Chapter 1-4 Flashcards

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1
Q

Why to study biology?

A

Biology: The scientific study of life
Science: The systematic method of inquiry in search for answers
Awareness and appreciation of life
Important in every-days decisions of life

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2
Q

DNA–Blueprint of life

A

Living organisms reproduce themselves

DNA is the hereditary material of all living organisms

Reproduction of living organisms follows hereditary information

Multicellular organisms reproduce by many different means
(Seeds develop into mature plants, an egg and a sperm combine to form a new organism)

Single-celled organisms reproduce by producing two genetically identical individual cells

They use hereditary material as the basis for this reproduction

DNA is found in almost every cell of all living things
(Although some cells may not have DNA, such as red blood cells, at one point they did)

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3
Q

Development

A

Living organisms grow and develop
Organisms grow in size and complexity
Growth is directed by the organism’s DNA, which serves as a blueprint

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4
Q

Energy to persist

A

Organisms collect energy from their environment, to grow and develop
Some use the energy of sunlight
-Capture sun’s energy via photosynthesis
-Convert sunlight to chemical energy and sugars
Some use energy from other living organisms, consume plants or animals

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5
Q

Sensing the environment, sensing the inner environment

A

Homeostasis: process of maintaining internal condition

Organisms sense and respond to internal conditions

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6
Q

The Biological hierarchy low and mid level

A
Low-level
Mid-level
*Organ systems
-Heart and blood vessels
-Work together to pump blood
  • Individual organisms
  • Organ systems functioning together
  • Each system supports other systems
  • Population
  • Group of similar organisms/individuals
  • All mice living in one field
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7
Q

The Biological hierarchy High level

A

Top-level

Community

  • Groups of different species/organisms
  • Live and interact in a certain area

Ecosystems
-Communities and their physical environment

Biomes
-Large regions defined by
distinctive characteristics

Biosphere

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8
Q

Disintegration and Reconstitution

disintegration and reconstitution
versus
growth and division

A

Are they alive?

Like living organisms:

  • Contain DNA (not always)
  • Reproduce
  • Evolve
Unlike living organisms:
-Not made of cells:
(Just genetic material and protein)
-Lack homeostasis, reproduction, and energy collection
(Depend on cells to do these functions)
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9
Q

Viruses, are they organisms?

A
Influenzavirus
Lambda
Ebola virus
Orthopoxvirus
Mastadenovirus
HIV-1 virus
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10
Q

Lecture 2

A

Diversity of life

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11
Q

Characteristics of life

A

Living Organisms:

	○ Are composed of cells
	○ Reproduce using DNA
	○ Grow and develop
	○ Actively take in energy from their environment
	○ Sense their environment and respond to it
	○ Maintain constant internal conditions
	○ Can evolve as groups
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12
Q

A need for organization

A
Species
Genus
Family
Order
Class 
Phylum
Kingdom
Domain
Life
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13
Q

Evolution

A

tries to explain the relationship between different organisms on the globe.

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14
Q

Genealogist

A

Biologist who studies relationships from generation to the next.

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15
Q

Family Trees

A

Summary of relationship between related organisms

* In order to study relationships between organisms we mostly use DNA.
* Everything is written with DNA
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16
Q

Systematic:

A

Biologist who studies relationships among groups of organisms

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17
Q

Evolutionary trees:

A
  • Summary of the relationship of groups of organisms.
    • Hypothesis of evolutionary relationships.
    • May predict a behavior characteristic
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18
Q

Evolutionary convergent features:

A
  • Shared features not from common ancestor

* Shared features evolved independently

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19
Q

Evolutionary derived features:

A
  • Shared features from common ancestry
    • Descendants share features
    • Group of close relatives
    • Each level has unique shared features
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20
Q

DNA:

A
  • Appearance and function based on DNA,which serves as a blueprint
  • Show evolutionary relationships among different groups
  • Enable to compare groups with little apparent similarities (Example: comparing bacteria, plants, animals
  • Shared characteristics of DNA show relatedness between groups
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21
Q

Evolutionary trees:

A
  • Can be used to help make predictions
  • Based on shared derived features
  • Prediction of characteristics and behaviors of related organisms.
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22
Q

Linnean Hierarchy

A

• Genus: Homo
• Species: Sapiens
Subspecies: Sapiens

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23
Q

The Classification System

A
  • Kingdom: Animalia
    • Phylum: Chordata
    • Class: Mammalia
    • Order: Primates
    • Family: Homindae
    • Genus: Homo
    • Species: H. Sapiens
    • Subspecies: H. s. sapiens
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24
Q

