chapter 17 Flashcards

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1
Q

○ What is the link between genotype and phenotype

A

§ Proteins

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2
Q

○ What is gene expression

A

Process by which dna directs the synthesis of proteins

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3
Q

What are the two stages of gene expression

A

Transcription and translation

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4
Q

○ Who was the first to suggest that genes dictate phenotypes through enzymes

A

Archibald garrod

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5
Q

What did archibald garrod postulate

A

Symptoms of disease reflect an inability to make a particular enzyme

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6
Q

what is one gene-one enzyme hypothesis

A

§ That a gene dictates the production of a specific enzyme

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7
Q

what did american biochemist and geneticist george beadle speculate about drosophillia

A

each mutation affecting eye color blocks pigment synthesis at a specific step by preventing production of the enzyme that catalyzes that step

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8
Q

What experiment did beadle and tatum do

A

They chose to study the protein-coding genes required for a specific nutritional acitivity
They caused mutations in genes by bombarding the neurospora with x rays

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9
Q

what are some examples of nonenzymic proteins

A

kertain and hormonal insulin

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10
Q

Proteins that are not enzymes are what

A

gene products

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11
Q

How many polypeptides does hemoglobin contain

A

Two and because of that two genes code for the protein

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12
Q

What is the function of hemoglobin

A

Oxygen transporting protein

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13
Q

what is alternative splicing

A

Eukaryotic gene can code for a set of closely related polypeptides

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14
Q

what provides the instructions for making proteins

A

genes

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15
Q

what is the bridge between dna and protein synthesis

A

nucleic acid RNA

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16
Q

what is the difference between dna and rna

A

§ Dna is deoxyribose and rna is ribose

And dna sequence = atgc and rna sequence = augc

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17
Q

How many nucleotides do genes have

A

hundreds and thousands of them

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18
Q

What is transcription

A

§ Synthesis of rna using information in the dna

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19
Q

What is mRNA

A

Messenger RNA because it carries a genetic message from dna to the protein-synthesizing machinery of the cell

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20
Q

What happens during translation

A

he mRNA molecule is trnaslated into an amino acid sequence of polypeptide

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21
Q

Where does translation happen

A

ribosomes

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22
Q

○ What are ribosomes

A

§ Molecular complexes that make proteins

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23
Q

Transcription and translation is similar for what

A

Bacteria and eukaryotes

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24
Q

○ What does bacteria not contain

A

A nuclei

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25
Q

Since bacteria does not have a nuclei what problems does it face with transcription and translation

A

Nuclear membrane does not separate bacterial dna and mRNA from ribosomes and that means the translation of mrna can begin while transcription is still in process

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26
Q

○ What is the importance of the nuclear membrane

A

Separate the transcription from translation in space and time

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27
Q

○ Where does transcription occur

A

§ In the nucleus but mrna is transported to the cytoplasm for translation

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28
Q

Where does translation occur

A

§ In the cytoplasm

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29
Q

What does the transcription of a protein encoding gene lead to

A

Pre mRNA

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30
Q

○ What is primary transcript

A

The initial RNA transcript from any gene

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31
Q

○ What was the central dogma theory

A

§ Idea that the flow of dna information went in one way

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32
Q

How many nucleotide bases are there for each amino acid

A

§ 4 nucleotide bases to specify 20 amino acids

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33
Q

What is the flow of information from gene to protein based on

A

§ Triplet code

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34
Q

○ What is the triplet code

A

§ The genetic instructions for a polypeptide chain are in written in the dns as a series of nonoverlapping, three-nucleotide words

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35
Q

○ What is the template strand

A

§ One strand that is being transcribed because it provides the pattern or template for the sequence of nucleotides being transcribed

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36
Q

○ What way is a rna molecule strand synthesized

A

§ Antiparallel direction to the template strand

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37
Q

What are codons

A

mRNA nucleotide triplets

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38
Q

What way are codons written

A

5’ to 3’

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39
Q

What is the coding strand

A

The non template dna strand

40
Q

○ What does rna polymerase do

A

§ Pries the strands of dna apart and joins the complimentary rna nucleotides to the dna template strand which then elongates the rna polynucleotide

41
Q

○ What way does rna polymerase assemble

A

§ 5 to 3 direction

42
Q

○ What end does rna polymerase add to

A

§ 3 end

43
Q

○ What is the difference between dna polymerase and rna polymerase

A

§ Rna polymerase can start a chain from scratch and they don’t need a primer

44
Q

○ What is the promotor

A

§ Dna sequence where rna polymerase attatches and initiates transcription

45
Q

○ In bacteria what is the sequence that signals the end of transcription

A

§ Terminator

46
Q

○ What is the transcription unit

A

§ Stretch of dna downstream from the promotor that is transcribed into an rna molecule

47
Q

○ What type of rna polymerase does bacteria have

A

§ The kind that synthesizes mrna but other types of rna in gene expression (ribosomal rna)

