Cellular Energy Flashcards

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1
Q

Metabolism

A

refers to all the metabolic pathways (series of chemical reactions) that are happening in a given organism. 2 types:

1) Catabolic processes -
breaking down larger molecules for energy while

2) Anabolic processes - using energy to build
larger macromolecules.

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2
Q

To break down carbohydrates for energy, cells use either ______ or _______.

A

1) aerobic cellular respiration
(consumes oxygen, more energy produced), or
2) anaerobic cellular respiration (no oxygen
needed, but less energy produced).

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3
Q

Adenosine Triphosphate (ATP)

A
  • an RNA
    nucleoside triphosphate. It contains an adenine
    nitrogenous base linked to a ribose sugar (RNA
    nucleoside part), and three phosphate groups
    connected to the sugar (triphosphate part).
  • cellular energy currency
    because of the high energy bonds between the
    phosphate groups. These bonds release energy
    upon hydrolysis (breaking bonds), resulting in ATP
    losing a phosphate group and becoming adenosine diphosphate (ADP). Because of the additional negatively-charged phosphate group,
    ATP is less stable than ADP.
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4
Q

Reaction coupling

A

is the process of powering an energy-requiring reaction with an energy-releasing
one. It allows an unfavorable reaction to be powered by a favorable reaction, making the net Gibbs free energy negative (-ΔG = exergonic =
releases energy + spontaneous).

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5
Q

Mitochondria

A

are organelles that produce ATP through cellular respiration (catabolic process).
- have an outer membrane and an inner membrane with many infoldings called cristae.
- The intermembrane space is located between the
outer and inner membranes while the mitochondrial matrix is located inside the inner
membrane.

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6
Q

endosymbiotic theory

A

states that eukaryotes
developed when aerobic bacteria were internalized as mitochondria while the
photosynthetic bacteria became chloroplasts.

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7
Q

Evidence of Endosymbiotic Theory include similarities between mitochondria and chloroplasts:

A

● They are similar in size.
● They possess their own circular DNA.
● They have ribosomes with a large and small subunit.
● They reproduce independently of the host cell.
● They contain a double membrane.

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8
Q

Aerobic cellular respiration

A
  • performed to
    phosphorylate ADP into ATP by breaking down
    glucose and moving electrons around (oxidation
    and reduction reactions).

Aerobic cellular
respiration involves 4 catabolic processes:
1. Glycolysis
2. Pyruvate oxidation
3. Krebs cycle
4. Oxidative phosphorylation

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9
Q

Glycolysis

A

Glucose → 2 ATP + 2 NADH + 2 pyruvate

Glycolysis takes place in the cytosol and does not
require oxygen, so it is also used in fermentation.

  • Involves substrate-level phosphorylation, energy investment phase and payoff phase,
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10
Q

Substrate-level phosphorylation

A

the process
used to generate ATP in glycolysis by transferring a
phosphate group to ADP directly from a
phosphorylated compound.

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11
Q

Energy investment phase and an energy payoff phase in glycolysis:

A
  1. Hexokinase uses one ATP to phosphorylate
    glucose into glucose-6-phosphate, which
    cannot leave the cell (it becomes trapped by
    the phosphorylation).
  2. Isomerase modifies glucose-6-phosphate into
    fructose-6-phosphate.
  3. Phosphofructokinase uses a second ATP to
    phosphorylate fructose-6-phosphate into
    fructose-1,6-bisphosphate. This is the key
    regulatory step in glycolysis.
  4. Fructose-1,6-bisphosphate is broken into dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (G3P), which
    are in equilibrium with one another.
  5. G3P proceeds to the energy payoff phase so
    DHAP is constantly converted into G3P to maintain equilibrium. Thus, 1 glucose molecule will produce 2 G3P that continue into the next
    steps.
  6. G3P undergoes a series of redox reactions to
    produce 4 ATP through
    substrate-level-phosphorylation, 2 pyruvate
    and 2 NADH.

Since 2 ATP are used up in the energy investment
phase and 4 ATP are produced in the energy payoff
phase, a net of 2 ATP is produced per glucose
molecule within glycolysis.

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12
Q

Pyruvate Oxidation

A

2 pyruvate → 2 CO2 + 2 NADH + 2 acetyl-CoA

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13
Q

_________ is an enzyme that carries out the pyruvate oxidation steps.

A

Pyruvate dehydrogenase

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14
Q

Steps of Pyruvate Oxidations include:

A

1) Decarboxylation
2) Oxidation
3) Coenzyme A (CoA)

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15
Q

Decarboxylation

A
  • Pyruvate molecules (3
    carbon molecule) move from the cytosol into
    the mitochondrial matrix (stays in the cytosol
    for prokaryotes), where they undergo
    decarboxylation, producing 1 CO2 and one
    two-carbon molecule per pyruvate.
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16
Q

Oxidation

A
  • The two-carbon molecule is
    converted into an acetyl group, giving
    electrons to NAD+
    to convert it into NADH.
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17
Q

Coenzyme A (CoA)

A
  • CoA binds to the acetyl
    group, producing acetyl-CoA.
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18
Q

Krebs Cycle

A

2 acetyl-CoA → 4 CO2 + 6 NADH + 2 FADH2 + 2GTP

The Krebs cycle is also known as the citric acid
cycle or the tricarboxylic acid (TCA) cycle.

