Cell signalling Flashcards

1
Q

What are the principles of cell signalling?

A

Conversion of a message from one form into another - signal transduction.
Target cells have receptors for signalling molecules.
Most cells both generate and receive signals.

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2
Q

What are the ranges of different signals?

A

Endocrine - hormones, over long distances.
Paracrine - cells signal to near neighbours.
Neuronal
Contact-dependent - signals to direct neighbours, cell to cell contact.

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3
Q

How does direct cell-cell contact regulate cell differentiation?

A

One unspecialised epithelial cell develops into a nerve cell.
Has to tell the other cells not to develop.
Signal propagated by pair of ligand receptors - Delta and Notch - signals to neighbour not to specialise.
Found in blood vessel formation and nerve cells.

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4
Q

How does the same signal induce varying responses?

A

Depends on receptor and intracellular machinery.
Acetylcholine can act on muscle cells - affects contractility.
Salivary cells - increase production of saliva.
Skeletal muscle cell - contraction.
Cells only respond if they have appropriate receptors.

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5
Q

How does cell behaviour depend on multiple extracellular signals?

A

Cells are integrating a variety of signals.
Cells have many receptor types.
Cells respond to multiple signals simultaneously.
Different signals must be integrated by the cell.
Different combinations of signals result in different behaviour.

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6
Q

How can cell responses be fast or slow?

A

Change in contraction of heart takes milliseconds, requires all the proteins being there, and functioning differently by post-translational modification.
Cell proliferation requires new proteins to be made, takes minutes to hours.

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7
Q

How do signals enter the cells?

A

Signal comes to outside of cell, depending on its chemical nature it may or may not go through the plasma membrane.
Small, hydrophobic molecules can diffuse through - steroid hormones, cortisol.
Large, hydrophilic cannot diffuse so require receptor on cell surface.

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8
Q

How does cortisol enter the cell?

A

Cortisol can diffuse across the membrane, then binds to its nuclear receptor protein.
The activated receptor-cortisol complex moves into
nucleus, then binds to regulatory region of target gene and activates transcription.

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9
Q

How does Nitric Oxide enter cells?

A

Small, hydrophobic molecule that can diffuse across plasma membranes.
It triggers smooth muscle relaxation in blood vessel walls.

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10
Q

How do hydrophilic molecules enter the cell?

A

Primary transduction, transmission of signal from outside to inside.
Intracellular signalling molecules make changes to various effector proteins which affect cell response - metabolism, movement - cytoskeleton and gene expression.

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11
Q

What are the features of signalling pathways?

A

Primary transduction takes the signal from the outside to the inside.
Relay - spreads the signal through the cell.
Amplification - makes the signal stronger, so that a few extracellular signal molecules can result in a large intracellular response.
Integrate - Receiving more than one signalling input and
generating appropriate output.
Distribute - pass on the signal to more than one pathway.

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12
Q

What are protein kinases?

A

Phosphorylates their substrates on serine, threonine or tyrosine residues - has OH group.
ATP is used to add phosphate to add to OH. This has 2 negative charges and causes a conformational change and therefore its activity.
Can create a docking site.

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13
Q

What are protein phosphatases?

A

Phosphatases remove phosphate to switch it off.
Protein phosphorylation can:
Alter conformation and activity
Enable recruitment of effector proteins - creates a docking state.

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14
Q

How does protein phosphorylation alter the activity of proteins?

A

Can activate proteins or deactivate them.

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15
Q

How can protein kinases transduce signals?

A

Signal in to the protein causes phosphorylation.
Increases activity, protein can give out a signal, usually by modifying another protein.

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16
Q

How are GTPases important in intracellular signalling?

A

GTPases bind to GTP, causing it to be hydrolysed to GDP.
Cycle between active GTP bound and inactive GDP bound form.
Signal that activates them causes an exchange of GDP for GTP.
The active form is able to bind and activate downstream effector proteins.
Ras is a GTPase.

17
Q

What are ion-channel-coupled receptors?

A

When a ligand is bound can open or close, ions move in or out.
Results in changes in membrane potential.
Converts chemical signal into an electrical signal.
Found in nervous system and electrically excitable cells.

18
Q

What are G-Protein-coupled receptors (GPCR)?

A

Bind to signal molecule and signal through heterodimeric proteins.
Activated by proteins, peptides, amino acids, fatty acids.
This binding induces a conformational change resulting in activation of G-protein on the intracellular side of the plasma membrane.
This activates enzymes or ion channels.

19
Q

What are enzyme-coupled receptors?

