Chapter 11 Flashcards
contribute by depleting O2
Aerobes
oxidize reduced inorganic chemicals to
obtain energy.
Chemolithotrophs
use alternative electron acceptor
Anaerobes
are group of methane-producing archaea
Methanogens
how do Methanogens generate ATP
Oxidize H2 gas
what do Methanogens use as a terminal electron acceptor
CO2
places where Methanogens are found
Sewage, swamps, marine sediments, rice paddies, digestive tracts
anaerobic respiration
Anaerobic Chemoorganotrophs
oxidize organic compounds to obtain energy
Chemoorganotrophs
what does Anaerobic Chemoorganotrophs produce
Produce hydrogen sulfide (rotten-egg smell)
is corrosive to metals
H2S
Important in sulfur cycle
Anaerobic Chemoorganotrophs
common fermenters
Clostridium and Clostridioides
Gram-positive rods that can form endospores
clostridia
Common soil inhabitants that live in the anaerobic microenvironments created by aerobes consuming O2
clostridia
clostridia endospores tolerate what?
O2, heat, drying, chemicals, and irradiation
causes an antibiotic-associated diarrheal disease
Clostridioides difficile
Some are normal inhabitants of the intestinal tract of humans and
other animals
Clostridium and Clostridioides
produce lactic acid
Lactic Acid Bacteria
What kind of environment does Lactic Acid Bacteria
aerobic environments
species used to make cheese
Lactococcus
inhabit human, animal intestinal tract
Enterococcus
rod-shaped, common in mouth, vagina
Lactobacillus
Produce propionic acid via fermentation
Propionibacterium
Can also ferment lactic acid
Propionibacterium
what kind
of aerobe is Propionibacterium
Obligate anaerobe
Gram-positive pleomorphic rods
Propionibacterium
Use hydrogen sulfide or organic compounds (not water) to
make NADPH - no O2
anoxygenic phototrophs
Gram-negative; appear red, orange, or purple
Purple Bacteria
Photosynthetic apparatus in cytoplasmic membrane
Purple Bacteria
Purple Sulfur Bacteria use what as a source of electrons reducing power
H2S
where are Purple Non-Sulfur Bacteria found
Moist soils, bogs, paddy fields
Preferentially use organic molecules instead of H2S as source of electrons
Purple Non-Sulfur Bacteria
what do Purple Non-Sulfur Bacteria lack
Lack gas vesicles
Can grow aerobically in absence of light using chemotrophic metabolism
Purple Non-Sulfur Bacteria
Gram-negative; typically green or brownish
Green Bacteria
Green Sulfur Bacteria use what as a source of electrons reducing power
H2S
what kind of aerobe is Green Sulfur Bacteria
Strict anaerobes
Form multicellular arrangements
Filamentous Anoxygenic Phototrophic Bacteria
Filamentous Anoxygenic Phototrophic Bacteria use what as source of electrons for reducing power
organic compounds
Can grow in dark aerobically using
chemotrophic metabolism
Gram-positive endospore-forming rods
Heliobacterium
Earliest oxygenic phototrophs
Cyanobacteria (aka blue-green algae)
Cyanobacteria (aka blue-green algae) use what as source of electrons for reducing power
water
Cyanobacteria (aka blue-green algae) plays an essential role
primary producers
Unicellular: cocci, rods, spirals
Cyanobacteria
row of cells
trichomes
Large numbers can accumulate in freshwater habitat
bloom
absorb additional wavelengths
phycobiliproteins
convert N2 to ammonia
Nitrogen fixation
cyanobacteria critical ecologically
Nitrogen-fixing
Anabaena have specialized
heterocysts
gain energy by oxidizing
reduced inorganic chemicals
Aerobic chemolithotrophs
is Sulfurs-oxidizing bacteria Gram-negative or positive
Gram-negative
Sulfur-oxidizing bacteria gets energy from?
