Development of Multicellular Organisms Flashcards

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1
Q

Genome of all cells in an organism are ____ but expression of genes is ____

A

identical

different

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2
Q

what controls development

A

differential gene expression

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3
Q

four major phases in development

A
  1. cell division and proliferation: producing many cells from one
  2. cell specialization/differentiation: creating cells with different characteristics
  3. cell interaction: influences behaviors of other cells
  4. cell movement/migration and rearrangement: forms layers which give rise to structures such as tissues and organs

*all happens simultaneously in different parts of the developing embryo

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4
Q

development

A
  • cells have a memory
  • cells retain record of signals their ancestors received during embryonic development
  • genes expressed by cell depend on environment, both present and past
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5
Q

functional interchange of homologous proteins:

homologous proteins are functionally interchangeable

A
  • basic machinery for development similar for all organisms

- e.g. mouse lacking cerebellum gene –> cerebellum gene from fly inserted into mouse –> mouse developed cerebellum

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6
Q

conserved mechanisms for development

A
  • after fertilization the zygote divides rapidly
  • results in formation of many small cells that are dependent on food stored in egg by the mother
  • genome is inactive initially
  • later genome becomes activated and cells divide and cohere to form a blastula
  • blastula then undergoes massive rearrangements to form gastrula
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7
Q

blastula

A

ball of cells surrounding a hollow cavity

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8
Q

gastrula

A

blastula that undergoes massive rearrangements that has 3 major layers

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9
Q

blastula consists of a sheet of ______ facing the external medium; which gives rise to the ____

A

sheet of epithelial cells

ectoderm

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10
Q

ectoderm

A

precursor of nervous system and epidermis

“attract-o-derm: everything that many people find attractive (hair, skin, eyes, brain)”

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11
Q

part of epithelial sheet becomes tucked into the interior which gives rise to the

A

endoderm

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12
Q

endoderm

A

precursor of gut, lung, and liver

“endternal organs: most of the internal organs”

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13
Q

group of cells that move into the space between the ectoderm and endoderm (break off from the endoderm) gives rise to the

A

mesoderm

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14
Q

mesoderm

A

precursor of muscle and connective tissues

“means of getting around: movement, cardiovascular system, skeleton and muscles “

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15
Q

gastrulation

A

transformation of the blastula, a hollow sphere of cells into a layered structure with a gut

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16
Q

50 percent genes in a fruit fly nematode worm, and human have recognizable ____ in the other species

A

homologs

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17
Q

higher organisms have several homologs of the same gene

A

gene duplication

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18
Q

gene regulatory proteins

A

most important for development

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19
Q

instructions for producing a multicellular animal is contained in the

A

non-coding regulatory DNA sequences associated with each gene

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20
Q

_____ sequences in DNA similar in most organisms but _____ sequences make one organism different from another and provide uniqueness

A

coding

non-coding

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21
Q

cells make developmental decisions long before they should any outward signs of _____

A

differentiation

e.g. appearance of the red cell is the final act

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22
Q

determined

A

cells that are fated to develop into a specialized cell type despite changes in environment

e.g. fated to be a red cell –> if put in another environment –> still becomes a red cell

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23
Q

completely undetermined (not determined)

A

cells that can change rapidly due to alterations in environment

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24
Q

committed

A

cells that have some attributes of a particular cell type but can change with environment

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25
Q

memory of positional values

A
  • before acquiring a particular fate, cells express genes that are markers of their location e.g. they are ‘regionally determined’
  • position specific character of cell called positional value
  • cells retain ‘memory’ of positional value
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26
Q

cellular differentiation:

A

asymmetric division (e.g. development of germ cells) and inductive signaling

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27
Q

asymmetric division

A

-significant sets of molecules distributed unequally between daughter cells

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28
Q

inductive signaling

A
  • definition: induction of a different developmental program in select cells in a homogeneous group leading to altered character
  • cells born the same can become different due to change in environment after birth (different molecules induced)
  • these molecules then directly or indirectly alter the pattern of gene expression between the 2 cells
  • most important environmental cues are signals from neighboring cells
  • few cells closest to the source take on induced character - signal is limited in time and space
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29
Q

types of signals in inductive signaling:

A
  • short range: cell-cell contacts

- long range: substances that can diffuse through the extracellular medium

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30
Q

morphogen

A
  • definition: long rand inductive signal that imposes a pattern on a field of cells
  • exert graded effects by forming gradients of different concentrations
  • each concentration can direct the target cells into a different developmental pathway
  • need an “on” and “off” system
  • antagonists or extracellular inhibitors bind to the signal or its receptor and block interaction
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31
Q

what forms gradients:

A
  • localized production of an inducer that diffuses away from its source
  • localized production of an inhibitor that diffuses away from its source and blocks the action of a uniformly distributed inducer
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32
Q

p granules

A

form germ cells

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33
Q

lateral inhibition and positive feedback

A

steps:

  • system starts off homogeneous and symmetrical
  • environment imposes weak asymmetry
  • positive feedback amplifies effect
  • broken asymmetry is ‘all or none’ phenomenon
  • irreversible: once achieved, external signal becomes irrelevant
    e. g. delta-notch signaling (uses lateral inhibition)
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34
Q

factors underlying diversity in patterns

A
  • combinatorial control: response of a cell to a given signal may differ based on the presence of other signals (combinations create variety)
  • cell memory: effect of a given signal depends on previous experiences of the cell (which may have altered its chromatin, regulatory proteins, transcription and RNA)
  • sequential induction: different signals formed/secreted in a spatial and temporal manner
35
Q

receptor tyrosine kinase (RTK) signaling pathway:

  • ligand family
  • receptor family
A

ligand family –> receptor family

EFG –> EGF receptors

FGF (Branchless) –> FGF receptors (Breathless)

Ephrins –> Eph receptors

36
Q

TGFBeta superfamily signaling pathway:

  • ligand family
  • receptor family
A

ligand family –> receptor family

TGFBeta –> TGFBeta receptors

BMP (Dpp) –> BMP receptors

Nodal

37
Q

Wnt signal pathway

A

ligand family –> receptor family

Wnt (Wingless) –> Frizzled

38
Q

Hedgehog signal pathway

A

ligand family –> receptor family

Hedgehog –> patched, smoothened

39
Q

notch signaling pathway

A

ligand family –> receptor family

delta –> notch

40
Q

brain has ____ neurons

A

10^11

each neuron makes connections with 1000 other neurons

41
Q

phases of neural development

A

Phase 1 genesis of neurons: different cell types develop independently at widely separate locations in embryo according to local program and are unconnected

Phase 2 outgrowth of axons and dendrites/synapse formation: axons and dendrites grow out along specific routes setting up a provisional but orderly network of connections between various parts of the nervous system

Phase 3 refinement of synaptic connections: continues into adult life; connections are adjusted and refined through interactions with distant regions via electric signals

42
Q

neurons are produced in association with

A

glial cells (providing supporting framework and nutrition)

43
Q

CNS consists of _______ and is derived from _____

A

brain, spinal cord, and retina

neural tube

44
Q

PNS consists of ______ and is derived from _____

A

nerves, sensory neurons

neural crest

45
Q

formation of neural tube

A
  • neural tube derived from a single layered epithelium
  • starts with a neural groove on the dorsal side of embryo
  • gradually deepens as neural folds become elevated
  • ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube (neural tube)
  • center of the neural tube is the neural canal
46
Q

programming associated with neural tube

A
  • delta notch signaling controls differentiation into neurons (lateral inhibition and positive feedback)
  • signal proteins secreted from ventral and dorsal side of neural tube act as opposing morphogens, causing neurons at different dorso-ventral positions to express different gene regulatory proteins
47
Q

dorsal cells of neural tube secrete

A

Bone morphogenic protein (BMP) (TGFbeta family): pattern formation, differentiation, secretion of extracellular matrix

48
Q

ventral cells of neural tube secrete

A

sonic hedgehog: depend on proteoglycans for function; activate latent genes; transcription repression to activation

49
Q

where do neural crest cells originate and what do they do during or shortly after closure of the neural tube

A

originate at the dorsal end of the neural tube

they migrate extensively

50
Q

define neurulation

A

closing of neural tube

51
Q

are neural crest cells differentiated or undifferentiated

A

undifferentiated because when they migrate, they assume characteristics of their environment, e.g. adrenal glands

