of cell

38
Q

What happens in Anaphase of mitosis?

A

sister chromatids separate and head towards opposite poles

kinetochore motor protein cuts spindle fiber as it is walking down mitotic spindle

the non kinetochore mitotic spindles push against each other to elongate the cell

39
Q

What happens in Telophase of mitosis?

A

reformation of nuclear envelope

reformation of the nucleolus

chromosomes become chromatin

(for both new cells)

40
Q

What happens in Cytokinesis?

A

Cytokinesis is when the cell divides into two at the end of mitosis

in animals, a ring of actin filaments pinch elongated cell into two (creating cleavage furrow)

in plants, vesicles filled with cellulose head towards the center of the cell and start to fuse together making a cell plate that continues to grow until it hits the walls and makes two separate cells

41
Q

What are the parts in interphase (in order)?

A
  1. G1
  2. S (DNA synthesis)
  3. G2
42
Q

What happens during G1 phase of interphase?

A

Cells do their job (there is one chromatid that is considered also one chromosome)

43
Q

What happens during S phase of Interphase?

A

The Chromatid replicates and makes sister chromotids (still considered one chromosome)

DNA replicates

44
Q

What is chromatin?

A

all of the DNA in the nucleus is considered a chromatin

45
Q

What happens in G2 phase of interphase?

A

The cells prepares for its division by making proteins that will be used in mitosis

46
Q

How does a cell decide when to divide?

A

Cells need external signal to tell them when to divide (usually a molecule called a growth factor)

There are also internal signals (checkpoints)

They need to stick to something on a flat service to divide

47
Q

Density dependent inhibition

A

once there is not more room, cells won’t divide anymore (they divide until this point)

48
Q

Does a cancer cell need a growth factor to divide?

A

A cancer cell does not need growth factor to divide

49
Q

What turns a normal cell into a cancer cell?

A

Molecules that control the cell cycle go wrong

50
Q

What do checkpoints do?

A

Stop the cell from dividing until it is ready to divide, make sure cell is ready for whatever is happening

51
Q

Why are cancer cells bad?

A

cancer cells can pass through the checkpoints

The cells use necessary recourses that other cells need, so the other cells die.

52
Q

Contact inhibition

A

cells must be touching other cells to grow

53
Q

What are the three main differences between cancer cells and normal cells?

A

Cancer cells

  1. dont need growth factor
  2. dont have contact inhibition
  3. dont adhere to a surface
54
Q

How do cancer cells spread?

A

Metastasis

55
Q

Metastasas

A

pieces of a cancer tumor get into the bloodstream

56
Q

What is a cancer tumor?

A

A big group of cancer cells

57
Q

What are microtubules?

A

the lines of the spindle

58
Q

what is a chromosome?

A

DNA wrapped around histone proteins