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19
Q

Like pyruvate oxidation, kreb cycle occurs in the ________
and the _______ for
prokaryotes.

A

1) Mitochondrial Matrix
2) Cytosol

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20
Q

Steps in Kreb Cycle

A
  1. Acetyl-CoA joins oxaloacetate (four-carbon)
    to form citrate (six-carbon).
  2. Citrate undergoes rearrangements that
    produce 2 CO2 and 2 NADH.
  3. After the loss of two CO2, the resulting
    four-carbon molecule produces 1 GTP through
    substrate-level phosphorylation.
  4. The molecule will now transfer electrons to 1
    FAD, which is reduced into 1 FADH2.
  5. Lastly, the molecule is converted back into
    oxaloacetate and also gives electrons to
    produce 1 NADH.
  6. Two acetyl-CoA molecules produce 4 CO2 + 6
    NADH + 2 FADH2 + 2 GTP.
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21
Q

Oxidative Phosphorylation

A

Electron carriers (NADH + FADH2) + O2 → ATP + H2O

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22
Q

________ and
________ work together to produce ATP in
oxidative phosphorylation.

A

1) electron transport chain (ETC)
2) chemiosmosis (ions moving down electrochemical gradients)

23
Q

ETC goal:

A

Regenerate electron carriers and create
an electrochemical gradient to power ATP
production.

24
Q

The ____________ is the
location of the ETC for _______ while the __________ is the location of the ETC for
___________.

A

1) mitochondrial inner membrane
2) Eukaryotes
3) Cell membrane
4) Prokaryotes

25
Q

_________ are responsible for
moving electrons through a series of
___________ reactions in the
ETC. As the series of redox reactions occurs,
__________ are pumped from the mitochondrial matrix to the intermembrane space, forming an electrochemical gradient. This is the reason the __________ is highly acidic.

A

1) Four protein complexes (I-IV)
2) oxidative/reduction
3) Protons
4) intermembrane space

26
Q

_______ is more effective than ______ and drops electrons off directly at _______, regenerating ______.

A

1) NADH
2) FADH2
3) complex-1
4) NAD+

27
Q

FADH2 drops _______ off at protein complex-II, regenerating FAD. However, this results in the pumping of ______ protons due to the bypassing of complex-I.

A

1) electrons
2) fewer

28
Q

Chemiosmosis goal:

A

Use the proton electrochemical gradient (proton-motive force) to synthesize ATP.

29
Q

ATP synthase

A

is a channel protein that provides a
hydrophilic tunnel to allow protons to flow down their electrochemical gradient (from the
intermembrane space back to the mitochondrial matrix). The spontaneous movement of protons generates energy that is used to convert ADP + Pi into ATP, a condensation reaction that is endergonic (requires energy + nonspontaneous =
+ΔG).

30
Q

ATP Yield of Aerobic Cellular Respiration

A

Aerobic respiration is exergonic, with a ΔG = -686 kcal/mol glucose.

NADH produces 3 ATP (NADH from glycolysis
produces less)*

*The 2 NADH from glycolysis produce 4-6 ATP
because a varying amount of ATP must be used to shuttle these NADH from the cytosol to the mitochondrial matrix. However, prokaryotes do not need to shuttle their NADH, so they will
produce 6 ATP.

FADH2 produces 2 ATP.
S-L = substrate-level
STAGE NET PROD YIELD NET ATP

Glycolysis 2 ATP (S-L) 2 ATP
2 NADH 4-6 ATP

2 PYR oxid 2 NADH 6 ATP

2 Kreb Cycle 2 GTP (S-L & ATP equiv.) 2ATP
6 NADH 18 ATP
2 FADH2 4 ATP

Total 36-38 ATP

31
Q

Fermentation

A

an anaerobic pathway (no oxygen) that only relies on glycolysis by converting the produced pyruvate into different molecules in order to oxidize NADH back to NAD+.

Regenerating NAD+ means glycolysis can continue to make ATP. Fermentation occurs within the cytosol. The two most common types of fermentation are lactic acid fermentation and alcohol fermentation.

2 Types:
1) Lactic Fermentation
2) Alcohol Fermentation

32
Q

Lactic acid fermentation

A

uses the 2 NADH from glycolysis to reduce the 2 pyruvate into 2 lactic acid. Thus, NADH is oxidized back to NAD+ so that glycolysis may continue. This happens frequently in muscle cells and occurs continuously in red blood
cells, which do not have mitochondria for aerobic respiration.

