Chapter 3: From Genes to Proteins Flashcards
Nucleotide
Includes the sugar, base and the proteins
DNA
Is composed of A,C,G and T bases.
Purines
Adenine (A) and guanine (G)
Pyramidines
Cytosine (C) and thymine (T)
RNA
Is composed of A, C, G and U. The Uracil replaces the thymine.
A,C,G,T and U why are they known as bases?
They can participate in acid-base reactions. They donate or accept protons only in extremely low or high pH. (not relevant to the body)
Main differences between RNA and DNA
DNA and RNA both have different forms of sugars. DNA has deoxyribose and RNA has ribose. The difference is that deoxyribose has a hydrogen rather than an alcohol. RNA has U instead of the T.
Nucleoside
The base of the DNA or RNA: ie. A,C,G, U or T and the sugar
Number system of cyclic sugars
The sugar atoms are numbered with primes to distinguish them from the atoms of the attached bases.
The naming system of phosphate groups
If there is only one phosphate attached is its the base + monophosphate. Two phosphates would be base+ diphosphate
CoA: Coenzyme A
It contains the residue of pantothenic acid (vitamin B) and adenosine
NAD: nicotinamide adenine dinucleotide
The structure also contains an adenosine.
FAD: Flavid adenine dinucleotide
Also with an adenosine
Phosphodiester bond
the linkage between nucleotides. The bond connects the two sugars form the C5’ and C3’.
polynucleotide
A molecule composed of many nucleotide units
Backbone
It consists of the sugar-phosphate groups. The repeating sugar-phosphate groups
What bases are pairs
A and T or U. C and G
Sugar-phosphate backbones
The backbone is a strand that when they join with another strand it is known as the DNA double helix. They are bonded via hydrogen bonding.Has a distance of 10.85 A
DNA double helix
Two antiparallel strands. One strands goes from 5’-3’ and the other is 3’-5’.
Replication
The parental strand will act as a template for the assembly of new strands.
Central Dogma of molecular biology
A portion of the DNA, the gene, gets transcribed into a complementary strand of RNA. The RNA is translated into protein
DNA Replication
The double helix unwinds and free floating nucleotides will complement the bases from the parental strand creating an identical complementary strand.
Coding Strand
The DNA strand from 5’to 3’ the non template
Non coding strand
The DNA strand that is the template that runs from the 3’ to 5’ direction.
RNA synthesis
mRNA bases will complement the noncoding strand. The mRNA will be translated by a ribosome or rRNA. The tRNA will then carry amino acids (codons) to the mRNA. This will then form the proteins.
Protein Synthesis
The tRNA will complement the mRNA strand. The mRNA strand consist of the codons and the tRNA of the anti-codons which code for the amino acids. Each three bases code for a certain amino acid. The codons are translated to the proteins
Genetic Code
The correspondence between amino acids and mRNA codons are known as the genetic code. There are a total of 64 codons. But only 20 amino acids