Capter 8: Transcription Flashcards

1
Q

What is the purpose of transcription?

A
  • DNA to mRNA
  • Copy in the same language (nucleotides)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

How is mRNA synthesized?

A

using a DNA template

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Which enzyme is responsible for Transcription?

A

RNA polymerase

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

How does RNA polymerase read and synthesize?

A

reads 3’ to 5’
synthesizes 5’ to 3’

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Does transcription require helicase to separate the strands of DNA?

A

No

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Is a free 3’ end needed?

A

No

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What is the complementarity of mRNA?

A

A-U and G-C

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What is the template strand?

A

Template strand is the DNA strand complementary to the newly made RNA (RNA polymerase
reads this strand and adds nucleotides through complementary base pairing)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Will the newly made RNA have the
same sequence as the template
strand or the coding strand?

A

The coding strand (replaces T with U)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What does RNA polymerase do?

A
  • Enzyme that synthesizes RNA from DNA
  • Catalyzes phosphodiester bond formation between ribonucleotides
  • Synthesizes RNA from 5’ to 3’ (reads DNA template 3’ to 5’)
  • Has helicase activity that unwinds DNA at the site of transcription (does not need helicase)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What are the 3 steps of Transcription?

A
  1. Initiation
  2. Elongation
  3. Termination
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

How does initiation work?

A
  • RNApol and transcription factors(proteins) bind to the promoter
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What is the promoter?

A

Promoter: region of DNA that includes
start point and TATA box. Found on the coding strand.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What are transcription factors?

A

Transcription factors: proteins that help recruit RNA pol to gene

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

How many base pairs does RNA polymerase unwind?

A

10-20

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Can initiation happen on either strand?

17
Q

What is Elongation?

A
  • RNA pol synthesizes mRNA from 5’ to 3’
  • Reads template strand from 3’ to 5’
  • Ribonucleotides are added to the 3’ end
    5’-phosphate group of incoming nucleotide forms
    phosphodiester bond with free 3’-OH end of growing
    strand
18
Q

Is a primer needed for Elongation?

19
Q

How does termination work in prokaryotes?

A
  • RNA pol transcribes a terminator sequence, causing it to detach from the mRNA
  • mRNA is released and is immediately ready for translation!
20
Q

How does termination work in Eukaryotes?

A
  • RNA pol reaches termination sequence on template strand of DNA
  • mRNA is released as pre-mRNA
  • Pre-mRNA must be further processed before becoming mRNA by:
  • the addition of a 5’-cap
  • the addition of a poly A tail
  • Splicing
  • Processing is important for transport, stability and recognition
21
Q

What is the purpose of adding a 5’ cap to pre-mRNA?

A
  • Protects against degradation
  • Attachment of ribosomes
  • Facilitates transport out of nucleus
  • Stops RNAase from breaking it down
22
Q

What is a 5’ cap?

A

Modified guanine nucleotide is added to the 5’ end of the mRNA

23
Q

What is a poly-A tail?

A

50-200 adenine nucleotides are added to the 3’ end of the mRNA

24
Q

Why is a poly-A tail added to pre-mRNA?

A
  • Protects against degradation
  • Attachment of ribosomes
  • Facilitates transport out of the nucleus
25
What are the 2 types of sequences that make up pre-mRNA?
- Intons: non-coding sequences (exit) - Exons: coding sequences (stay)
26
What is the purpose of RNA splicing?
Introns are removed from pre-mRNA via splicing
27
What is the final mRNA structure?
5’-CAP – leader sequence (5’UTR) - Coding sequence – trailer (3’ UTR) – poly (A) tail (UTR = untranlated region) (coding sequence = start codon to stop codon)
28
How do we identify which strand is the coding and template strand?
Find the TATA box
29
Can both strands be used for transcription?
* Both strands can be used for transcription. * Both strands can be a coding or a template. * DNA is not just read from left to right. RNApol reads DNA from 3’ to 5’ on both strands. * This effectively doubles the amount of information that can be stored in DNA!!!
30
Where does transcription start?
Right after the TATAAA box