52
Q

development of neural crest cells

A
  1. cells that will become neural crest cells (dorsal end) replicate
  2. migrate
  3. aggregate
  4. differentiate
53
Q

movement of neurons occurs be virtue of

A

glial cells

54
Q

growth cone

A

tip of axon/dendrite that has an irregular spiky enlargement

growth cone crawls through surrounding tissue, trailing the axon or dendrite behind

one of the growth cone starts migrating fast and develops axon-specific proteins- this will form the axon

55
Q

growth cone behavior is dictated by ______ machinery

A

cytoskeletal

56
Q

monomeric GTPases that control the assembly/disassembly of actin filaments which control movement of growth cone

A

Rho and Rac

GDP form: inactive
GTP form: active

57
Q

axon is rich in what protein

A

microtubules

58
Q

lamellipodia and filopodia is rich in what protein

A

actin

59
Q

extracellular matrix environment in regards to migration of growth cones

A

sensed by receptors present on membrane

60
Q

chemotactic factors in regards to migration of growth cones

A

released by neighboring cells

can be attractive or repulsive

61
Q

two classes of extracellular matrix

A

immunoglobulin superfamily

cadherin family

62
Q

contact guidance

A

growth cones often follow a path taken by other cells (e.g. nerve fibers are usually found in bundles)

63
Q

laminin

A

favor axonal outgrowth

64
Q

chondroitin sulfate proteoglycans

A

inhibit axonal growth

65
Q

mechanisms of growth cone guidance

A
  1. extracellular matrix adhesion: growing axon glides over extracellular matrix
  2. cell surface adhesion: growing axon comes into contact with group of cells and grows over the surface of those cells
  3. guidance by pioneer neuron: neuron follows same route as previous neuron
  4. chemoattraction: group of cells secrete molecules that attract growing axon
  5. contact inhibition: growing axon comes into contract with group of cells and is repelled
  6. chemorepulsion: group of cells secrete molecules that repel growing axon
66
Q

dorsal neurons of spinal cord

A

receive and relay sensory information from sensory neurons located in the periphery of the body

67
Q

ventral clusters of neurons of spinal cord

A

develop as motor neurons and send out long axons to connect with specific subset of muscles

68
Q

intermediate location of neurons of spinal cord

A

develop into interneurons that connect specific set of nerve cells to each other

69
Q

guidance of commissural neurons are controlled by

A

chemotactic factors

70
Q

nectrin

A

secreted by cells of the floor plate –> guides movement of commissural cells down towards floor plate

71
Q

once growth cones reaches floor plate, neighboring cells secrete _____ as a repellant to push growth of axon towards brain

A

slit and semaphorin

72
Q

binding of nectrin to its receptor causes opening of

A

calcium channels

73
Q

target cells (of growing neurons) release

A

neurotrophic factors that further draw growing neurons to target cells to synapse

74
Q

most neurons are made in excess and up to ____ die after they reach target cell

A

50%

75
Q

growing neurons that do not receive enough neurotrophic factors

A

die by programmed cell death and do not synapse

76
Q

first neurotrophic factor to be identifed was

A

nerve growth factor (NGF)

77
Q

NGF works through

A

tyrosine kinase (TrkA) receptor

78
Q

NGF promotes survival of

A

specific sensory and sympathetic neurons

79
Q

short term effect of NGF

A

effect on growth cone and neurite extension. effect is local, direct, rapid, and independent of communication with cell body

80
Q

long term effect of NGF

A

effect on cell survival. mediated by its receptor, uptake into cells via endocytosis and stimulation of downstream signaling pathways

81
Q

synaptic remodeling is dependent on 2 rules that create spatial order

A
  1. axons from cells in different regions of retina compete for tectal neurons
  2. axons from neighboring sties which are excited at same time cooperate/collaborate to retain and strengthen synapse with tectal neurons
82
Q

activity dependent synaptic remodeling depends on

A

electrical activity and synaptic signaling

83
Q

what receptor plays an important role in memory formation

A

glutamate receptor (NMDA receptor) via entry of calcium triggers lasting change in synaptic strength