33
Q

Cori cycle

A

is used to help convert lactate back
into glucose once oxygen is available again. It
transports the lactate to liver cells, where it can
be oxidized back into pyruvate. Pyruvate can then be used to form glucose, which can be used for more ideal energy generation.

34
Q

Alcohol fermentation

A

uses the 2 NADH from glycolysis to convert the 2 pyruvate into 2 ethanol. Thus, NADH is oxidized back to NAD+ so that glycolysis may continue. However, this process has an extra step that first involves the decarboxylation of pyruvate into acetaldehyde, which is only then reduced by NADH into ethanol.

35
Q

Types of organisms based on ability to grow in
oxygen:

A

1) Obligate aerobes
2) Obligate anaerobes
3) Facultative anaerobes
4) Microaerophiles
5) Aerotolerant organisms

36
Q

Obligate aerobes

A
  • only perform aerobic
    respiration, so they need the presence of
    oxygen to survive.
37
Q

Obligate anaerobes

A
  • only undergo anaerobic
    respiration or fermentation; oxygen is poison
    to them.
38
Q

Facultative anaerobes

A
  • can do aerobic
    respiration, anaerobic respiration, or
    fermentation, but prefer aerobic respiration
    because it generates the most ATP.
39
Q

Microaerophiles

A
  • only perform aerobic
    respiration, but high amounts of oxygen are
    harmful to them.
40
Q

Aerotolerant organisms

A
  • only undergo anaerobic respiration or fermentation, but oxygen is not poisonous to them.
41
Q

Molecules other than ______, such as other types of _____, _____, and _____ can be
modified to enter ________ at various
stages for energy generation.

A

1) glucose
2) Carbs, fats, and proteins
3) Cellular respiration

42
Q

Other ________ mostly enter during
glycolysis. _________ describes the release of glucose-6-phosphate from glycogen, a highly branched polysaccharide of glucose. Disaccharides can undergo ______ to release two carbohydrate monomers, which can enter
glycolysis.

A

1) carbs
2) Glycogenolysis
3) hydrolysis

43
Q

_______are the preferred energy source
since they are easily catabolized and are high yield (4 kcal/gram).

A

1) Carbs

44
Q

Glycogenesis

A

refers to the reverse process - the
conversion of glucose into glycogen to be stored in the liver when energy and fuel is sufficient. Glycogen is stored in the liver and muscle cells.

45
Q

_____ are mostly present in the body as
triglycerides. ______ are required to first digest fats into ______ and _____ through a
process called _____. These digested pieces
then can be absorbed by enterocytes in the _______ and reform triglycerides.

A

1) Fats
2) lipases
3) Free FA and alcohol
4) Lipolysis
5) small intestine

46
Q

Adipocytes

A

are cells that store fat (triglycerides)
and have hormone-sensitive lipase enzymes to
help release triglycerides back into circulation as lipoproteins or as free fatty acids bound by a protein called albumin.

47
Q

Chylomicrons

A

lipoprotein transport structures
formed by the fusing of triglycerides with proteins, phospholipids, and cholesterol. They leave enterocytes and enter lacteals, small lymphatic vessels that take fats to the rest of the body.

48
Q

Low-density lipoproteins (LDLs)

A

low density of proteins, considered unhealthy because they transport cholesterol to the peripheral tissues, where it can cause vessel blockage.

49
Q

High-density lipoproteins (HDLs)

A
  • high density of proteins, considered healthy because they bring cholesterol to the liver to make bile.
50
Q

When a ______ molecule travels to the ______, it can undergo a conversion to enter glycolysis or make new glucose via _______ at the liver.

A

1) glycerol
2) liver
3) gluconeogenesis

51
Q

Free fatty acids undergo _______ to be
converted into acetyl-CoA. Beta-oxidation occurs in the _______ of eukaryotic cells and
requires an initial investment of ATP; the fatty
acid chain is then continuously cleaved to yield ________ molecules (which can be used in the Krebs cycle for ATP generation) and electron carriers (NADH + FADH2 - produces more ATP).

A

1) B-oxidation
2) mitochondrial matrix
3) two-carbon acetyl-CoA

52
Q

Proteins

A

the least desirable energy source
because the processes to get them into cellular respiration take considerable energy and proteins are needed for many essential functions in the body.

53
Q

______ are broken down into amino acids, which must first undergo _________
(removal of NH3) before being shuttled to various parts of cellular respiration.

A

1) Proteins
2) oxidative deamination

54
Q

Ammonia (NH3)

A

toxic; must be converted
into uric acid or urea depending on the species
and excreted from the body. For example, humans convert ammonia into urea, which is excreted as urine