oxidation of sulfur, sulfur compounds including H2S, thiosulfate (generate sulfuric acid)
where are Filamentous Sulfur Oxidizers found
sulfur springs, sewage-polluted
waters, surface of marine
and freshwater sediments
Some filaments move by
gliding motility other are filaments immobile
Oxidize metal sulfides, can be used for
bioleaching
Can produce damaging acid runoff as low as pH 1.0
Unicellular Sulfur Oxidizers
are nitrifers Gram-negative or positive
Gram-negative
Oxidize inorganic nitrogen compounds for energy
Nitrifiers
Can deplete water of O2 if wastes high in ammonium
Nitrifiers
Two groups of Nitrifiers
- Ammonium oxidizers
- Nitrite oxidizers
A few are obligate chemolithotrophs
Hydrogen-Oxidizing Bacteria
where do Hydrogen-Oxidizing Bacteria live
hot springs they are Thermophillic
oxidize organic compounds for energy
Aerobic chemoorganotrophs
Found in soil, dust, skin
Obligate Aerobes
examples of Obligate Aerobes
M. luteus
genus Mycobacterium are acid-fast
bacteria and what kind of aerobe
Obligate Aerobes
in cell wall prevents Gram-staining
Mycolic acid
living on dead and decaying matter
saprophytes
resistant to disinfectants, often resistant to antimicrobial drugs
Mycobacterium
oxidase positive
Pseudomonas
Most are strict aerobes; no fermentation
Pseudomonas
where are Pseudomonas found
soil and water
Most harmless
Pseudomonas
Have unusual cell walls
Thermus and Deinococcus
how does Thermus stain
Gram-negative
how does Deinococcus stain
Gram-positive
are Thermus thermophilic
yes
are extraordinarily radiation resistant
Deinococcus
how does Corynebacterium stain
Gram-positive
is Corynebacterium harmfull or harmless
harmless
how do Enterobacteriaceae:
enterics or enterobacteria stain
Gram-negative
Facultative anaerobes that ferment glucose
Family Enterobacteriaceae:
enterics or enterobacteria
Lactose fermenters
coliforms
where are Family Enterobacteriaceae:
enterics or enterobacteria found
In intestinal tract of humans, other animals; some in soil
Normal intestinal enterobacteria microbiota
Enterobacter, Klebsiella,
Proteus, most E. coli strains
Diarrheal disease enterobacteria microbiota
Shigella, Salmonella enterica, and some E.
coli strains
Life-threatening enterobacteria
typhoid fever (Salmonella enterica serotype Typhi)
and
bubonic and pneumonic plague (Yersinia pestis)
where are Vibrio found
In marine water:
what is Sulfur-oxidizing bacteria
Aerobic chemolithotrophs
what are Nitrifiers
Aerobic chemolithotrophs
what are Micrococcus
Obligate Aerobes
what do micrococcus stain
Gram-positive
what are Mycobacterium
Obligate Aerobes
what are Pseudomonas
Obligate Aerobes
what is Thermus
Obligate Aerobes
what is Deinococcus
Obligate Aerobes
what are Corynebacterium
Facultative Anaerobes
organism is an organism that makes ATP by aerobic respiration if oxygen is present, but is capable of switching to fermentation if oxygen is absent
Facultative Anaerobes
is an organism that requires oxygen to grow.
Obligate Aerobes
organisms, primarily bacteria, that obtain energy by oxidizing inorganic compounds (like hydrogen, sulfur, or iron) using oxygen as the final electron acceptor
Aerobic chemolithotrophs
what are Enterobacteriaceae:
enterics or enterobacteria
Facultative Anaerobes
what are vibrio
Facultative Anaerobes
generate methane when they oxidize hydrogen gas as a energy source using CO2 as a terminal electron acceptor
methanogens
example of archaea extreme halophiles
halobacterium
holorubrum
natronobacterium
natronococcus
example of archaea thermophilies
methanothermus
methanopyrus
pyrodictium
pyrolobus
sulfolobus
thermophilus
picrophilus
nanoarchaeum
what are found in salt lakes, soda lakes, brines
Extreme Halophiles
Extreme Halophiles produce what pigment
pink blooms in salt water ponds
Some obtain additional energy from light via bacteriorhodopsin,
which pumps protons from cell
Chemoheterotrophs
Found near volcanic vents and fissures that release sulfurous gases,
other hot vapors
Extreme Thermophiles
main groups of Extreme Thermophiles
Methane-Generating Hyperthermophiles
Sulfur-Reducing Hyperthermophiles
Nanoarchaea
Sulfur Oxidizers
what are Sulfur-Reducing Hyperthermophiles
Obligate anaerobes
Current record holder can grow at 122 degrees Celsius
Methane-Generating Hyperthermophiles
Oxidize organic compounds, H2; Sulfur as terminal electron
acceptor; generate H2S
Sulfur-Reducing Hyperthermophiles
One of the smallest prokaryotes on Earth
Nanoarchaea
Sulfolobus species at surface of acidic sulfur-containing hot springs
Sulfur Oxidizers
what are Sulfur Oxidizers
Obligate aerobes