Biomolecules and Enzymes Flashcards

1
Q

What are the four things all living things must do?

A

Obtain Materials and metabolism energy molecules
Build and Organise
Respond to the Environment
Reproduce

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2
Q

What is the function of the Endoplasmic Reticulum?

(Smooth and Rough)

(Squiggles)

A

Smooth: makes fats
Rough: makes proteins with ribosomes

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3
Q

What is the function of the Nucleus?

Centre circle

A

Stores information and (DNA) instructions

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4
Q

What is the function of the Nucleolus? (Inside the Nucleus)

Circle inside centre circle

A

It makes ribosomes

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5
Q

What is the function of the Mitochondrion?

Oval , squiggly membrane inside

A

Makes cell energy (ATP) with Cellular Respiration

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6
Q

What is the function of the Vacuoles?

Small circles - multiple

A

For storage

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7
Q

What is the function of the Lysosome?

Circle with spots

A

Contains enzymes for ‘digestion’

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8
Q

What is the function of the Centriole?

hashtag

A

For reproduction (mitosis)

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9
Q

What is the function of the Cytoskeleton?

Spikes on the membrane

A

Support and transport

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10
Q

What is the function of the Golgi Body?

What is one Golgi body called?

(Stacked blob things)

A

Transport

A Vesicle

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11
Q

What is the function of the Membrane?

A

To mean rain the shape of the cell and to protect it?

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12
Q

What are the characteristics of a Prokaryote?

A

No Nucleus (nucleotide region)
No plasmids
No membrane bound organelles

They do have a cell wall make of CARBS and FAT

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13
Q

Plants are …

A

Eukaryotic

Cell wall (carbs) 
One large vacuole
No Centrioles
Chloroplasts: capture light energy for PHOTOSYNTHESIS 
Chromoplasts: for Pigment
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14
Q

What is the structure of a membrane?

A

Phospholipid bilayer made of:

Phosphate (polar): Hydrophilic
Fatty Acids (non-polar): Hydrophpbic
Protein Channels
Carbohydrates
Cholesterol

It’s called the ‘Fluid Mosaic Model’
Flexible
Phospholipids move
Many types of components

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15
Q

Membrane Transport often relies on __________

A

Concentration gradients

Which exists if there is an uneven distribution of entities

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16
Q

If there is a gradient, what will materials do?

A

They will move to get rid of the gradient and reach equilibrium (balance)

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17
Q

What is Simple Diffusion?

Free ‘Passive’ Transport

A

Movement of entities down the gradient through the phospholipids (small and non-polar)

(High-Low)

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18
Q

What is Facilitated Diffusion?

Free ‘Passive’ Transport

A

Movement of entities down a gradient through protein (small, polar)

(It has to be small enough to fit through a protein)
(Carriers or channel)

(High-Low)

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19
Q

What are Protein Pumps?

Needs Energy ‘Active’ Transport

A
Movement of entities up the gradient
Requires energy (ATP)

(Low-High)

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20
Q

What is Vesicle Transport?

A

Endocytosis (in)
Exocytosis (out)

Receptor mediated (protein signal)

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21
Q

What is Osmosis?

A

The movement of water

Needs Aquaporins

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22
Q

What does water move towards during Osmosis?

A

Solute

High water conc. - Low water conc.

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23
Q

If a me,brand is permeable, why will water and solutes move?

A

To create Equilibrium on either side of a membrane

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24
Q

What are molecules?

A

Entities made of atoms held together by COVALENT bonds (shared electron pairs)