48
Q

○ How many rna polymerases do eukaryotes have

A

§ 3 in the nuclei

49
Q

○ What is the function of rna polymerase 2

A

§ Pre-mRNA synthesis

50
Q

What do the other eukaryotic rna polymerases do

A

§ Transcribe molecules that are not translated into protein

51
Q

○ What are the 3 stages of rna transcription

A

Initiation, elongation, termination

52
Q

○ What is the start point

A

§ The nucleotide where rna polymerase actually begins synthesizing the mrna

53
Q

○ What happens in the initiation stage of rna transcription

A

§ Rna polymerase binds to the promotor

§ Polymerase unwinds dna stands and starts synthesis @ start point

54
Q

○ What happens in the elongation stage

A

§ Polymerase moves downstream
§ Unwinds the dna and elongates the rna transcript 5 to 3
§ Dna strands re-form a double helix

55
Q

○ What happens in the termination stage

A

§ The rna transcript is released

§ Polymerase detaches from dna

56
Q

○ What is a difference between the way the rna poly binds to the promotor in bacteria and eukaryotes

A

§ Eukaryotes they use transcription factors

57
Q

○ What are transcription factors

A

Proteins that help guide the binding of rna polymerase and initiation of transcription

58
Q

○ What is the transcription initiation complex

A

§ Complex of transcription factors and rna poly 2 bound to the promotor

59
Q

○ What is the TATA box

A

§ Crucial promotor dna sequence which forms the initiation complex at a eukaryotic promotor

60
Q

What happens after the transcription factors are attatched to the promoto

A

§ Enzyme unwinds the two dna strands and begins transcribing the template strand at the start point

61
Q

Rna polymerase adds nucleotides to what end

A

3 end

62
Q

○ What is the affect of many polymerase molecules

A

Increases the amount of mrna transcribed and it helps the cell make the encoded protein in large amounts

63
Q

○ What is a difference between the termination in bacteria and eukaryotes

A

§ In bacteria transcription proceeds through a terminator sequence in the dna and it functions as the signal
§ Eukaryotes rna ply2 transcribes a sequence on the dna called the polyadenylation signal sequence

64
Q

○ What happens during rna processing

A

§ Both ends of the primary transcript are altered

65
Q

○ How is the pre-mrna modified

A

§ 3 end(synthesized first) recieves the 5 cap

66
Q

○ What is the 5’ cap

A

§ Modified form of guanine added onto the 5’ end after transcription added to the pre-rna

67
Q

what is the reading frame

A

subsequent codons are read in groups

of three nucleotides

68
Q

what is rna processing

A

both ends of the primary transcript are altered.

69
Q

what is the poly-a-tail

A

At the 3 end, an enzyme adds 50 to 250 adenine nucleotides

70
Q

what is the function of the poly-a-tail

A

They facilitate the export of mRNA from the nucleus.
○ They help protect mRNA from hydrolytic enzymes.
○ They help the ribosomes attach to the 5 end of the mRNA.

71
Q

what is rna splicing

A

removal of a large portion

of the RNA molecule

72
Q

what is an intron

A

Noncoding segments of nucleotides called intervening regions

73
Q

what is an exon

A

are eventually expressed, usually by being translated into amino
acid sequences.

74
Q

what do snRNPS

A

recognize the splice sites

75
Q

what is a splicesome

A

remove introns in protein-encoding genes

76
Q

when does splicing occur

A

without proteins

77
Q

what are the properties of rna

A

single stranded
contain functional groups
can

78
Q

what is alternative splicing

A

process of selecting different combinations of splice sites within a messenger RNA precursor (pre-mRNA) to produce variably spliced mRNAs.

79
Q

what does the splicesome do

A

interacts with certain sites along an intron, releasing the introns and joining
together the two exons that flanked the introns

80
Q

because of introns

A

a single gene can encode for more than one kind of polypeptide

81
Q

trna molecule is…

A

a translator and turns mrna into an amino acid

82
Q

what is the function of trna

A

transfers amino acids from cytoplasmic pool to growing polypeptide

83
Q

what is an anticodon

A

at the end of the trna

84
Q

what is the site of translation

A

the ribosome

85
Q

where is protein made in eukaryotes

A

nucleolous

86
Q

what does the p site do

A

holds the tnra of the growing polypeptide chain

87
Q

what does the a site do

A

holds the trna carrying the next amino acid

88
Q

where does translation take place

A

in the ribosomes

89
Q

what is the function of rrna

A

main constituient between a and p site and it is a catalyst for peptide bond formation

90
Q

what are point mutations

A

changes to a single nucleotide gene

91
Q

what is a nucleotide pair substitution

A

replacement of one nucleotide and its partner

92
Q

what is a silent mutation

A

no observable effect on the phenotype

93
Q

missense mutaions

A

change one amino acid to another

94
Q

what is a nonsense mutation

A

causes translation to be terminated prematurely

95
Q

what is a mutagen

A

physical and chemical agents

96
Q

what is gene editing

A

altering genes in a specific way