Block 2 Flashcards
IL-__ and IL-__ lead to T cells
2
7
IL-__ leads to B cells
4
do B or T cells perform somatic mutation during generation of antibody binding diversity
B
is VDJ associated with light or heavy chain of an antibody
heavy
is VJ associated with light or heavy chain of an antibody
light
what is junctional diversity during antibody generation
nucleotides are added or deleted during V(D)J recombination by Tdt enzyme to produce hypervariable regions
what is somatic hypermutation
mutations in V genes of heavy or light chains in the germinal center for B cells, with the goal to produce high affinity antibodies
*B cells only, occurs in dark zone of germinal center
what 3 enzymes are needed for
V(D) J recombination
RAG-1
RAG-2
TdT
what is the main V(D)J recombination gene
RAG
what happens if there is a decrease in TdT for V(D)J recombination
decrease in antibody diversity
what is another name for hypervariable region
complementarity determining region
what is the result of agammaglobinulinemia
inability to make antibodies
with x linked mutation causing agammaglobinemia, what gene is mutated
BTK
where is the first checkpoint in B cell receptor development
between pre-BCR and immature B
what gene segment do light chains of antibodies not have
D
what is receptor editing during B cell receptor development
if the rearranged kappa chain fails to bind, try the kappa on the chromosome from the other parent
if recombination still fails, it is tried `on the lambda chain
at the immature B cell level, if the receptor binds, signals are delivered that promote survival and there is a shutdown of what gene activity
RAG
when B cells just come out of bone marrow, they express both Ig__ and Ig__
M
D
where does isotype switch occur
germinal center light zone
what is the difference in structure between membrane bound Ig and secreted Ig
membrane bound has a hydrophobic tail that anchors it to the membrane
what enzyme associated with CD4 and CD8 mediates phosphorylation to transmit a signal
LCK
the alpha chain of T cells is similar to the __ chain of B cells, as they both are involved in VJ recombination
light
the complementarity determining region (hypervariable region) of a TCR variable region interacts with __ of an MHC molecule
peptide
in T cells, VDJ recombination occurs between __ and __
double - —> double +
weak recognition of MHC by T cells is positive or negative selection
positive
strong recognition of MHC by T cells is positive or negative selection
negative
what is Omenn syndrome caused by
RAG mutation= messed up T cells, no B cells
*diversity of proteins on the surface of B cells and T cells is severely limited, impairing the cells’ ability to recognize foreign invaders and fight infections
what is the question asked with T cell positive selection
will the cell become CD4+ or CD8+
what is the question asked with T cell negative selection
does the cell react with self
yes (strong recognition of MHC)= apoptosis
what is the difference between alphabeta and gammadelta T cells
gammadelta don’t go through selection so they aren’t as restricted
*still go through VDJ recombination
what are the 3 functions of gammadelta T cells
cytokine/chemokine production
dendritic cell maturation
antigen presenting
what accounts for no B or T cell recognizing the same antigen
variability in V region at hypervariable region (complementarity determining region)
cellular immunity is mediated by what cells
T cells
what are 2 ways in which naive T cells can enter a draining lymph node
blood
afferent lymph from an upstream lymph node
what does expression of CCR7 on dendritic cells or T cells means
can be trafficked to lymph node paracortical region
what are the 3 steps to T cell activation
- antigen presentation on class I or II MHC at antigen presenting cell surface
- co-stimulation (1 molecule on antigen presenting cell interacts with one molecule on T cell)
- production of cytokines
what is the co-stimulation molecule on naive T cells during T cell activation
CD28
what are the 2 possible co-stimulation molecule present on antigen presenting cells during T cell activation
CD80/86
B7.1/B7.2
what is the importance of Zap-70 in antigen recognition
it’s needed to get a T cell response to T cell stimulation
what is the effect of no Zap-70 in antigen recognition
abnormal T cell receptors result in low to normal CD4, and low CD8
