DNA array Flashcards
Outline the general concepts of a microarray
It anlayzes 1000s of genes, proteins, RNA on silicon chip
Briefly cover how microarrays are produced
Pins deposit probes on silicon chips that are fluorescently labelledwhere the sample DNA/Mrna/ protein will hybridize to it, if that specific sequence is present and will emit fluorescence when excited with specific wavelength of lasers, it captured and quantified.
highlight the some of the capabilities and problems associated with MAs
+: Can detect a large number of genes at the same time. Can analyze mRNA, proteins,
Automated, high throughput
-: Not vary good in detecting small changes or chromatin changes, has to have a good sample
Has to be supported with other data, can’t make conclusions based off it
What are the sort of things we can study with MAs
Assessing chromosome amplification, deletion Transcription factor binding Single nucelotide polymorphism Expression profiling Translational activity Pathogen identification Protein arrays