Circadian Rhythm Flashcards

1
Q

circadian rhythm

A

biological rhythm with a 24hr period that persists in constant conditions
present in all organisms

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2
Q

benefit of the CR

A

survival advantage because organisms can anticipate rather than respond to environmental changes

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3
Q

CR functions

A

anticipates regular changes in the environment - tunes internal physiology to the external world
internal synchronisation (temporal organisation) - internal processes in different organs are coordinated
allow synchrony (temporal organisation) between species

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4
Q

examples of CRs

A

behavioural - sleep/wake, drinking, food
biological - glucose uptake, metabolic rate, alcohol degradation
physiological - bp, HR, pain threshold

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5
Q

amplitude

A

measures robustness of circadian period (highest to lowest period)

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6
Q

period

A

duration of one complete cycle in rhythmic variation

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7
Q

free running (tau)

A

rhythm free runs according to circadian clock H>24hrs mouse<24hrs
constant conditions, no external cues

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8
Q

entrainment

A

synchronisation of internal biological rhythms by external cues

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9
Q

zeitgeber

A

external cue
light is the primary zeitgeber
e.g. food intake/temperature

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10
Q

actogram

A

graph in CR research
vertical line = activity

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11
Q

exogenous vs endogenous daily rhythms

A

exogenous - response to change in environment by external/environmental rhythms (not internally generated)
endogenous - generated internally within the organism by a self-sustaining oscillator/biological clock (true CR)

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12
Q

what is the endogenous master clock

A

suprachiasmatic nucleus (SCN)

located at base of hypothalamus (above optic chiasm)

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13
Q

light perception

A

light detected by retina
impulses sent to SCN to entrain clock
rod and cones send signal to RGC via bipolar cells

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14
Q

how do RGCs detect light

A

melanopsin (opsin photopigment)
found in intrisically photosensitive RGCs (ipRGCs)
endoded by Opn4 gene

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15
Q

roles of melanopsin

A

light modulation of sleep
entrainment of CR
pupillary light reflex
exacerbates migraines

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16
Q

3 SCN inputs

A

1)input light pathway: retina-SCN via RHT
2)intergeniculate leaflet (IGL) innervation IGL-SCN conveys photic and non-photic info from dorsal raphe nucleus
3)DRN activated and MRN mediate entraining of arousal (non-photic)

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17
Q

role of CLOCK/BMAL1 heterodimers

A

produce Cry1/Cry2/Per1/Per2 genes in early circadian days - inhibited by nuclear accumulation of Per/Cry complex (late circadian days)
oscillatory feedback loop
core controlled genes (CCGs)
24 hrs to transcribe/translate genes - next cycle when Per/Cry degrades

18
Q

rev-erb + per&cry

A

TF/represses Bmal1
negative regulator of Bmal1 (anti-phase to Per/cry) enhances core oscillations

19
Q

mPer1 gene expression

A

highest expression during the mid circadian day (low proteins levels)
low mPer1 mRNA at the end of the circadian day (highest protein levels)
mPer1 mRNA expression occurs only when nuclear mPer1 protein cleared at the end of the circadian night

20
Q

light entraining

A

RHT releases glutamate & PACAP
increases Ca2+ in SCN
activates MAPK/CaMK/PKA
CREB phosphorylation
Per regulation light resets cycle by increasing Per1/Per2 (clock genes)

21
Q

hamster CR

A

> 24hrs
Tau mutant hamster has a shorter CR
Tau encodes protein kinase which phosphorylates Per1 and controls entry into nucleus
Casein Kinase I epsilon - degrades Per1/PTM of cry/per/changes length of TTFL/controls ability to go back to nucleus

22
Q

in vitro CR monitoring

A

obtain single SCN neurons expressing bio-luminescence reporter gene per-1 luciferase
measure: individual cell oscillations and population
individuals SCN neurons retain CR activity and different period lengths (light up at different time) - cell-cell communication is important

23
Q

structure of SCN neurons

A

shell: AVP/GABA
core: GRP/GABA/VIP
axon projects from core to shell, GABA is an activator and acts on shell, core synchronises shell, shell generates most SCN output, VIP excitatory action (binds VPAC2) like PACAP

24
Q

VIP KO mice

Welsh et al., 2010

A

decreased transcription of per
desynchronised firing of SCN
weak behavioural rhythms

25
Q

AVP mediated communication between SCN neurons

A

resistance to pertubation
AVP V1a-/V1b- normal CR but resistant to jet lag/ when L&D delayed = resynchronisation
AVP role = confers resistance to perturbation

26
Q

which clock genes are present outside SCN

A

per/cry/bmal
otuside SCN
ovary and kidney
in vivo rhythm maintain by SCN signals/in vitro amplitude & precision declines