T cells don’t respond to T cell stimulation, resulting in repeated viral infection due to lack of mature T cells
what is the function of the immune synapse
to activate protein kinase C for T cell response
an influx in what ion occurs during T cell activation
calcium
what is the result of calcium release activated channels deficiency in T cell activation
immunodeficiency due to limited T cell activation
for co-stimulation for T cell activation, what is the signal present on the antigen presenting cell
B7.1/B7.2 (CD80/CD86)
for co-stimulation for T cell activation, what is the signal present on the naive T cell
CD28
what does the presence of CD40L on T cells indicate
the T cell is an effector T cell which can boost macrophage killing or induce class switch on T cells
what is IL-2 secretion needed for
T cell proliferation
what is clonal expansion in T cells
increase then contraction of T cells in response to the number of days since infection and T cell activation
non-classical antigen presentation involves what 2 types of molecules
lipids
glycolipids
what is non-classical antigen presentation
CD1 is a surface glycoprotein that can present lipids/glycolipids to T cells instead of peptides
what T cells do CD1 glycoproteins express their glycolipid/lipid to
alphabeta T cells
gammadelta T cells
NKT cells
what type of cells are NKT cells
antigen presenting
what does it mean to say NKT cells are semi-variant
they only have one Valpha and limited Vbeta genes
NKT cells only bind with __
CD1d
NKT cells only bind with __
CD1d (recognize glycolipids and lipids)
how is the binding of a superantigen different than that of an antigen
the superantigen binds to the side of the MHC class II and beta chain of CD4+T cell leading to non-specific T cell activation and an increased immune response
what are the 4 types of effector T cells naive CD4+ T cells can become
Th1
Th2
Th17
Tfh (follicular helper)
what are the 3 possible roles of effector T cells
help B cells proliferate/differentiate to plasma cells
help promote innate activity (make macrophages kill more)
help T cells proliferate/differentiate to effector CD8+ cells
what 2 cytokines are released in response to large intracellular microbes
IL-12
IFNgamma
what class of T helper cells clear intracellular larger microbes
Th1
what cytokine is released in response to a helminths (worm) infection
IL-4
what class of T helper cells clears worm infections
Th2
what cytokines are released in response to extracellular fungi and bacteria (smaller stuff)
IL-1
IL-6
TGF-beta
IL-23
what class of T helper cells clears extracellular fungi and bacteria
Th17
what is the main cytokine that signals Th17 pathway
IL-23
what 3 cells do Th1 cells activate
macrophages
killer T cells
B cells
what 4 cells do Th2 cells activate
eosinophils
mast cells
basophils
macrophages (M2)
what cell does Th17 recruit
neutrophils
what 3 cytokines do Th1 cells secrete
IFN-gamma
TNF-alpha
IL-2
what 3 cytokines do Th2 cells secrete
IL-4
IL-5
IL-13
what is the function of IL-17 release from Th17 cells
increase neutrophil response
push inflammatory response
improve epithelial cells
Th23+IL-6+IL-1+TGF-beta–>Th__
–>continued __ response
17
inflammatory
what STAT protein is needed for Th17 response
STAT3
what is involved in hyper IgE syndrome
loss of STAT so no Th17= increased susceptibility to bacterial and fungal infections
CD8+ killer T cells are upregulated by Th__ activity
1
how does perforin/granzyme mediated cell killing work
target cell and CD8+ T cell interact and form a synapse
CD8+ cell releases perforin granules into synapse
uptake of perforin and granzyme into target cell cytosol, creating an endosome
perforin pokes hole in endosome and granzymes flow out into cell, activating caspase and apoptosis in target cell
how does Fas/Fas-L mediated cell killing work
Fas-L on CD8+ T cell interacts with Fas on target cell, triggering caspase activity and apoptosis of target cell
how can CD4+ T cells provide help to CD8+ T cells
CD4+ T cells secrete IFN-gamma, increasing activity of CD8+
once T cells are effector cells, how do they get to their destination
effector T cells upregulate different selectins/integrins depending on where they go to
what 2 cytokines are requires for memory T cell development
IL-7
IL-15
what is the difference between central and effector memory T cells
central- stay in lymph node
effector- localize where they encounter the antigen so will be quick to respond to future antigen at same site