Ex. H2O, CO2, NH3, CH4

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25
MACROmolecules are _____
Large
26
What are Organic Molecules?
Carbon Based They also typically contain H, O Sometimes N&P
27
What are the four Biomolecules?
Carbohydrates Lipids Proteins Nucleic Acids
28
What are the subunits of biomolecules?
Monomers
29
What are multiple monomers?
Polymers
30
Carbohydrates
``` Energy molecules (glucose, sucrose, starch) Cell to cell bonding, interaction / communication Structure (cellulose, lignin, chitin) ```
31
What shapes are Carbohydrates?
⚫️____⚫️ Ring Shapes. / \. H ⚫️ C⚫️ l \ /. O H ⚫️ ____ ⚫️
32
What are the Carbohydrate subunits?
1 Subunit: Monosaccharide: Glucose or Fructose 2 Subunits: Disaccharide: Sucrose, Lactose Many ‘ ‘: Polysaccharide: Starch, Cellulose, Glycogen
33
What is the test for Monosaccharides and Disaccharides?
Benedict’s Solution
34
What is the test for polysaccharides?
Iodine
35
How are Monomers bound together?
A reaction called Dehydration Synthesis
36
Lipids
Energy Source Structure (Membranes) Communication Cholesterol Testosterone Estrogen Ex. Oils, waxes, lard
37
Lipid Subunits
Glycerol | Fatty Acids
38
Are Lipids Saturated or Unsaturated?
Either. Saturated: Every Carbon has maximum Hydrogen Unsaturated: Less Carbon - double bonds
39
What are Lipid Polymers?
Triglycerides Phospholipids
40
Nucleic Acids
How biological info is coded 2 Types DNA - double stranded RNA - ribonucleic acid - single stranded
41
What are the Nucleic acid subunits?
Nucleotides
41
What are the bases in Nucleic acids?
A,T,G or C in DNA A,U,G or C in RNA
43
Proteins
Structure (Actin, Myosin) Communication (Insulin) Transport Reaction Catalysts (enzymes)
44
What is the order of Protein ~synthesis ~
DNA —> RNA —> Amino Acids —> Proteins
47
What are the protein subunits?
Amino Acids (aka peptides)
48
Proteins =
Polypeptides
49
The four layers of protein structure
Primary - Amino acid sequence/chain Secondary - a (alpha) helixes and B (beta) sheets Tertiary - 3-D shape Quaternary - 2+ polypeptides stuck together
50
What is the test for Proteins?
Biuret Solution
51
Proteins have ______ structure
aa structure - with an R group
52
An amino acid chain is a protein’s _________
Primary Structure
53
Peptide bonds that form between amino acids are made through ______
Dehydration Synthesis
54
Protein’s secondary structure is caused by ________
Hydrogen Bonding
55
Protein Tertiary structure is what?
A special 3-D shape the polypeptide makes, it is caused by atoms on the R groups Hydrogen Bonding Disulfide Bridges
56
How does Quaternary Structure happen?
When many Polypeptides group together
57
The function of enzymes depends on what?
The proper folding of the polypeptide
58
What are Enzymes?
Proteins that catalyse reactions They don’t get used up Can be reused Reduce the activation energy of a chemical reaction
59
Lock and Key Enzyme model
The Substrate fits the enzyme exactly at the Active Site
60
Induced Fit Enzyme model
The Active Site changes to fit the Substrate
61
Enzymes are always _________ ________, they will only work with _______ __________
Enzymes are always SUBSTRATE SPECIFIC, they will only work with CERTAIN SUBSTRATES
62
What happens if enzymes change shapes?
They won’t work
63
Denaturation
Temporary change in shape (change in pH of environment, small temperature change)
64
Coagulation
Permanent change (big environment change ex. cooking an egg)
65
Enzymes are proteins which start off as a what?
An Amino Acid chain
66
What do the R groups in enzymes do?
They influence protein folding and function
67
The 3-D shape (________ _________) impacts the ______ ____ of the ______ (where it binds to the substrate)
The 3-D shape (TERTIARY STRUCTURE) impacts the ACTIVE SITE of the ENZYME (where it binds to the substrate)
68
What is it called when an enzyme and the active site are bonded together?
The Enzyme Substrate Complex
69
What will improve enzyme function?
More substrate A little more energy (heat) Ideal conditions Cofactors and co - enzymes These all improve the fit of the substrate at the active site
70
What are Cofactors?
Non-protein based eg. Iron or Zinc
71
What are Co-Enzymes?
Protein based vitamins
72
What do Cofactors and Co-Enzymes do?
They can bind at the active site or at an allosteric site, to increase enzyme function
73
What is an Allosteric site?
A site not the Active site, that changes the active site to increase enzyme function
74
What will impede enzyme function?
``` Decreased substrate concentration Low energy availability Too much energy (heat) = coagulation Non-Ideal conditions ex. (pH change) = denaturation Inhibitors ```
75
What are Competitive Inhibitors?
They bind at the active site and stop the binding of substrates (They dont’t stop all activity just slows it down)
76
What are Allosteric Inhibtors?
They change the shape of the active site
77
Regulation of Enzymes
Enzymes participate in METABOLIC PATHWAYS, which are series of reactions in an organism. We control the speed or frequency of reactions with on/of switches E1. E2. E3 A ———> B ———> C ———> D Reactant \ / Product Intermediates
78
Feedback Inhibition
A PRODUCT (or intermediate) acts to as an inhibitor, on an earlier step Ex. Product D stops enzyme 1 from working E1. E2. E3 A ———> B ———> C ———> D Reactant \ / Product Intermediates
79
Precursor Activity
A reactant is needed to activate (turn on) a latter enzyme Ex. Reactant A is needed to make Enzyme 2 work E1. E2. E3 A ———> B ———> C ———> D Reactant \ / Product Intermediates
80
What is the formula for calculating energy?
Q=mc🔺t —————— 1000