27
Q

SCN is the master clock and slaves clocks in tissues

SCN communication with peripheral clocks

A

SCN entrains the peripheral clocks:
* hormonal signals - melatonin rhythms regulates CRs in pars tuberalis of pituitary
* cortisol/corticosteroid
* TSH
* Autonomic NS signals
* behavioural signals
* metabolic signals: restricted feeding can entrain liver enzyme rhythms

28
Q

SCN output

A

subparaventricular zone (SPZ) - dSPZ controls body temp and projects to MPO region vSPZ relays to DMH (corticosteroid production)
dorsomedial hypothalamus (DMH) GABAergic to ventrolateral preoptic nucleus (VLPO) (arousal)
orexin neurons in lateral hypothalamus (LHA) - wakefulness and feeding
MCH neurons - GABAergic - active during sleep

29
Q

melatonin

A

secreted by pineal gland - pinealocytes (which have a dense capillary network)
secreted during darkness (high in CSF/blood/saliva)
short t1/2 15-20 mins - fall at dawn/low during daytime
sends info about time of day to tissue which need it
humans - facilitates sleep and lowers body temperature

30
Q

input pathway

A

PVN -multisynaptic pathway - superior cervical gangia in SC
sympathetic (adrenergic) fibres from SCG - innervate pineal gland
adrenergic fibres end in varicosities (no synapses) release NA close to pinealocytes (where sympathetic neuron fires)

light - SCN stimulation (GABA) - PVN inhibition - suppression of melatonin

31
Q

melatonin location

A

SCN intensely in pars tuberalis of pituitary
melatonin onset - natural dim light
Receptors: DMH/VMH/MPO/PVTN/hippocampus

32
Q

control of sleep

sleep = reduction of synaptic strength

A

controlled by 2 pathways: homeostatic/circadian
increased sleep = increased energy consumption duration
accumulation of metabolic byproduct - adenosine - activates sleep promoting neurons
caffeine blocks adenosine binding via R’s

33
Q

wake vs sleep

A

waking = synaptic potentiation
sleep = synaptic downscaling, removes irrelavant info during memory consolidation/recovery of learning potential
synaptic proteins required for memory consolidation downregulated during sleep

34
Q

sleep removes cellular by products

A

CSF diffuses into extracellular space to clear waste (sleep increases extracellular space by 60% vs 5% of sleep during awake
AB cleared 2x faster in sleep vs awake (Xie et al., 2013)
sleep improves both types of memory: declarative and non-declarative

35
Q

cost of learning

A

increased energy consumption/signal:noise ration
reduced selectivity of firing
saturation of plasticity potential

36
Q

nREM sleep

non REM sleep reactivates neural circuits implicated in information enco

A

hippocampus (temporary store/sharp wave ripples) to…
neocortex (long term store/slow wave oscillations)

thalamocortical spindles (coincide with slow wave prime neocortex for LT memory storage)
slow wave oscillations: synchronise spindles and sharp wave ripples/facilitates reactivation of hippocampal memories and redistribution to neocortex/allow plasticity at cortical synapses

37
Q

circadian disruptors

A

change in period - high fat
change in phase - shift work
change in amplitude - night eating, insulin resistance
peripheral clocks: liver/muscle/fat/pancreas

38
Q

when do rhythm disturbances occur

A

when clock is not synced with the environment
* shift work (outside 8am-6pm)
* jet lag
* old age
several days needed to resynchronise to new LD cycle (1day/1hr shift)
desynchronisation brings about: poor sleep/poor cognition/mood swings/GI probelms (risk of disease and cancer)

39
Q

evidence of CR disturbances having an effect on health

A

increased risk of breast cancer in female shift workers and cabin staff for airlines
circadian disruption in carcinogenic
jones et al., 2019 - serial questionnaire (significant trend with number of hours per week but not night) (melatonin suppression/CR disruption?)

40
Q

faster tumour growth in mice with disrupted CR

Filipski et al., 2004

A

mice injected with metastatic cells - tumour weight increased
decreased survival

41
Q

timing of food intake contributes to weight gain

Arble et al., 2009

A

mice are nocturnal ~80% calorie intake at night
high fat food provided only during day/night
faster weight gain when food is consumed at the wrong circadian time (during day)

42
Q

mutant animals with shorter circadian period (22hrs) under a 24hr light cycle

Martino et al., 2008

A

cardiac & renal disease when internal clock in SCN is in conflict with external environment - usually in shift workers
tau mutant (encodes Ck1e) affects TTFL - shorter endogenous period (22hr) in hamsters
tau under 24hrs: heart disease (cardiomyopathy/fibrosis/kidney disease/early death)
tau under 22 hrs: normal cardiac and renal structure and function