Chapter 7 Flashcards

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1
Q

What is the historical significance of microscopes in cell biology?

A

Microscopes were invented in 1590 and refined during the 1600s. Key discoveries include Robert Hooke observing cell walls in 1665 and Antoni van Leeuwenhoek observing living cells later.

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2
Q

What is the principle of light microscopy (LM)?

A

Light microscopy involves passing visible light through a specimen and focusing it using glass lenses. It can magnify objects up to ~1,000× their actual size and resolve details up to 0.2 micrometers (200 nm).

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3
Q

What are the different types of light microscopy?

A

Brightfield Microscopy: Light passes directly through the specimen, often requiring staining.
Phase-Contrast Microscopy: Amplifies density variations for examining living cells without staining.
Differential Interference Contrast (DIC): Highlights density differences for a 3D appearance.
Fluorescence Microscopy: Uses fluorescent dyes or antibodies to visualize specific molecules.
Confocal Microscopy: Uses a laser to focus on a single plane, eliminating out-of-focus light for sharp, 3D images.
Deconvolution Microscopy: Computationally processes blurry images from multiple planes into a clearer 3D reconstruction.
Super-Resolution Microscopy: Combines fluorescent signals to resolve structures as small as 10–20 nm.

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4
Q

What is electron microscopy (EM) and its types?

A

Electron microscopy uses electron beams instead of light for imaging, offering ~100× higher resolution than light microscopy. Types include:

Scanning Electron Microscopy (SEM): Examines surface structures with 3D imaging.
Transmission Electron Microscopy (TEM): Examines internal structures by passing electrons through a thinly sliced, heavy-metal-stained specimen.
Cryo-Electron Microscopy (Cryo-EM): Freezes specimens at < -160°C, preserving natural structures without preservatives.

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5
Q

What are the applications of microscopy in cell biology?

A

Microscopy reveals the structure and function of organelles such as the nucleus, mitochondria, and ribosomes. It combines with cytology (cell structure) and biochemistry (chemical processes) for a deeper understanding of cellular metabolism.

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6
Q

What are the key technical advancements in microscopy?

A

Fluorescent Markers: Label specific structures for high-detail visualization.
Confocal and Deconvolution Microscopy: Sharpen images of living tissues and cells.
Super-Resolution Microscopy: Uncovers subcellular structures previously unseen.
Cryo-EM: Enables 3D imaging of complex protein structures and other macromolecules in their native states.

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7
Q

What are the concepts of magnification, resolution, and contrast in microscopy?

A

Magnification: Enlarges objects, allowing study of microscopic structures.
Resolution: The ability to distinguish fine details; inversely related to wavelength. LM limit: 200 nm; EM can resolve to ~2 nm or smaller.
Contrast: Enhances visibility using dyes, staining, or fluorescence.

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8
Q

How do light microscopy (LM) and electron microscopy (EM) compare?

A

Medium: LM uses visible light; EM uses electron beams.
Resolution Limit: LM ~200 nm; EM ~2 nm.
Living Cells: LM can image living cells; EM requires sample preparation that kills cells.
3D Imaging: Confocal microscopy (limited) in LM; SEM (high detail) in EM.
Applications: LM for basic cell structure and live-cell imaging; EM for organelle and protein structure.

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9
Q

What is cell fractionation and its purpose?

A

Cell fractionation is a process to separate and analyze cell components based on size and density, used to study specific organelles and their functions (e.g., isolating mitochondria for cellular respiration studies).

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10
Q

Describe the process of cell fractionation.

A

Homogenization: Tissue cells are broken down using a blender to create a homogenate.
Centrifugation: Homogenate is spun in a centrifuge, separating components by size and density.
Differential Centrifugation: Sequential centrifugation steps separate organelles of decreasing size.

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11
Q

What are the common features of prokaryotic and eukaryotic cells?

A

Both have a plasma membrane, cytosol, chromosomes (carry DNA), and ribosomes (synthesize proteins).

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12
Q

What are the key differences between prokaryotic and eukaryotic cells?

A

Prokaryotic Cells: No nucleus, DNA in a nucleoid region, lack membrane-bound organelles, typically 1–5 µm in diameter.
Eukaryotic Cells: True nucleus with DNA enclosed in a double membrane, contain membrane-bound organelles, typically 10–100 µm in diameter.

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13
Q

What factors influence cell size?

A

Size Limits: Smallest known cells (e.g., mycoplasmas) are 0.1–1 µm in diameter; typical bacteria are 1–5 µm; eukaryotes are 10–100 µm.
Surface Area-to-Volume Ratio: Larger surface-to-volume ratios in smaller cells are critical for efficient transport of oxygen, nutrients, and waste.

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14
Q

What is the significance of the surface area-to-volume ratio in cells?

A

As cell size increases, the surface area grows slower than volume, affecting the efficiency of nutrient and waste transport. Specialized cells (e.g., intestinal cells) increase surface area using microvilli.

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15
Q

What is the structure and function of the nucleus in eukaryotic cells?

A

The nucleus contains most of the cell’s genetic material, enclosed by the nuclear envelope with pores for molecular transport. It organizes DNA into chromosomes and synthesizes ribosomal RNA (rRNA) in the nucleolus.

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16
Q

What are ribosomes and their types?

