Cell Signaling in Cancer_Edit Flashcards
How many human kinases are there
518
The human kinases encode for how many genes
900
How many approved kinase inhibitors
66
First tyrosine kinase inhibitor
imatinib
3 most common driver mutations in lung cancer
- unknown
- KRAS
- EGFR
(other smaller mutations: EML4-ALK, BRAF, PIK3CA, MET, ERBB2, MAP2K1, NRAS)
Major source of phosphate group that is going to be transferred by a kinase to a target protein
adenosine triphosphate (ATP)
Describe Type I Kinase Inhibitor
inhibitors bind to the active conformation of the kinase with the aspartate residue (white backbone) of the DFG motif pointing into the ATP-binding pocket.
Describe Type II Kinase Inhibitor
inhibitors bind and stabilize the inactive conformation of the kinase with the flipped aspartate residue facing outward of the binding pocket.
Describe Type III Kinase Inhibitor
inhibitors occupy an allosteric pocket outside of the ATP-binding pocket.
Describe Competitive Inhibitors
bind kinase in a reversible fashion and therefore must compete with ATP for binding.
Describe Covalent Inhibitors
tend to covalently bind with a reactive nucleophilic cysteine residue proximal to the ATP-binding site, resulting in the blockage of the ATP site and irreversible inhibition
Gefitinib is what type of inhibitor
Type 1 TKI
Gefitinib blocks
EGFR
Erlotinib blocks
EGFR
Gefitinib and Erlotinib approved for
the tx of metastatic non-small cell lung cancer (NSCLC) whose tumors have EGFR exon 19 or exon 21 (L858R) mutations
Afatinib blocks
ErbB (EGFR)
covalent inhibitor
Afatinib approved for
the tx of EGFR mutant non-small cell lung cancer (NSCLC) with EGFR mutations
Dacomitinib blocks
EGFR
covalent inhibitor
Dacomitinib approved for
non-resistant EGFR mutant lung cancer
Common EGFR Inhibitor SE
rash
associated with a good prognosis
What causes resistance to Geftinib
T790M
Osimertinib blocks
EGFR
third generation
covalent kinase inhibitor
Osimeritinib approved for
pts that acquire the T790M mutation
recent emergence of C797 mutations that abrogate covalent binding
Describe relationship between EGFR (ErbB1) and Her2 (ErbB2)
they can form a hetrodimer
When do you see Her2
amplified in breast cancer
Lapatinib is a
Her2 and EGFR inhibitor
reversible inhibitor of both EGFR and Her2
Lapatinib is selective for
the tx of Her2+ breast cancer
Lapatinib is currently approved with
Capecitabine for the tx of advanced metastatic breast cancer in pts who have progressed on other therapies
Neratinib blocks
EGFR
more favorable than gefitinib
Tucatinib is a
Her2 inhibitor
Tucatinib is selective for the tx of
Her2+ breast cancer
When use Tucatinib
SECOND line therapy (in COMBINATION with trastuzumab and capaceitabine) for the tx of advanced metastatic breast cancer in pts who have progressed on other therapies
Capmatinib is a
MET inhibitor
What is MET
receptor for hepatocyte growth factor (HGF)
fibroblast growth factor receptor (FGFR) mutationally activated in
bladder cancer
platelet derived growth factor receptor (PDGFR) mutationally activated in
gastrointestinal stromal tumors (GIST)
rearranged during transfection (RET) becomes mutationally active in
NSCLC and thyroid cancer
What is VEGFR?
Vascular Endothelial Growth Factor Receptor
critical to tumor angiogenesis
currently 7 FDA approved small molecules that inhibit VEGFR
What is CML
chronic myelogenous leukemia
What happens with CML and what is created
translocation occurs between chromosomes 9 and 22
the rearrangement of genomic material creates a fusion gene called Bcr-Abl that produces a protein (tyrosine kinase) that is thought to promote leukemia
What drug blocks the activation of the Bcr-Abl protein
Imatinib (Gleevec)
Describe the philadelphia chromosome (Ph1)
is the prototype chromosomal translocation
- Formed by joining the 5’-portion of the Bcr gene (chromosome 22) with the 3’-portion of the Abl gene (chromosome 9)
- A chimeric transcript is produced, called Bcr-Abl
- Chimeric gene is transcribed into a novel 8.5 kb mRNA
- RNA translated into a unique 210 kD protein not found in normal cells
The Ph1 chromosome is demonstrable in
> 95% of CML
Imatinib is a
Type II small molecule inhibitor of the Abl tyrosine kinase
Inhibition of the Abl tyrosine kinase results in
both reduced proliferation and enhanced apoptotic cell death in CML and GIST
Imatinib primary indication
tx of chronic myelocytic leukemia (CML)
Ponatinib inhibits
Bcr-Abl
Why is Ponatinib notable
It can inhibit the “gatekeeper” mutation T315I that is resistant to all other Bcr-Abl compounds
Imatinib and Ponatinib bind Bcr-Abl in the
“DFG out” confirmation
Acalabrutinib inhibits/blocks
BTK
also targets Cys481
covalent inhibitor
Acalabrutinib indicated for
B-cell lymphoma (Mantle cell)
What is a significant driver event in lung cancer
EML4-ALK translocation
Describe ELM4-ALK translocation
- Wild type ALK is a transmembrane receptor tyrosine kinase similar to EGFR.
- When ALK becomes inappropriately fused to ELM4 (or other genes) it become cytoplasmic and constitutively active.
- Occurs in 6% of non-small cell lung cancers
Alectinib inhibits
ALK (anaplastic lymphoma kinase)
Alectinib indicated for
the tx of patients with ALK+, metastatic non-small cell lung cancer (NSCLC) who have progressed on or are intolerant to crizotinib
Brigatinib inhibits
ALK
Brigatinib approved to treat
NSCLC that have ALK mutations
Type of mutation with melanoma
BRAF mutation
Dabrafenib blocks/inhibits
BRAF
second generation
Dabrafenib approved for use
in combination with trametinib for the tx of BRAF V600E/K-mutant metastatic melanoma
activation of wild type BRAF remains a problem, combination with trametinib seems to stem induction of squamous cell carcinomas
Trametinib blocks
MEK1 and MEK2
first approved Type III allosteric inhibitor
Trametinib indicated
in combination with dabrafenib
Trametinib NOT indicated for the tx of
pts who have received prior BRAF inhibitor therapy
What is PI3K?
Phosphoinositide 3-kinase
lipid kinase that leads to downstream activation of protein kinase B (PKB/AKT) –> a pathway critical for cancer cell survival
toxicity is a major issue for these compounds
Alpelisib is a
lipid kinase inhibitor in breast cancer
there are 4 isoforms of PI3K; the alpha isoform is mutationally activated in breast cancer
alpelisib is specific for the alpha isoform
What mutations drive the indication for Alpelisib?
PIK3CA mutations
Name 4 rapalogs
- Sirolimus
- Temsirolimus
- Everolimus
- Deforolimus
Rapamycin is also known as
sirolimus
Rapamycin analogues inhibit the function of
mTOR (mammalian target of rapamycin)
mTOR is a
serine-threonine kinase
What does rapamycin do?
inhibits immune response by blocking IL-2 signaling transduction
Everolimus inhibits
mTORC1 and NOT mTORC2 which can lead to feedback activation of Akt
Everolimus approved for
the tx of advanced renal carcinoma in pts who have failed sunitinib or sorafenib
What is one of the goals of using rapamycin analogues
this “targeted” therapy is to decrease the use of toxic chemotherapies
targeting of one aspect/pathway involved in cell growth is not likely to produce a durable response