Chapter 6 - Photosynthesis Flashcards
Photosynthesis
- Where primary producers (Autotrophs E.g., plants) get their energy
- Carried out by plants and some protistans (Algae)
- Uses the kinetic energy from sunlight (photons) to make glucose from CO2 and H2O
Endosymbiosis
- One organism living inside another and both benefiting from that relationship
- “Endo” = Inside
- “Symbiosis” = Living
- Made photosynthesis possible (photosynthetic bacterium entered eukaryotic cell a long time ago and formed chloroplasts. Why able do photosynthesis now)
Chloroplasts
- Located in the cells in a plants leaves
- Where photosynthesis occurs
- Has two membranes
Stroma
- Fluid-filled interior of chloroplast (‘cytoplasm’)
Thylakoids
- In the chloroplasts
- Internal membrane folded into a series of flat, interconnected discs
Granum
- Stack of thylakoid discs in the chloroplast
Chlorophyll
- Pigment in the chloroplasts
- Pigment is a molecule that absorbs light
- Thylakoids contain chlorophyll which gives green plants their colour
Sunlight
- A form of kinetic energy
- Light is made up of electromagnetic energy which travels in waves
- Visible light: 400-700 nm wavelength
- This wavelength is:
o Short enough to have sufficient energy to excite e- in pigments –> transfer energy
o Long enough that there is not too much energy that might damage the cell
Chlorophyll Light Absorption
- Absorbs most red, orange, blue, indigo, and violet light
- Green and some yellow are reflected – which is why plants look green
Photosystems
- Specialised protein complexes
- Clusters of chlorophyll pigment
- Responsible for absorbing light energy and transferring electrons
- Primarily PSII and PSI
- Located in thylakoid membrane
Light Dependent Reaction
- Converts solar energy to chemical energy
- Takes place in thylakoids
- Inputs: Light energy, H2O
- Outputs: O2, ATP and NADPH
- Include Photosystems
Step #1 – Light absorption
- Light energy is absorbed by chlorophyll pigments within the photosystem II (PSII)
- This excited the e- in the reaction centre
- Light energy ejects 2 e- from PSII
Step #2 – Water Splitting (Photolysis)
- To replace the lost e-, PSII split H2O molecules to replace lost 2e-
- This releases oxygen as a by product
- Providing e- to continue the chain
Step #3 – Electron Transfer
- The excited e- (ejected) are passed along an electron transport chain (ETC) within the thylakoid membrane
Electron Transport Chain
- Collection of proteins e- pass through in a series of redox reactions (reactions involving the transfer of elections)
- This ultimately generates a proton gradient that drives energy release
Step #4 – Proton Gradient Formation
- As e- move along the ETC, H+ builds up inside the thylakoid
- Captured energy is used to pump H+ from the stroma into the thylakoid compartment through transporter proteins, creating a concentration gradient
- Important to generate ATP through ATP synthase
Step #5 – Photosystem I (PSI)
- e- from the ETC reach another protein containing chlorophyll called Photosystem I (PSI)
- There, they are further energised by light absorption
Step #6 NADPH Formation
- e- again are “excited” and move along to another ETC
- The high-energy e- from PSI are used to reduce NADP+ (NADP+ + H+) to NADPH
- This is another energy carrier molecule
Step #7 ATP Synthesis
- H+ that build up inside the thylakoid, due to the proton gradient, move across the gradient through an enzyme ‘ATP Synthase’
- The movement of H+ through ATP synthase provides energy needed to convert ADP to ATP
- ADP + Pi (inorganic phosphate) –>ATP
Light Independent Reaction (Calvins Cycle or Dark Reaction)
- “Synthesis” part of photo synthesis
- Use chemical energy from light dependent reactions (“photo”)
- Occurs in the stroma in the light or dark
- Inputs: CO2, ATP, NADPH
- Output’s: Glucose, NADP+, ADP
Rubisco
- Enzyme that catalyses the first step of carbon fixation
- Key enzyme for converting inorganic carbon into organic
RuBP (Ribulose bisphosphate)
- A five-carbon sugar that acts as a CO2 acceptor molecule
- Facilitating carbon fixation
PGA (phosphoglycerate)
- Three carbon molecule
- Plays a crucial role as an intermediate in the Calvin Cycle
PGAL (Phosphopglyceraldehyde)
- Three carbon compound
- Plays essential role in glucose formation and regeneration of RuBP
Stage #1 – Carbon Fixation
- Carbon fixation means to combine CO2 molecules into organic molecules
1. Enzyme protein Rubisco attaches CO2 to RuBP
2. Produces PGA
Stage #2 Reduction
- Energy stored in ATP and NADPH is released
- PGA is reduced to PGAL
- Two PGAL combine to make glucose
Stage #3 Regeneration (regenerates RuBP)
- Stages 1 & 2 use CO2 to make glucose, but it is the Calvin “Cycle”
- RuBP must be regenerated so the cycle can start again
1. Energy stored in ATP is released
2. PGAL is used to regenerate RuBP for the next cycle
Photosynthesis without light
- In the dark and winter (when plants drop their leaves) they use the glucose they made to get ATP through aerobic respiration
- Plants have 3 pathways for this: C3, C4, and CAM (based on the number of carbon atoms in the first stable product of carbon fixation during photosynthesis)
- All three produce PGAL which can be turned into other organic molecules like glucose, cellulose, starch etc.
C3 Pathway
- The first CO2 acceptor is a 3-carbon molecule
- Needs a continuous supply of CO2
- CO2 can’t be “fixed” in these plants for long
- Stomata always open –> lose water continuously
- Most common pathway, only possible in humid climates with moderate temps and CO2 levels
- E.g., Rice, potato, wheat, most trees
C4 Pathway
- The first CO2 acceptor is a 4-carbon molecule
- Store CO2 for a short time
- Stomata can close for some part of the day to reduce water loss
- Dominate in warm, sunny, moderately humid climates, low CO2
- E.g., Corn, sugarcane, crab grass, many grasses
CAM Pathway
- Very different pathway to make PGAL
- CO2 is stored all night long (H2O levels are higher and Temperature lower)
- Results in much less water loss
- Dominant plants in desert conditions (hot, dry environments with water conservation)
- Cactus, pineapple, orchids
Why We Need Plants
- Plants pull CO2 from the atmosphere
- Produced by respiration, fossil fuel combustion, etc.
- Plants release O2 into the atmosphere
- Used for respiration by animals and plants
Earth’s Atmosphere and CO2
- Early Earth’s atmosphere had no O2.
- Biomolecules (proteins, phospholipids, etc.) formed spontaneously, leading to living organisms.
- Photosynthesis released O2 –> stopped spontaneous biomolecule formation due to oxidation.
- O2 is highly reactive, forming free radicals that damage tissues and break apart organic molecules.
- Organisms evolved mechanisms to neutralize O2 by adding H+, converting it into water.
- Eventually, bacteria evolved a metabolic pathway (i.e. glycolysis and citric acid) to strip H+ from organic molecules (carbs, proteins, fatty acids), releasing energy that can be turned into ATP
- O2 accepts H+ at the end, forming water and detoxifying O2.
- These bacteria later became endosymbionts in eukaryotic cells (mitochondria).
- Mitochondria use O2 to produce 36 ATP per glucose molecule, compared to 2 ATP without O2.