A

Ribosomes are complexes of rRNA and proteins, comprising large and small subunits. Types include:
Free Ribosomes: Located in the cytosol, synthesize proteins functioning within the cytoplasm.
Bound Ribosomes: Attached to the rough ER or nuclear envelope, produce proteins destined for membranes, organelles, or secretion.

17
Q

Why do only a few large unicellular cells exist?

A

Large unicellular cells face limitations in exchanging oxygen, nutrients, and waste due to their surface area. Cell differentiation and specialization help overcome these limitations.

18
Q

What is the difference between prokaryotes and eukaryotes?

A

Prokaryotes: Lack a nucleus, have simpler cell structures, and include bacteria and archaea.
Eukaryotes: Have a well-defined nucleus, complex internal structures, and include animals, plants, fungi, and protists.

19
Q

What is the Golgi apparatus and its function?

A

The Golgi apparatus is a cellular “warehouse” that receives, sorts, processes, and ships molecules (mostly proteins and lipids) from the ER. It modifies proteins, packages them into vesicles, and dispatches them to their final destinations

20
Q

Describe the structure of the Golgi apparatus.

A

The Golgi consists of flattened membranous sacs called cisternae, stacked like pita bread. It has two sides: the cis face (receiving side) and the trans face (shipping side). Molecules move through the Golgi in a directional manner, undergoing modifications and sorting.

21
Q

What are lysosomes and their functions?

A

Lysosomes are membrane-bound sacs filled with hydrolytic enzymes that break down macromolecules (proteins, lipids, carbohydrates, nucleic acids). They digest food, recycle cell material (autophagy), and defend against pathogens.

22
Q

What are vacuoles and their functions?

A

Vacuoles are large vesicles originating from the ER and Golgi apparatus. Functions include storage and digestion (food vacuoles), water regulation (contractile vacuoles), enzymatic breakdown, and storage of important substances (e.g., proteins, pigments, toxins).

23
Q

What is the endosymbiont theory?

A

The endosymbiont theory suggests that mitochondria and chloroplasts evolved from prokaryotic cells engulfed by an ancestral eukaryotic host cell. Evidence includes their double membranes, circular DNA, and independent reproduction.

24
Q

What is the structure and function of mitochondria?

A

Mitochondria are found in nearly all eukaryotic cells and carry out cellular respiration, producing ATP by breaking down sugars, fats, and other fuels using oxygen. They have an outer membrane, an inner membrane folded into cristae, and two compartments: the intermembrane space and

25
Q

What is the structure and function of chloroplasts?

A

Chloroplasts are found in green tissues of plants and algae, responsible for photosynthesis. Key components include thylakoids (flattened sacs), grana (stacks of thylakoids), and stroma (fluid containing DNA, ribosomes, and enzymes). Chlorophyll in thylakoids absorbs sunlight for energy conversion

26
Q

What is the endosymbiont theory?

A

The endosymbiont theory suggests that mitochondria and chloroplasts evolved from prokaryotic cells engulfed by an ancestral eukaryotic host cell. Evidence includes their double membranes, circular DNA, and independent reproduction.

27
Q

What are peroxisomes and their functions?

A

Peroxisomes are specialized metabolic compartments enclosed by a single membrane. They produce hydrogen peroxide by transferring hydrogen from substrates to oxygen, break down fatty acids, and detoxify harmful substances. They contain enzymes that convert hydrogen peroxide into water.

28
Q

What is the cytoskeleton and its functions?

A

The cytoskeleton is a network of fibers extending throughout the cytoplasm, providing mechanical support, maintaining cell shape, and facilitating cell movement. It consists of microtubules, microfilaments, and intermediate filaments.

29
Q

What are the components and functions of microtubules?

A

Microtubules are hollow rods made of tubulin proteins, providing cell shape, support, and tracks for organelle movement. They play a critical role in chromosome separation during cell division and are found in structures like cilia and flagella.

30
Q

What are the components and functions of microfilaments?

A

Microfilaments are thin rods made of actin, bearing tension and supporting cell shape. They are involved in cell motility, muscle contraction, and cytoplasmic streaming. They work with myosin motor proteins to enable movement.

31
Q

What are the components and functions of intermediate filaments?

A

Intermediate filaments are made of proteins like keratins, providing structural stability and resisting tension. They anchor organelles and compose the nuclear lamina, supporting the nuclear envelope.

32
Q

What are the key functions of the plant cell wall?

A

The plant cell wall provides protection, shape maintenance, prevents water overload, and offers structural support. It facilitates cohesion between adjacent cells for tissue formation.

33
Q

What is the composition of the plant cell wall?

A

The plant cell wall is composed of cellulose microfibrils, hemicelluloses, pectins, and various proteins. It has primary and secondary walls, with the secondary wall providing additional strength and rigidity.

34
Q

What is the extracellular matrix (ECM) in animal cells?

A

The ECM in animal cells provides structural support, communication, and signal transduction. It is composed of glycoproteins (e.g., collagen), proteoglycans, and fibronectin, which bind to integrins on the plasma membrane.

35
Q

What are the types of cell junctions in animal cells?

A

Tight Junctions: Prevent leakage of extracellular fluids between cells.
Desmosomes: Connect cells into strong sheets, providing mechanical stability.
Gap Junctions: Channels allowing exchange of ions and small molecules between cells, essential for communication.