Classification of organisms

A

Two Kindoms described by Linnaues
• Plants and animals
• Other classifications
• Five to eight kingdoms

a.) Six-Kingdom System
○ Bacteria Archea Protista Plantae Fungi Animalia

b.) Three- domain system
○ Bacteria Archaea Eukarya

**Three domains of life

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25
Q

The highest level: the domains

A

• Bacteria (Came first to world)
○ Bacteria

• Archaea (Came second to world)
	○ Archaea

• Eukarya ( came last to world.  ○ Diplomonads, Cilates and Kin, Datoms and Kin, Plants, Fungi, Animals
	○ Fungus is more similar to animal than plant.
	○ Animals latest to appear on earth. 

Fourth domain of life:
Acytota
-No cell

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26
Q

Fourth domain of life:

A

• Acytota
○ No cell
Otsi the iceman….. 5000 years old?

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27
Q

Horizantal versus vertical gene transfer

A
  • Vertical: Genes moved from generation to the next
    • Horizantal: Genes moved between lineages
    • Vertical transfer is from mother to child.
    • Genome is 7% virus and 93% human

We are 98% homologous to chimpanzees.
• We are that similar

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28
Q

Lecture 3

A

The major groups of organisms

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29
Q

The beginning of life

A

The beginning of life :
• Earth : 4.5 * 10^9 years

• Microbes: 3.5 * 10^9 years

Diversity
• 5,000 Prokaryotes
• 1,000,000 insects
Beginning of Life &raquo_space;»» Only once»»» One universal ancestor

  • universality of the genetic code
  • similarity of enzyme-catalyzed reactions

glucose to lactose reactions are very similar and by very similar enzymes

Lactobacillus

 Uses lactose for respiration
30
Q

The prokaryotes

A
Bacteria
single‑celled organisms
Archaea
Bacteria-like organisms
Extremophiles
lack nuclear membrane
31
Q

The prokaryotic cell

A

no organelles
no ‘waste’ in genetic material
divide mostly by fission

32
Q

Prokaryotic shape

A
Bacillus anthracis
Streptococcus pneumoniae
Brucella abortus
Trepanema pallidum
Vibrio cholerae
Spirillum volutans

5 x 10^30 individual organisms
the microscopic world&raquo_space;> macroscopic world
E.coli can reproduce every 20min at the right conditions

33
Q

Prokaryotes are very diverse

A

Air:
Aerobes: with oxygen
Anaerobes: without oxygen

Source of energy and carbon:

Chemo-hetero-troph

Source Source Eat
Of Of
Energy Carbon
Depends on others

34
Q

Heterotrophs

A
Class:
chemoheterotrophs
photoheterotrophs
Carbon Source:
Organic compound
Organic compound
Energy:
Organic compound
Light
35
Q

Autotrophs

A
Class:
Chemoautotrophs
Photoautotrophs
Carbon Source:
CO2
CO2
Energy:
Inorganic Compound
Light
36
Q

Protista

A

~ 30,000 species
Simplest eukaryotic organisms

First to have sex

Sexual reproduction:
DNA from two cells

Prokaryotes only use
asexual reproduction

37
Q

Protista Single cell to multi-cellular associations

A

Single cell to multi-cellular associations
Slime molds:
Single-celled stage
Multi-cellular stage

Many different diseases
Toxic ocean “blooms”—dinoflagellates
Malaria—Plasmodium

38
Q

Origin of eukaryotes

A

Organelles evolved from prokaryotes

engulfing other cells

39
Q

Plantae

A

~250,000 species
First on land
Do not move
Photoautotrophs

40
Q

Plantae energy and structure

A

Energy production:
Photosynthesis by chloroplasts

Structure:

  • Root system
  • Stem
  • Vascular system
  • Strength—cell walls
  • Cuticle—waxy coating

Producers of O2

41
Q

Plantae - Gymnosperms

A

First to evolve “Naked” seeds
Pine trees and conifers
Seed provide food before photosynthesis

42
Q

Plantae - Angiosperms

A

Protected seeds
The flower: structure for sexual reproduction
Pollination
Fruity seeds

43
Q

Fungi

A

~70,000 species
Many are decomposers

Chemoheterotrophs like animals

Different groups based on
reproductive structures

Mating types and spores

Do not perform photosynthesis

44
Q

Poisonous Fungi

A
Amanita muscaria
Amanita virosa (death angel)
Toadstools
Agaric mushroom
Galerina mushroon
45
Q

Edible Fungi

A
Truffle
Morel
Chanterelle
Champignon mushroom
Shitaki mushroom
King bolete
46
Q

