Cell Culture Techniques Flashcards

1
Q

What is a cell culture?

A

Laboratory method (IN VITRO) by which cells are grown under controlled conditions outside of they’re natural environment.

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2
Q

What are the advantages of cell cultures?

A
  • control of the physiochemical environment (pH, temperature) and physiological environment (levels of hormone and nutrients)
  • control of micro-environment of cells (matrix, cell-cell interactions)
  • cells can be easily characterised by cytological or immune staining techniques and visualised using imaging techniques
  • cells can be stored in liquid nitrogen for long periods of time
  • cells can be easily quantified
  • reduces use of animals in scientific experiments
  • cheaper to maintain
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3
Q

What is the difference between primary tissue cells and immortalised cell lines?

A

Primary living cells:
- taking from living tissues
- limited lifespan retains cell identitiy
- pre-characterised and ready to use
- study cells with varied donor characteristics

Immortalised cell lines:
- derived from one cell
- infinite, lifespan, loses cell specifity
- from a vial with high mutations and colonal selections
- authentication required before use
- study single donor repeatedly

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4
Q

What are primary tissue cells?

A

Cells derived directly from tissue/patients, good for personalised medicine

Finite lifespan (6-7 divisions)

Cells divide and/or differentiate

Cells carry out normal functions

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5
Q

What methods of isolations are used for primary tissue cells?

A
  1. Cells allowed to migrate out of explant
  2. Mechanical (mincing, sieving, pipetting) or enzymatically (trypsin, protease, DNAase) isolate the tissue

ONLY EXCEPTION - haematopoetic cells do not need to be disaggregated - they already are as individual cells circulating blood

  1. Haematopoetic cells are separated using:
    - density centrifugation
    - immuno-purification (mixed with antibody coated magnetic beads and antigen expressing cells are isolated)
    - fluorescent activated cell sorter (FACS)
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6
Q

Give some examples of non-haematopoetic primary cells?

A
  • liver
  • skin
  • endothelial cells
  • muscle
  • nerves
  • fibroblasts
  • prostate
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7
Q

Give some examples of haematopoetix primary cells?

A
  • T cells and B cells
  • stem progenitor cells
  • dendritic cells
  • monocyte
  • neutrophils
  • erythrocytes
  • megakaryotyes
  • osteoblasts
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8
Q

What are the disadvantages of primary tissue cells?

A
  • inner patient variation
  • limited number (small amount at high cost)
  • finite lifespan and hard to maintain
  • difficult molecular manipulation
  • phenotypic instability (have different characteristics)
  • variable contamination
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9
Q

What are cell lines?

A

Immortalised cells

Less limited number of cell divisions (~30) or unlimited

Phenotypically stable, define population

Limitless availability

Easy to grow

Good reproducibility

Good model for basic science

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10
Q

What are methods for producing cell lines?

A
  1. Isolated from cancerous tissues
  2. Immortalisation of healthy primary cultures (genetic manipulation)
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11
Q

How can cell lines be produced from genetic manipulation?

A

Targeting processes that regulate cellular growth and ageing

  • p53 inactivation
  • telomerase activated
  • pRb inactivation

As cells divide over time, telomeres shorten , and eventually cell division stops (APOPTOSIS)

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12
Q

How can we inhibit the function of tumour suppressor proteins, or introduce telomerase in order to alter a cells capability for its finite number of divisions?

A

Taking advantage of viral “Oncoproteins”

SV40:
- SV40 T antigen interacts with p53 and pRb
- This can cause increased growth without loss of function of these proteins

E6+E7:
- targets p53 for degradation, and E7 binds to pRb inactivating it
USUAL METHOD

Telomerase gene can also be introduced into target primary cell - using plasmid cultures with antibiotics

SOME CELLS NEED BOTH INTRODUCTION OF TELOMERASE GENE AND INACTIVATION OF THE PRB/p53 for “immortalisation”

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13
Q

What is a 3D cultures?

A

Artificially created environment in which cells are permitted to grow or interact with their surroundings in all three dimensions

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14
Q

What are the advantages of using 3D cultures?

A
  • adhesion in all three dimensions
  • no forced polarity
  • variable stiffness
  • more relevant to human physiology
  • diffusion gradients of nutrients and waste products
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15
Q

What are the negatives of 3D cell cultures?

A
  • more complex
  • added expenses
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16
Q

What are the advantages of using 2D cell cultures?

A
  • Simple, well established
  • affordable
17
Q

What are the disadvantages of the 2D cell culture?

A
  • forced apical-based polarity
  • high stiffness
  • limited communication with other cells
  • no diffusion of gradients
  • results not relevant to human physiology
18
Q

What are the two main types of 3D cultures?

A

Spheroids
- generated from cell lines
- no cell differentiation or organisation
- usually one cell type or two max

Organoids
- derived from primary tissues
- derived from stem cells in the adult tissue
- can self organise into properly differentiated cell types and progenitors
- recapitulate come function of the organ “mini organs”

19
Q

How can organoiods allow the study of cancer drug treatment?

A

Patient derived organoids from tumour biopsy

We can treat the mini organ with different drugs to see which drugs are more effective with treating cancer cells

Can extrapolate results and make treatment decisions

20
Q

What is cell transfection?

A

The process by which foreign DNA is deliberately introduced into a eukaryotic cell through NON VIRAL METHODS including both chemical and physical methods

Always performed in 2D because in 3D the transfection might not meet all the cells

21
Q

What is lipofection?

A

A transfection technique that introduces DNA into the cell using liposomes

Liposomes are vesicles that can easily merge with cell membrane

Liposomes have a net posative charge

Liposomes can be used as potential drug carriers for drug delivery

Plasmid membrane of cells is negatively charged

22
Q

Describe what happens during lipofection?

A
  1. Interaction with the cell membrane
  2. Taken up by ENDO cytosol
  3. Release from the ENDO some
  4. Transport to the nucleus
  5. Entry to the nucleus inefficient and may need mitosis
23
Q

What is electroporation?

A

A type of transfection where a electric field is applied to the cell to increase they’re permiability, allowing drugs,DNA, to enter the cell (in plasmid)

24
Q

What is nucleofection?

A

Combination of electroporation and lipofection

Increased efficiency particularly if non-dividing cells

Technology is protected under patient

Different solution and protocols are used for each cell type.

25
Q

What is viral infection/transduction ?

A

A type of transfection that exploits the mechanism of viral infection

High transfection efficiency

Retrovirus, Adenovirus, but most commonly, lentivirus

Target cells need to express viral receptor to work

Saftey aspects to consider