A

Enzymes can be part of the receptor, or associated with it.
Mainly receptor tyrosine kinases.

20
Q

What is the structure of G proteins?

A

Consists of alpha, beta and gamma subunit.
Alpha - GTPase
Beta - GDP form
Alpha and gamma subunits are attached to plasma membrane by ligand modifications.

21
Q

How are GPCR activated?

A

Upon binding of signal molecules, conformation changes in the receptor causes conformational change in the alpha subunit resulting in exchange of GDP for GTP.
The alpha subunit dissociates from beta and gamma subunits, these stay together.
These can all activate downstream signals.

22
Q

How are GPCR deactivated?

A

Intrinsic GTPase activity of alpha subunit.
Causes hydrolysis of GTP to GDP.
Alpha subunit reassociates with the beta gamma subunit.

23
Q

How does acetylcholine signal via GPCRs?

A

Activated beta gamma complex interacts with K+ channel.
Channel goes from closed to open, affects heart contractility.
It is then switched off by beta gamma complex going back with inactive GDP bound alpha subunit, which closes the channel.

24
Q

How does GPCR signalling increase the concentration of second messengers?

A

Activation can cause increase in cyclic AMP.
Activation of phospholipase C generates diacylglycerol and inositol trisphosphate.
Inositol trisphosphate increases intracellular calcium.

25
Q

How is cyclic AMP generated?

A

Cyclic AMP is generated from ATP by adenylyl cyclase.
Adenylyl cyclase is activated by activated Gamma alpha subunit.
Cyclic AMP phosphodiesterase converts cyclic AMP to AMP, switching off the signal and allowing basal levels of cAMP to remain low.

26
Q

What are examples of cell responses mediated by cyclic AMP?

A

Adrenaline increases heart rate and force of contraction.
Adrenaline increases glycogen breakdown in skeletal muscle.
ACTH breaks down fat, produced by adrenal gland.

27
Q

How does cAMP act through Protein Kinase A?

A

Adrenaline activates G proteins
G protein interacts with adenyl cyclase, which converts AMP to cAMP.
This binds to PKA, which becomes activated, which then phosphorylates phosphorylase kinase, which phosphorylates and activates glycogen phosphorylase, which breaks down glycogen.

28
Q

What other effects can PKA have?

A

Active PKA can travel into the nucleus via NPCs, phosphorylate and activate transcription factors.
This is involved in hormone synthesis and protein production in long term memory.

29
Q

How are receptor tyrosine kinases activated?

A

When non-activated it exists as a monomer.
Epidermal growth factor causes dimerisation - by bringing together 2 receptors - this activates it.
One receptor phosphorylates tyrosine in the tail of the partner receptor.

30
Q

How does dimerisation of Receptor Tyrosine Kinases activate the kinase domain?

A

Phosphorylation of tyrosine creates a docking site, and are recruited to the receptor kinase.
The receptor can then relay the signal.

31
Q

What does Grb2 do?

A

Grb2 is an adaptor protein that binds to phospho-tyrosine and brings in the SOS protein.
SOS is a Ras activating protein, which promotes the exchange of GDP for GTP in Ras.
Ras then propagates the signal because of the conformational change when GTP is bound.

32
Q

How is Ras signalling malfunctioned?

A

Ras is the most commonly mutated oncogene in cancer.
Mutations prevent GTP hydrolysis causing it to be permanently switched on.

33
Q

What is MAP kinase signalling?

A

Activated Ras can recruit and activate the kinase Raf to the plasma membrane.
Raf phosphorylates Mek, which phosphorylates Erk.
Erk is a MAP kinase which moves into the nucleus and phosphorylates proteins required for transcription.

34
Q

What is PIP2?

A

A substrate of phospholipase 2, important for signalling.
Phospholipase 2 breaks a bond in the membrane which leaves diacylglycerol in the membrane, and inositol in the cell.
Inositol diffuses through the cytosol to the ER and causes the release of intracellular calcium.

35
Q

What are the effects of PIP2?

A

The diacylglycerol and Ca2+ released from this can activate protein kinase C.
PKA has many targets including myosin ATPase.

36
Q

What is signal intergration?

A

Cells respond to multiple signals so need to be able to integrate these.
Post-translation modifications - phosphorylation, acetylation, methylation.
The combination of phosphorylated residues dictates the response.

37
Q

How does HER2 cause breast cancer?

A

Herceptin 2 is an epidermal growth factor receptor family of receptor tyrosine kinases.
Amplification of HER2 is found in many breast cancer cells.
Trastuzumab targets the HER2 receptor to block proteolysis and downstream signalling.