The structure of the fungi

A
  • Hyphae
    • Thread-like projections
    • Cell-like compartments
    • Not fully separated like individual cells
    • Movement of organelles between compartments
  • Mycelium
    • Woven mesh of hyphae
47
Q

Animalia

A

Large, diversified group
9-10 x10^6species
Chemoheterotrophs
Multi-cellular organisms

120,000 true fly,
170,000 butterfly and moth,
360,000 beetle species

48
Q

Phylum Arthropoda

A
insects
arachnids
crustaceans 
120,000 true fly,
170,000 butterfly and moth,
360,000 beetle species

Largest diversified group
>1,5 x10^6
species

Invertebrate
Exoskeleton
Segmented body
Jointed appendages

3/4ths of all animals on Earth are insects

49
Q

Animalia-Sponges

A

Most ancient animal lineage
Loose collection of cells
Lack true tissues

A sponge is an animal

50
Q

Animalia-Cnidarians

A

Animals evolved true tissue

Example: jellyfish)
Specialized cells: Stinging cells
Specialized tissues: Nervous-,
Muscle-like, Digestive tissue

51
Q

Animals evolved organs

A

Organ:
Specialized tissues with defined boundary, characteristic size and shape

Flatworm

52
Q

Animals evolved body cavities

A

*Protostomes
First opening develops into mouth:
Insects, worms and snails

*Deuterostomes
First opening develops into anus:
Echinoderms and vertebrates

53
Q

Animals body forms

A

*Annelids
Segmented worms
*Vertebrates
Internal backbone

*Arthropods
Have an exoskeleton:
- insects
- arachnids
- crustaceans
54
Q

Animals behaviors

A

Variety of behaviors

Ability to move :

  • Capture prey
  • Eat prey
  • Avoid being capture
  • Attract mates
  • Care for young
  • Migrate to new habitats
55
Q

Fission

A

Cut self in half

56
Q

Lecture 4

A

The building blocks of life

57
Q

From atoms to molecules

A

Element: simplest building block
Atom: smallest unit of an element
Physical world composed of 92 elements

58
Q

Molecules

A

Molecule: two or more atoms linked together

Chemical compound: molecule with more than one element

59
Q

Covalent bonds

A

(e-) fill the atoms shells,
stabilizing them

strongest link

60
Q

Non-covalent bonds And Hydrogen bonds

A

*Non-covalent bonds
more abundant

*Hydrogen bonds
attraction between partial charges
hold biological molecules together

2 hydrogen atoms = 1 hydrogen molecule

61
Q

Non-covalent bonds And Ionic bonds

A

*Non-covalent bonds
more abundant

*Ionic bonds
form between charged particles (ions)

62
Q

From the atom to the organism

A

Atom&raquo_space;»» molecules in biological systems

* Carbohydrates
* Nucleic acids
* Proteins 
* Lipids
  • Carbon Hydrogen&raquo_space;»»»>Organic compounds
    • Oxygen
    • Nitrogen
    • Phosphorus
    • Suler
63
Q

Macromolecules; complex structures make living systems

A

*Macromolecule
Large molecule made of organic molecules

*Monomer
Individual unit of a macromolecule

*Polymer
Chain of monomers linked together

*Functional group
Cluster of atoms with a specific chemical function

64
Q

Composed molecules such as water

A

Human is 70%

Jelly fish is over 90%

65
Q

Molecules in biological systems: Carbohydrates

A

*Cellulose
Plant structure

*Starch
Energy storage

66
Q

Molecules in biological systems: Nucleic acids

A

Thymine only in DNA

Uracil only in RNA

67
Q

Molecules in biological systems: Proteins

A

Amino acids
Monomers that build proteins
20 amino acids

68
Q

From chain to complex 3D structure of Amino Acid

A

*Polypeptide
Long chain of amino acids
Linked through covalent/peptide bonds

*Primary sequence
Order of amino acids in the polypeptide chain

69
Q

Molecules in biological systems: Fatty acids

A

Lipids contain one or more fatty acids
Fatty acids are extremely hydrophobic chains of C and H

**unsaturated
C bonded to less H
due to double bonds

**saturated
C bonded to highest
number of H

70
Q

Triglycerides

A

Three fatty acid chains plus glycerol

Important for storage reserve

71
Q

Phospholipids

A

Major component of plasma membrane

Two fatty acid chains plus glycerol plus phosphate group

72
Q

Steroles

A

Very particular lipid molecules
Variety of important functions, such as the basis for many hormones

Four fused hydrocarbons rings, basic structure of all sterols